Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8TAH
DownloadVisualize
BU of 8tah by Molmil
Cryo-EM structure of Cortactin-bound to Arp2/3 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1A, ...
Authors:Fregoso, F.E, van Eeuwen, T, Dominguez, R.
Deposit date:2023-06-27
Release date:2023-09-27
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Mechanism of synergistic activation of Arp2/3 complex by cortactin and WASP-family proteins.
Nat Commun, 14, 2023
5O0U
DownloadVisualize
BU of 5o0u by Molmil
Crystal structure of tarantula venom peptide Protoxin-II
Descriptor: 1,2-ETHANEDIOL, Beta/omega-theraphotoxin-Tp2a, CHLORIDE ION
Authors:Tabor, A, McCarthy, S, Reyes, F.E.
Deposit date:2017-05-17
Release date:2017-09-13
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:The Role of Disulfide Bond Replacements in Analogues of the Tarantula Toxin ProTx-II and Their Effects on Inhibition of the Voltage-Gated Sodium Ion Channel Nav1.7.
J.Am.Chem.Soc., 139, 2017
5OJJ
DownloadVisualize
BU of 5ojj by Molmil
Crystal structure of the Zn-bound ubiquitin-conjugating enzyme Ube2T
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Ubiquitin-conjugating enzyme E2 T, ...
Authors:Morreale, F.E, Testa, A, Chaugule, V.K, Bortoluzzi, A, Ciulli, A, Walden, H.
Deposit date:2017-07-21
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mind the Metal: A Fragment Library-Derived Zinc Impurity Binds the E2 Ubiquitin-Conjugating Enzyme Ube2T and Induces Structural Rearrangements.
J. Med. Chem., 60, 2017
4ER4
DownloadVisualize
BU of 4er4 by Molmil
HIGH-RESOLUTION X-RAY ANALYSES OF RENIN INHIBITOR-ASPARTIC PROTEINASE COMPLEXES
Descriptor: ENDOTHIAPEPSIN, H-142
Authors:Foundling, S.I, Watson, F.E, Szelke, M, Blundell, T.L.
Deposit date:1991-01-05
Release date:1991-04-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High resolution X-ray analyses of renin inhibitor-aspartic proteinase complexes.
Nature, 327, 1987
6OIF
DownloadVisualize
BU of 6oif by Molmil
Cryo-EM structure of human TorsinA filament
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Torsin-1A
Authors:Zheng, W, Demircioglu, F.E, Schwartz, T.U, Egelman, E.H.
Deposit date:2019-04-09
Release date:2019-07-24
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The AAA + ATPase TorsinA polymerizes into hollow helical tubes with 8.5 subunits per turn.
Nat Commun, 10, 2019
4FRN
DownloadVisualize
BU of 4frn by Molmil
Crystal structure of the cobalamin riboswitch regulatory element
Descriptor: BARIUM ION, Cobalamin riboswitch aptamer domain, Hydroxocobalamin
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4FRG
DownloadVisualize
BU of 4frg by Molmil
Crystal structure of the cobalamin riboswitch aptamer domain
Descriptor: Hydroxocobalamin, IRIDIUM (III) ION, MAGNESIUM ION, ...
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4GMA
DownloadVisualize
BU of 4gma by Molmil
Crystal structure of the adenosylcobalamin riboswitch
Descriptor: Adenosylcobalamin, Adenosylcobalamin riboswitch
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-08-15
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
2XO1
DownloadVisualize
BU of 2xo1 by Molmil
xpt-pbuX C74U Riboswitch from B. subtilis bound to N6-methyladenine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R.
Deposit date:2010-08-09
Release date:2011-04-06
Last modified:2018-06-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
3NPQ
DownloadVisualize
BU of 3npq by Molmil
Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
Descriptor: COBALT HEXAMMINE(III), S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Authors:Reyes, F.E, Edwards, A.E, Batey, R.T.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1814 Å)
Cite:Structural basis for recognition of S-adenosylhomocysteine by riboswitches.
Rna, 16, 2010
3NPN
DownloadVisualize
BU of 3npn by Molmil
Structure of the s-adenosylhomocysteine riboswitch at 3.0A
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Authors:Reyes, F.E, Edwards, A.E, Batey, R.T.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.792 Å)
Cite:Structural basis for recognition of S-adenosylhomocysteine by riboswitches.
Rna, 16, 2010
2XO0
DownloadVisualize
BU of 2xo0 by Molmil
xpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screening
Descriptor: 1,3,5-TRIAZINE-2,4-DIAMINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R.
Deposit date:2010-08-09
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
2XNZ
DownloadVisualize
BU of 2xnz by Molmil
xpt-pbuX C74U Riboswitch from B. subtilis bound to acetoguanamine identified by virtual screening
Descriptor: 6-METHYL-1,3,5-TRIAZINE-2,4-DIAMINE, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R.
Deposit date:2010-08-06
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
2XNW
DownloadVisualize
BU of 2xnw by Molmil
XPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO- TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENING
Descriptor: 3,6-diamino-1,5-dihydro[1,2,4]triazolo[4,3-b][1,2,4]triazol-4-ium, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Brenk, R.
Deposit date:2010-08-06
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
6CSF
DownloadVisualize
BU of 6csf by Molmil
Crystal structure of sodium/alanine symporter AgcS with D-alanine bound
Descriptor: D-ALANINE, Monoclonal antibody FAB heavy chain, Monoclonal antibody FAB light chain, ...
Authors:Ma, J, Reyes, F.E, Gonen, T.
Deposit date:2018-03-20
Release date:2019-01-30
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for substrate binding and specificity of a sodium-alanine symporter AgcS.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1A4J
DownloadVisualize
BU of 1a4j by Molmil
DIELS ALDER CATALYTIC ANTIBODY GERMLINE PRECURSOR
Descriptor: IMMUNOGLOBULIN, DIELS ALDER CATALYTIC ANTIBODY (HEAVY CHAIN), DIELS ALDER CATALYTIC ANTIBODY (LIGHT CHAIN)
Authors:Spiller, B.W, Romesburg, F.E, Schultz, P.G, Stevens, R.C.
Deposit date:1998-01-30
Release date:1998-05-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Immunological origins of binding and catalysis in a Diels-Alderase antibody.
Science, 279, 1998
1A4K
DownloadVisualize
BU of 1a4k by Molmil
DIELS ALDER CATALYTIC ANTIBODY WITH TRANSITION STATE ANALOGUE
Descriptor: ANTIBODY FAB, CADMIUM ION, [4-(4-ACETYLAMINO-PHENYL)-3,5-DIOXO-4-AZA-TRICYCLO[5.2.2.0 2,6]UNDEC-1-YLCARBAMOYLOXY]-ACETIC ACID
Authors:Spiller, B.W, Romesburg, F.E, Schultz, P.G, Stevens, R.C.
Deposit date:1998-01-30
Release date:1998-05-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Immunological origins of binding and catalysis in a Diels-Alderase antibody.
Science, 279, 1998
1B07
DownloadVisualize
BU of 1b07 by Molmil
CRK SH3 DOMAIN COMPLEXED WITH PEPTOID INHIBITOR
Descriptor: PHENYLETHANE, PROTEIN (PROTO-ONCOGENE CRK (CRK)), PROTEIN (SH3 PEPTOID INHIBITOR)
Authors:Nguyen, J.T, Turck, C.W, Cohen, F.E, Zuckermann, R.N, Lim, W.A.
Deposit date:1998-11-17
Release date:1999-01-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Exploiting the basis of proline recognition by SH3 and WW domains: design of N-substituted inhibitors.
Science, 282, 1998
5AMU
DownloadVisualize
BU of 5amu by Molmil
IglE I39A,Y40A,V44A
Descriptor: IGLE
Authors:Robb, C.S, Nano, F.E, Boraston, A.B.
Deposit date:2015-09-01
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure, Dimerisation and Impact on Intramacrophage Replication of Igle in Francisella Novicida
To be Published
5AMT
DownloadVisualize
BU of 5amt by Molmil
Intracellular growth locus protein E
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, IGLE
Authors:Robb, C.S, Nano, F.E, Boraston, A.B.
Deposit date:2015-09-01
Release date:2016-10-05
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Cloning, Expression, Purification, Crystallization and Preliminary X-Ray Diffraction Analysis of Intracellular Growth Locus E (Igle) Protein from Francisella Tularensis Subsp. Novicida.
Acta Crystallogr.,Sect.F, 66, 2010
7JPN
DownloadVisualize
BU of 7jpn by Molmil
Cryo-EM structure of Arpin-bound Arp2/3 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1B, ...
Authors:van Eeuwen, T, Fregoso, F.E, Dominguez, R, Zimmet, A, Boczkowska, M, Rebowski, G.
Deposit date:2020-08-09
Release date:2022-02-09
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Molecular mechanism of Arp2/3 complex inhibition by Arpin.
Nat Commun, 13, 2022
8EEY
DownloadVisualize
BU of 8eey by Molmil
Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30
Descriptor: Cas7-11, Csx29, Csx30, ...
Authors:Demircioglu, F.E, Wilkinson, M.E, Strecker, J, Li, D, Faure, G, Macrae, R.K, Zhang, F.
Deposit date:2022-09-07
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:RNA-activated protein cleavage with a CRISPR-associated endopeptidase.
Science, 378, 2022
8EEX
DownloadVisualize
BU of 8eex by Molmil
Cas7-11 in complex with Csx29
Descriptor: Cas7-11, Csx29, ZINC ION, ...
Authors:Demircioglu, F.E, Wilkinson, M.E, Strecker, J, Li, D, Faure, G, Macrae, R.K, Zhang, F.
Deposit date:2022-09-07
Release date:2022-11-16
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:RNA-activated protein cleavage with a CRISPR-associated endopeptidase.
Science, 378, 2022
1DO6
DownloadVisualize
BU of 1do6 by Molmil
CRYSTAL STRUCTURE OF SUPEROXIDE REDUCTASE IN THE OXIDIZED STATE AT 2.0 ANGSTROM RESOLUTION
Descriptor: FE (III) ION, SUPEROXIDE REDUCTASE
Authors:Yeh, A.P, Hu, Y, Jenney Junior, F.E, Adams, M.W, Rees, D.C.
Deposit date:1999-12-19
Release date:2000-03-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the superoxide reductase from Pyrococcus furiosus in the oxidized and reduced states.
Biochemistry, 39, 2000
1DYZ
DownloadVisualize
BU of 1dyz by Molmil
OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS
Descriptor: AZURIN II, COPPER (II) ION
Authors:Dodd, F.E, Abraham, Z.H.L, Eady, R.R, Hasnain, S.S.
Deposit date:2000-02-11
Release date:2000-07-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of Oxidised and Reduced Azurin II from Alcaligenes Xylosoxidans at 1.75 Angstoms Resolution
Acta Crystallogr.,Sect.D, 56, 2000

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon