Author results

1EPV
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ALANINE RACEMASE WITH BOUND INHIBITOR DERIVED FROM D-CYCLOSERINE
Descriptor:ALANINE RACEMASE, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
Authors:Fenn, T.D., Stamper, G.F., Morollo, A.A., Ringe, D.
Deposit date:2000-03-29
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A side reaction of alanine racemase: transamination of cycloserine.
Biochemistry, 42, 2003
1MUW
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THE 0.86 ANGSTROM STRUCTURE OF XYLOSE ISOMERASE
Descriptor:XYLOSE ISOMERASE, MANGANESE (II) ION, MAGNESIUM ION, ...
Authors:Fenn, T.D., Ringe, D., Petsko, G.A.
Deposit date:2002-09-24
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Active Site Dynamics at 0.86A: Crystallographic Analysis of a Metal-Mediated Hydride Shift
To be Published
1NIU
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ALANINE RACEMASE WITH BOUND INHIBITOR DERIVED FROM L-CYCLOSERINE
Descriptor:Alanine Racemase, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
Authors:Fenn, T.D., Stamper, G.F., Morollo, A.A., Ringe, D.
Deposit date:2002-12-26
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A side reaction of alanine racemase: transamination of cycloserine.
Biochemistry, 42, 2003
1S5M
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XYLOSE ISOMERASE IN SUBSTRATE AND INHIBITOR MICHAELIS STATES: ATOMIC RESOLUTION STUDIES OF A METAL-MEDIATED HYDRIDE SHIFT
Descriptor:Xylose isomerase, ALPHA-D-GLUCOSE, MANGANESE (II) ION, ...
Authors:Fenn, T.D., Ringe, D., Petsko, G.A.
Deposit date:2004-01-21
Release date:2004-02-10
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
1S5N
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XYLOSE ISOMERASE IN SUBSTRATE AND INHIBITOR MICHAELIS STATES: ATOMIC RESOLUTION STUDIES OF A METAL-MEDIATED HYDRIDE SHIFT
Descriptor:Xylose isomerase, D-XYLITOL, MANGANESE (II) ION, ...
Authors:Fenn, T.D., Ringe, D., Petsko, G.A.
Deposit date:2004-01-21
Release date:2004-02-10
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
1XQK
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EFFECT OF A Y265F MUTANT ON THE TRANSAMINATION BASED CYCLOSERINE INACTIVATION OF ALANINE RACEMASE
Descriptor:Alanine racemase, (5-HYDROXY-4-{[(3-HYDROXYISOXAZOL-4-YL)AMINO]METHYL}-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
Authors:Fenn, T.D., Holyoak, T., Stamper, G.F., Ringe, D.
Deposit date:2004-10-12
Release date:2005-01-18
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Effect of a Y265F Mutant on the Transamination-Based Cycloserine Inactivation of Alanine Racemase
Biochemistry, 44, 2005
1XQL
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EFFECT OF A Y265F MUTANT ON THE TRANSAMINATION BASED CYCLOSERINE INACTIVATION OF ALANINE RACEMASE
Descriptor:Alanine racemase, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, (5-HYDROXY-4-{[(3-HYDROXYISOXAZOL-4-YL)AMINO]METHYL}-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, ...
Authors:Fenn, T.D., Holyoak, T., Stamper, G.F., Ringe, D.
Deposit date:2004-10-12
Release date:2005-01-18
Last modified:2018-05-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of a Y265F Mutant on the Transamination-Based Cycloserine Inactivation of Alanine Racemase
Biochemistry, 44, 2005
3QBA
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REINTRODUCING ELECTROSTATICS INTO MACROMOLECULAR CRYSTALLOGRAPHIC REFINEMENT: Z-DNA (X-RAY)
Descriptor:Z-DNA
Authors:Fenn, T.D., Schnieders, M.J., Mustyakimov, M., Wu, C., Langan, P., Pande, V.S., Brunger, A.T.
Deposit date:2011-01-12
Release date:2011-03-02
Last modified:2011-07-27
Method:X-RAY DIFFRACTION (1.53 Å), NEUTRON DIFFRACTION
Cite:Reintroducing electrostatics into macromolecular crystallographic refinement: application to neutron crystallography and DNA hydration.
Structure, 19, 2011
2RH6
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STRUCTURE OF XAC NPP FOR EVALUATION OF REFINEMENT METHODOLOGY
Descriptor:Phosphodiesterase-nucleotide pyrophosphatase, ZINC ION, ADENOSINE MONOPHOSPHATE
Authors:Zalatan, J.G., Fenn, T.D., Brunger, A.T., Hershlag, D.
Deposit date:2007-10-06
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystallographic Goodness of Fit: A New Treatment of Model Complexity
To be Published
3IPT
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CRYSTAL STRUCTURE OF KETOSTEROID ISOMERASE Y16S/D40N FROM PSEUDOMONAS PUTIDA WITH BOUND EQUILENIN
Descriptor:Steroid Delta-isomerase, EQUILENIN
Authors:Fenn, T.D., Sigala, P.A., Herschlag, D.
Deposit date:2009-08-18
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.632 Å)
Cite:Dissecting the paradoxical effects of hydrogen bond mutations in the ketosteroid isomerase oxyanion hole.
Proc.Natl.Acad.Sci.USA, 107, 2010
1OT5
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THE 2.4 ANGSTROM CRYSTAL STRUCTURE OF KEX2 IN COMPLEX WITH A PEPTIDYL-BORONIC ACID INHIBITOR
Descriptor:Kexin, Ac-Ala-Lys-boroArg N-acetylated boronic acid peptide inhibitor, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Holyoak, T., Wilson, M.A., Fenn, T.D., Kettner, C.A., Petsko, G.A., Fuller, R.S., Ringe, D.
Deposit date:2003-03-21
Release date:2003-06-17
Last modified:2016-12-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:2.4 A Resolution Crystal Structure of the Prototypical Hormone-Processing Protease Kex2 in Complex with an Ala-Lys-Arg Boronic Acid Inhibitor
Biochemistry, 42, 2003
1Z9L
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1.7 ANGSTROM CRYSTAL STRUCTURE OF THE RAT VAP-A MSP HOMOLOGY DOMAIN
Descriptor:Vesicle-associated membrane protein-associated protein A
Authors:Kaiser, S.E., Brickner, J.H., Reilein, A.R., Fenn, T.D., Walter, P., Brunger, A.T.
Deposit date:2005-04-03
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of FFAT motif-mediated ER targeting
Structure, 13, 2005
1Z9O
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1.9 ANGSTROM CRYSTAL STRUCTURE OF THE RAT VAP-A MSP HOMOLOGY DOMAIN IN COMPLEX WITH THE RAT ORP1 FFAT MOTIF
Descriptor:Vesicle-associated membrane protein-associated protein A, Oxysterol binding protein
Authors:Kaiser, S.E., Brickner, J.H., Reilein, A.R., Fenn, T.D., Walter, P., Brunger, A.T.
Deposit date:2005-04-03
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of FFAT motif-mediated ER targeting
Structure, 13, 2005
2GSN
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STRUCTURE OF XAC NUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Descriptor:phosphodiesterase-nucleotide pyrophosphatase, ZINC ION
Authors:Zalatan, J.G., Fenn, T.D., Brunger, A.T., Herschlag, D.
Deposit date:2006-04-26
Release date:2006-08-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
Biochemistry, 45, 2006
2GSO
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STRUCTURE OF XAC NUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE IN COMPLEX WITH VANADATE
Descriptor:phosphodiesterase-nucleotide pyrophosphatase, ZINC ION, VANADATE ION
Authors:Zalatan, J.G., Fenn, T.D., Brunger, A.T., Herschlag, D.
Deposit date:2006-04-26
Release date:2006-08-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
Biochemistry, 45, 2006
2GSU
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STRUCTURE OF XAC NUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE IN COMPLEX WITH AMP
Descriptor:phosphodiesterase-nucleotide pyrophosphatase, ZINC ION, ADENOSINE MONOPHOSPHATE
Authors:Zalatan, J.G., Fenn, T.D., Brunger, A.T., Herschlag, D.
Deposit date:2006-04-26
Release date:2006-08-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution
Biochemistry, 45, 2006
2PSD
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CRYSTAL STRUCTURES OF THE LUCIFERASE AND GREEN FLUORESCENT PROTEIN FROM RENILLA RENIFORMIS
Descriptor:Renilla-luciferin 2-monooxygenase, IMIDAZOLE
Authors:Loening, A.M., Fenn, T.D., Gambhir, S.S.
Deposit date:2007-05-06
Release date:2007-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
2PSE
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CRYSTAL STRUCTURES OF THE LUCIFERASE AND GREEN FLUORESCENT PROTEIN FROM RENILLA RENIFORMIS
Descriptor:Renilla-luciferin 2-monooxygenase, IMIDAZOLE
Authors:Loening, A.M., Fenn, T.D., Gambhir, S.S.
Deposit date:2007-05-06
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
2PSF
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CRYSTAL STRUCTURES OF THE LUCIFERASE AND GREEN FLUORESCENT PROTEIN FROM RENILLA RENIFORMIS
Descriptor:Renilla-luciferin 2-monooxygenase
Authors:Loening, A.M., Fenn, T.D., Gambhir, S.S.
Deposit date:2007-05-06
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
2PSH
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CRYSTAL STRUCTURES OF THE LUCIFERASE AND GREEN FLUORESCENT PROTEIN FROM RENILLA RENIFORMIS
Descriptor:Renilla-luciferin 2-monooxygenase
Authors:Loening, A.M., Fenn, T.D., Gambhir, S.S.
Deposit date:2007-05-06
Release date:2007-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
2PSJ
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CRYSTAL STRUCTURES OF THE LUCIFERASE AND GREEN FLUORESCENT PROTEIN FROM RENILLA RENIFORMIS
Descriptor:Renilla-luciferin 2-monooxygenase, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE
Authors:Loening, A.M., Fenn, T.D., Gambhir, S.S.
Deposit date:2007-05-06
Release date:2007-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
2RH7
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CRYSTAL STRUCTURES OF THE LUCIFERASE AND GREEN FLUORESCENT PROTEIN FROM RENILLA RENIFORMIS
Descriptor:Green fluorescent protein
Authors:Loening, A.M., Fenn, T.D., Gambhir, S.S.
Deposit date:2007-10-06
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis.
J.Mol.Biol., 374, 2007
3BBP
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RAB6-GTP:GCC185 RAB BINDING DOMAIN COMPLEX
Descriptor:Ras-related protein Rab-6A, GRIP and coiled-coil domain-containing protein 2, MAGNESIUM ION, ...
Authors:Schweizer Burguete, A., Fenn, T.D., Brunger, A.T., Pfeffer, S.R.
Deposit date:2007-11-09
Release date:2008-02-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185.
Cell(Cambridge,Mass.), 132, 2008
3CMR
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E. COLI ALKALINE PHOSPHATASE MUTANT R166S IN COMPLEX WITH PHOSPHATE
Descriptor:Alkaline phosphatase, ZINC ION, PHOSPHATE ION, ...
Authors:O'Brien, P.J., Lassila, J.K., Fenn, T.D., Zalatan, J.G., Herschlag, D.
Deposit date:2008-03-24
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Arginine coordination in enzymatic phosphoryl transfer: evaluation of the effect of Arg166 mutations in Escherichia coli alkaline phosphatase
Biochemistry, 47, 2008
3DYC
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STRUCTURE OF E322Y ALKALINE PHOSPHATASE IN COMPLEX WITH INORGANIC PHOSPHATE
Descriptor:Alkaline phosphatase, ZINC ION, PHOSPHATE ION
Authors:Zalatan, J.G., Fenn, T.D., Herschlag, D.
Deposit date:2008-07-25
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Comparative Enzymology in the Alkaline Phosphatase Superfamily to Determine the Catalytic Role of an Active-Site Metal Ion.
J.Mol.Biol., 384, 2008
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