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4Y2B
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BU of 4y2b by Molmil
Co-crystal structure of 3-ethyl-2-(isopropylamino)-7-(pyridin-3-yl)thieno[3,2-d]pyrimidin-4(3H)-one bound to PDE7A
Descriptor: 3-ethyl-2-(propan-2-ylamino)-7-(pyridin-3-yl)thieno[3,2-d]pyrimidin-4(3H)-one, High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A, MAGNESIUM ION, ...
Authors:Endo, Y, Kawai, K, Asano, T, Amano, S, Asanuma, Y, Sawada, K, Onodera, Y, Ueo, N, Takahashi, N, Sonoda, Y, Kamei, N, Irie, T.
Deposit date:2015-02-09
Release date:2015-04-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:2-(Isopropylamino)thieno[3,2-d]pyrimidin-4(3H)-one derivatives as selective phosphodiesterase 7 inhibitors with potent in vivo efficacy
Bioorg.Med.Chem.Lett., 25, 2015
4PM0
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BU of 4pm0 by Molmil
PDE7A catalytic domain in complex with 2-(Cyclopentylamino)thieno[3,2-d]pyrimidin-4(3H)-one derivative
Descriptor: 2-(cyclopentylamino)-3-ethyl-7-ethynylthieno[3,2-d]pyrimidin-4(3H)-one, High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A, MAGNESIUM ION, ...
Authors:Kawai, K, Endo, Y, Asano, T, Amano, S, Sawada, K, Ueo, N, Takahashi, N, Sonoda, Y, Kamei, N, Nagata, N.
Deposit date:2014-05-20
Release date:2014-12-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of 2-(Cyclopentylamino)thieno[3,2-d]pyrimidin-4(3H)-one Derivatives as a New Series of Potent Phosphodiesterase 7 Inhibitors.
J.Med.Chem., 57, 2014
2DVY
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BU of 2dvy by Molmil
Crystal structure of restriction endonucleases PabI
Descriptor: Restriction endonuclease PabI
Authors:Miyazono, K, Watanabe, M, Kamo, M, Sawasaki, T, Nagata, K, Endo, Y, Tanokura, M, Kobayashi, I.
Deposit date:2006-08-01
Release date:2007-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Novel protein fold discovered in the PabI family of restriction enzymes
Nucleic Acids Res., 35, 2007
1V2X
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BU of 1v2x by Molmil
TrmH
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
Authors:Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-17
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme
STRUCTURE, 12, 2004
3VLE
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BU of 3vle by Molmil
Crystal structure of yeast proteasome interacting protein
Descriptor: DNA mismatch repair protein HSM3
Authors:Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
Deposit date:2011-12-01
Release date:2012-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3
J.Biol.Chem., 287, 2012
3VLD
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BU of 3vld by Molmil
Crystal structure of yeast proteasome interacting protein
Descriptor: DNA mismatch repair protein HSM3
Authors:Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
Deposit date:2011-12-01
Release date:2012-02-22
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3
J.Biol.Chem., 287, 2012
3VLF
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BU of 3vlf by Molmil
Crystal structure of yeast proteasome interacting protein
Descriptor: 26S protease regulatory subunit 7 homolog, DNA mismatch repair protein HSM3
Authors:Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
Deposit date:2011-12-01
Release date:2012-02-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3
J.Biol.Chem., 287, 2012
2J3F
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BU of 2j3f by Molmil
L-ficolin complexed to N-acetyl-D-galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-21
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J60
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BU of 2j60 by Molmil
H-ficolin complexed to D-fucose
Descriptor: ACETATE ION, CALCIUM ION, FICOLIN-3, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-09-21
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J0H
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BU of 2j0h by Molmil
L-ficolin complexed to acetyl-choline
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-03
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J0Y
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BU of 2j0y by Molmil
L-ficolin complexed to b-1,3-D-glucan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-08
Release date:2007-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J3O
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BU of 2j3o by Molmil
L-ficolin complexed to N-acetyl-D-glucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-22
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J5Z
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BU of 2j5z by Molmil
H-ficolin complexed to galactose
Descriptor: ACETATE ION, CALCIUM ION, FICOLIN-3, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-09-21
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J0G
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BU of 2j0g by Molmil
L-ficolin complexed to N-acetyl-mannosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-mannopyranose, CALCIUM ION, FICOLIN-2, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-03
Release date:2007-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J2P
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BU of 2j2p by Molmil
L-ficolin complexed to N-acetyl-cystein (150mM)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-2, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-17
Release date:2007-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J61
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BU of 2j61 by Molmil
L-ficolin complexed to N-acetylglucosamine (forme C)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-2
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-09-21
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J1G
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BU of 2j1g by Molmil
L-ficolin complexed to N-acetyl-cystein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-11
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J64
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BU of 2j64 by Molmil
H-ficolin
Descriptor: CALCIUM ION, FICOLIN-3
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-09-25
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J3G
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BU of 2j3g by Molmil
L-ficolin
Descriptor: CALCIUM ION, FICOLIN-2, O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-21
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2J3U
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BU of 2j3u by Molmil
L-ficolin complexed to galactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-23
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
3VJT
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BU of 3vjt by Molmil
Vitamin D receptor complex with a carborane compound
Descriptor: 1-(2-[(R)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1
Authors:Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N.
Deposit date:2011-10-31
Release date:2012-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
3VJS
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BU of 3vjs by Molmil
Vitamin D receptor complex with a carborane compound
Descriptor: 1-(2-[(S)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1
Authors:Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N.
Deposit date:2011-10-31
Release date:2012-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011

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