Author results

4QRG
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CRYSTAL STRUCTURE OF I86L MUTANT OF PAPAIN
Descriptor:Papain, SODIUM ION, CHLORIDE ION
Authors:Dutta, S., Choudhury, D., Roy, S., Biswas, S.
Deposit date:2014-07-01
Release date:2015-08-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Pro-peptide regulates the substrate specificity and zymogen activation process of papain: A structural and mechanistic insight
To be Published
4QRV
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CRYSTAL STRUCTURE OF I86F MUTANT OF PAPAIN
Descriptor:Papain, CHLORIDE ION, SODIUM ION
Authors:Dutta, S., Choudhury, D., Roy, S.
Deposit date:2014-07-02
Release date:2015-08-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Pro-peptide regulates the substrate specificity and zymogen activation process of papain: A structural and mechanistic insight
to be published
4QRX
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CRYSTAL STRUCTURE OF PRO-PAPAIN MUTANT AT PH 4.0
Descriptor:pro-papain
Authors:Dutta, S., Choudhury, D., Roy, S., Biswas, S.
Deposit date:2014-07-02
Release date:2015-08-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.138 Å)
Cite:Pro-peptide regulates the substrate specificity and zymogen activation process of papain: A structural and mechanistic insight
to be published
3KZ0
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MCL-1 COMPLEX WITH MCL-1-SPECIFIC SELECTED PEPTIDE
Descriptor:Induced myeloid leukemia cell differentiation protein Mcl-1, Mcl-1 specific peptide MB7, ZINC ION, ...
Authors:Dutta, S., Fire, E., Grant, R.A., Sauer, R.T., Keating, A.E.
Deposit date:2009-12-07
Release date:2010-05-05
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Determinants of BH3 binding specificity for Mcl-1 versus Bcl-xL.
J.Mol.Biol., 398, 2010
1K5J
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THE CRYSTAL STRUCTURE OF NUCLEOPLASMIN-CORE
Descriptor:Nucleoplasmin Core
Authors:Dutta, S., Akey, I.V., Dingwall, C., Hartman, K.L., Laue, T., Nolte, R.T., Head, J.F., Akey, C.W.
Deposit date:2001-10-10
Release date:2001-11-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of nucleoplasmin-core: implications for histone binding and nucleosome assembly.
Mol.Cell, 8, 2001
1X9M
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T7 DNA POLYMERASE IN COMPLEX WITH AN N-2-ACETYLAMINOFLUORENE-ADDUCTED DNA
Descriptor:5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*TP*GP*GP*TP*AP*GP*TP*GP*TP*GP*AP*(2DT))-3', 5'-D(*CP*CP*CP*(8FG)P*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3', DNA polymerase, ...
Authors:Dutta, S., Li, Y., Johnson, D., Dzantiev, L., Richardson, C.C., Romano, L.J., Ellenberger, T.
Deposit date:2004-08-23
Release date:2004-10-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.USA, 101, 2004
1X9S
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T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE, CRYSTALLIZED WITH DIDEOXY-CTP AS THE INCOMING NUCLEOTIDE.
Descriptor:5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*T*GP*GP*TP*AP*GP*TP*GP*TP*GP*AP*(2DT))-3', 5'-D(*CP*CP*CP*(AFG)P*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3', DNA polymerase, ...
Authors:Dutta, S., Li, Y., Johnson, D., Dzantiev, L., Richardson, C.C., Romano, L.J., Ellenberger, T.
Deposit date:2004-08-24
Release date:2004-10-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1X9W
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T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE, CRYSTALLIZED WITH DIDEOXY-ATP AS THE INCOMING NUCLEOTIDE.
Descriptor:5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*T*GP*GP*T*AP*GP*TP*GP*TP*GP*AP*(2DT))-3', 5'-D(*CP*CP*CP*(AFG)*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3', DNA polymerase, ...
Authors:Dutta, S., Li, Y., Johnson, D., Dzantiev, L., Richardson, C.C., Romano, L.J., Ellenberger, T.
Deposit date:2004-08-24
Release date:2004-10-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.Usa, 101, 2004
2VYI
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CRYSTAL STRUCTURE OF THE TPR DOMAIN OF HUMAN SGT
Descriptor:SGTA PROTEIN
Authors:Dutta, S., Tan, Y.J.
Deposit date:2008-07-24
Release date:2008-08-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Functional Characterization of Human Sgt and its Interaction with Vpu of the Human Immunodeficiency Virus Type 1.
Biochemistry, 47, 2008
4A4D
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CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE HUMAN DEAD-BOX RNA HELICASE DDX5 (P68)
Descriptor:PROBABLE ATP-DEPENDENT RNA HELICASE DDX5
Authors:Dutta, S., Choi, Y.W., Kotaka, M., Fielding, B.C., Tan, Y.J.
Deposit date:2011-10-11
Release date:2012-08-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Variable N-Terminal Region of Ddx5 Contains Structural Elements and Auto-Inhibits its Interaction with Ns5B of Hepatitis C Virus.
Biochem.J., 446, 2012
1SKR
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T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE AND DDATP
Descriptor:5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*C*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*(2DA))-3', 5'-D(*CP*CP*CP*TP*TP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', DNA polymerase, ...
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SKS
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BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE
Descriptor:5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*C*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3', 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', DNA polymerase, ...
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SKW
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BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE
Descriptor:5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*C*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3', 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', DNA polymerase, ...
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SL0
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TERNARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
Descriptor:5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*(2DT))-3', 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', DNA polymerase, ...
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SL1
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BINARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE
Descriptor:5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*TP*(2DA))-3', 5'-D(*CP*CP*C*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', DNA polymerase, ...
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SL2
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TERNARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
Descriptor:5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*TP*(2DA))-3', 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', DNA polymerase, ...
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
4AQF
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X-RAY CRYSTALLOGRAPHIC STRUCTURE OF CRIMEAN-CONGO HAEMORRHAGIC FEVER VIRUS NUCLEOPROTEIN
Descriptor:NUCLEOPROTEIN, SULFATE ION
Authors:Wang, Y., Dutta, S., Karlberg, H., Devignot, S., Weber, F., Hao, Q., Tan, Y.J., Mirazimi, A., Kotaka, M.
Deposit date:2012-04-17
Release date:2012-09-26
Last modified:2012-10-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of Crimean-Congo Haemorraghic Fever Virus Nucleoprotein: Superhelical Homo-Oligomers and the Role of Caspase-3 Cleavage.
J.Virol., 86, 2012
4AQG
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X-RAY CRYSTALLOGRAPHIC STRUCTURE OF CRIMEAN-CONGO HAEMORRHAGIC FEVER VIRUS NUCLEOPROTEIN
Descriptor:NUCLEOPROTEIN, SULFATE ION
Authors:Wang, Y., Dutta, S., Karlberg, H., Devignot, S., Weber, F., Hao, Q., Tan, Y.J., Mirazimi, A., Kotaka, M.
Deposit date:2012-04-17
Release date:2012-09-26
Last modified:2012-10-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Crimean-Congo Haemorraghic Fever Virus Nucleoprotein: Superhelical Homo-Oligomers and the Role of Caspase-3 Cleavage.
J.Virol., 86, 2012
1NLQ
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THE CRYSTAL STRUCTURE OF DROSOPHILA NLP-CORE PROVIDES INSIGHT INTO PENTAMER FORMATION AND HISTONE BINDING
Descriptor:Nucleoplasmin-like protein, MAGNESIUM ION
Authors:Namboodiri, V.M.H., Dutta, S., Akey, I.V., Head, J.F., Akey, C.W.
Deposit date:2003-01-07
Release date:2003-03-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of Drosophila NLP-core Provides Insight into Pentamer Formation and Histone Binding
Structure, 11, 2003
1W53
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KINASE RECRUITMENT DOMAIN OF THE STRESS PHOSPHATASE RSBU
Descriptor:PHOSPHOSERINE PHOSPHATASE RSBU, GLYCEROL, XENON
Authors:Delumeau, O., Dutta, S., Brigulla, M., Kuhnke, G., Hardwick, S.W., Voelker, U., Yudkin, M.D., Lewis, R.J.
Deposit date:2004-08-05
Release date:2004-08-05
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Functional and Structural Characterization of Rsbu, a Stress Signaling Protein Phosphatase 2C
J.Biol.Chem., 279, 2004
2MCA
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NMR STRUCTURE OF THE PROTEIN YP_002937094.1 FROM EUBACTERIUM RECTALE
Descriptor:Uncharacterized protein
Authors:Proudfoot, A., Serrano, P., Geralt, M., Dutta, S., Wuthrich, K., Joint Center for Structural Genomics (JCSG)
Deposit date:2013-08-19
Release date:2013-09-04
Last modified:2013-09-11
Method:SOLUTION NMR
Cite:NMR structure of the protein YP_002937094.1 from Eubacterium rectale
To be Published
2MCT
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NMR STRUCTURE OF THE PROTEIN ZP_02042476.1 FROM RUMINOCOCCUS GNAVUS
Descriptor:Uncharacterized protein
Authors:Martin, B.T., Serrano, P., Geralt, M., Dutta, S., Wuthrich, K., Joint Center for Structural Genomics (JCSG)
Deposit date:2013-08-27
Release date:2013-11-13
Method:SOLUTION NMR
Cite:NMR structure of the protein ZP_02042476.1 from Ruminococcus gnavus.
To be Published
5JPV
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EFFICIENT TARGETING OF THE ASIALOGLYCOPROTEIN RECEPTOR BY POLYVALENT DISPLAY OF A COMPACT GALACTOSEAMINE MIMIC
Descriptor:Asialoglycoprotein receptor 1, ALPHA-LACTOSE, CALCIUM ION, ...
Authors:Liu, S.
Deposit date:2016-05-04
Release date:2017-06-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Efficient Liver Targeting by Polyvalent Display of a Compact Ligand for the Asialoglycoprotein Receptor.
J. Am. Chem. Soc., 139, 2017
5JQ1
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EFFICIENT TARGETING OF THE ASIALOGLYCOPROTEIN RECEPTOR BY POLYVALENT DISPLAY OF A COMPACT GALACTOSAMINE MIMIC
Descriptor:Asialoglycoprotein receptor 1, CALCIUM ION, N-[(1S,2R,3R,4R,5S)-2,3-dihydroxy-1-(hydroxymethyl)-6,8-dioxabicyclo[3.2.1]octan-4-yl]acetamide, ...
Authors:Liu, S.
Deposit date:2016-05-04
Release date:2017-06-14
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Efficient Liver Targeting by Polyvalent Display of a Compact Ligand for the Asialoglycoprotein Receptor.
J. Am. Chem. Soc., 139, 2017
5ZS3
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SMALL HEAT SHOCK PROTEIN FROM M. MARINUM:FORM-1
Descriptor:Molecular chaperone (Small heat shock protein), GLY-ARG-LEU-LEU-PRO, SODIUM ION, ...
Authors:Bhandari, S., Suguna, K.
Deposit date:2018-04-27
Release date:2019-01-30
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Dodecameric structure of a small heat shock protein from Mycobacterium marinum M.
Proteins, 87, 2019
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