Author results

1BYL
  • Download 1byl
  • View 1byl
Molmil generated image of 1byl
BLEOMYCIN RESISTANCE PROTEIN FROM STREPTOALLOTEICHUS HINDUSTANUS
Descriptor:PROTEIN (BLEOMYCIN RESISTANCE PROTEIN)
Authors:Dumas, P., Bergdoll, M., Cagnon, C., Masson, J.M.
Deposit date:1998-10-17
Release date:1999-10-21
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and site-directed mutagenesis of a bleomycin resistance protein and their significance for drug sequestering.
EMBO J., 13, 1994
2TRA
  • Download 2tra
  • View 2tra
Molmil generated image of 2tra
RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS
Descriptor:TRNAASP, SPERMINE, MAGNESIUM ION
Authors:Westhof, E., Dumas, P., Moras, D.
Deposit date:1987-11-06
Release date:1987-11-06
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals.
Acta Crystallogr.,Sect.A, 44, 1988
3TRA
  • Download 3tra
  • View 3tra
Molmil generated image of 3tra
RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS
Descriptor:TRNAASP, MAGNESIUM ION
Authors:Westhof, E., Dumas, P., Moras, D.
Deposit date:1987-11-06
Release date:1987-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals.
Acta Crystallogr.,Sect.A, 44, 1988
1FIR
  • Download 1fir
  • View 1fir
Molmil generated image of 1fir
CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3)
Descriptor:HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3), MAGNESIUM ION, SODIUM ION
Authors:Benas, P., Dumas, P.
Deposit date:2000-08-06
Release date:2001-01-17
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The crystal structure of HIV reverse-transcription primer tRNA(Lys,3) shows a canonical anticodon loop.
RNA, 6, 2000
1Y90
  • Download 1y90
  • View 1y90
Molmil generated image of 1y90
HIV-1 DIS(MAL) DUPLEX MN-SOAKED
Descriptor:5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MANGANESE (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-14
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
4TRA
  • Download 4tra
  • View 4tra
Molmil generated image of 4tra
RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS
Descriptor:TRNAPHE, MAGNESIUM ION
Authors:Westhof, E., Dumas, P., Moras, D.
Deposit date:1987-11-06
Release date:1987-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Restrained refinement of two crystalline forms of yeast aspartic acid and phenylalanine transfer RNA crystals.
Acta Crystallogr.,Sect.A, 44, 1988
1K9W
  • Download 1k9w
  • View 1k9w
Molmil generated image of 1k9w
HIV-1(MAL) RNA DIMERIZATION INITIATION SITE
Descriptor:HIV-1 DIS(Mal)UU RNA, MAGNESIUM ION
Authors:Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2001-10-31
Release date:2001-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site.
Nat.Struct.Biol., 8, 2001
1NLC
  • Download 1nlc
  • View 1nlc
Molmil generated image of 1nlc
HIV-1 DIS(MAL) DUPLEX ZN-SOAKED
Descriptor:HIV-1 DIS(MAL) genomic RNA, ZINC ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2003-01-07
Release date:2003-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes.
Nucleic Acids Res., 31, 2003
1O3Z
  • Download 1o3z
  • View 1o3z
Molmil generated image of 1o3z
HIV-1 DIS(MAL) DUPLEX RU HEXAMINE-SOAKED
Descriptor:HIV-1 DIS(MAL) GENOMIC RNA, MAGNESIUM ION, RUTHENIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2003-05-16
Release date:2003-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes.
Nucleic Acids Res., 31, 2003
1WVD
  • Download 1wvd
  • View 1wvd
Molmil generated image of 1wvd
HIV-1 DIS(MAL) DUPLEX COCL2-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', COBALT (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-15
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y6S
  • Download 1y6s
  • View 1y6s
Molmil generated image of 1y6s
HIV-1 DIS(MAL) DUPLEX BA-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', BARIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-07
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y6T
  • Download 1y6t
  • View 1y6t
Molmil generated image of 1y6t
HIV-1 DIS(MAL) DUPLEX CO HEXAMINE-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', COBALT (III) ION, SODIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-07
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y73
  • Download 1y73
  • View 1y73
Molmil generated image of 1y73
HIV-1 DIS(MAL) DUPLEX PT-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, PLATINUM (IV) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-08
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y95
  • Download 1y95
  • View 1y95
Molmil generated image of 1y95
HIV-1 DIS(MAL) DUPLEX PB-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, LEAD (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-14
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y99
  • Download 1y99
  • View 1y99
Molmil generated image of 1y99
HIV-1 SUBTYPE A DIS RNA DUPLEX
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION
Authors:Ennifar, E., Yusupov, M., Walter, P., Marquet, R., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2004-12-15
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges
Structure Fold.Des., 7, 1999
2B8R
  • Download 2b8r
  • View 2b8r
Molmil generated image of 2b8r
STRUCTURE OF HIV-1(LAI) GENOMIC RNA DIS
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SULFATE ION, ...
Authors:Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2005-10-10
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site
Nat.Struct.Biol., 8, 2001
2B8S
  • Download 2b8s
  • View 2b8s
Molmil generated image of 2b8s
STRUCTURE OF HIV-1(MAL) GENOMIC RNA DIS
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SULFATE ION, ...
Authors:Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2005-10-10
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site
NAT.STRUCT.BIOL., 8, 2001
2FCX
  • Download 2fcx
  • View 2fcx
Molmil generated image of 2fcx
HIV-1 DIS KISSING-LOOP IN COMPLEX WITH NEAMINE
Descriptor:HIV-1 DIS RNA, POTASSIUM ION, CHLORIDE ION, ...
Authors:Ennifar, E., Paillart, J.C., Marquet, R., Dumas, P.
Deposit date:2005-12-13
Release date:2006-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
2FCY
  • Download 2fcy
  • View 2fcy
Molmil generated image of 2fcy
HIV-1 DIS KISSING-LOOP IN COMPLEX WITH NEOMYCIN
Descriptor:HIV-1 DIS RNA, NEOMYCIN, POTASSIUM ION, ...
Authors:Ennifar, E., Paillart, J.C., Marquet, R., Dumas, P.
Deposit date:2005-12-13
Release date:2006-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
2FCZ
  • Download 2fcz
  • View 2fcz
Molmil generated image of 2fcz
HIV-1 DIS KISSING-LOOP IN COMPLEX WITH RIBOSTAMYCIN
Descriptor:HIV-1 DIS RNA, POTASSIUM ION, RIBOSTAMYCIN
Authors:Ennifar, E., Paillart, J.C., Marquet, R., Dumas, P.
Deposit date:2005-12-13
Release date:2006-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
2FD0
  • Download 2fd0
  • View 2fd0
Molmil generated image of 2fd0
HIV-1 DIS KISSING-LOOP IN COMPLEX WITH LIVIDOMYCIN
Descriptor:HIV-1 DIS RNA, (2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL, POTASSIUM ION, ...
Authors:Ennifar, E., Paillart, J.C., Marquet, R., Dumas, P.
Deposit date:2005-12-13
Release date:2006-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
2OIJ
  • Download 2oij
  • View 2oij
Molmil generated image of 2oij
HIV-1 SUBTYPE B DIS RNA EXTENDED DUPLEX AUCL3 SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', GOLD 3+ ION, POTASSIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2007-01-11
Release date:2007-02-13
Last modified:2017-05-10
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes.
Nucleic Acids Res., 31, 2003
2OIY
  • Download 2oiy
  • View 2oiy
Molmil generated image of 2oiy
CRYSTAL STRUCTURE OF THE DUPLEX FORM OF THE HIV-1(LAI) RNA DIMERIZATION INITIATION SITE
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', POTASSIUM ION, MAGNESIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2007-01-12
Release date:2007-12-25
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cation-dependent cleavage of the duplex form of the subtype-B HIV-1 RNA dimerization initiation site.
Nucleic Acids Res., 38, 2010
2OJ0
  • Download 2oj0
  • View 2oj0
Molmil generated image of 2oj0
CRYSTAL STRUCTURE OF THE DUPLEX FORM OF THE HIV-1(LAI) RNA DIMERIZATION INITIATION SITE MN SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', POTASSIUM ION, MANGANESE (II) ION, ...
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2007-01-12
Release date:2007-12-25
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cation-dependent cleavage of the duplex form of the subtype-B HIV-1 RNA dimerization initiation site.
Nucleic Acids Res., 38, 2010
3ITH
  • Download 3ith
  • View 3ith
Molmil generated image of 3ith
CRYSTAL STRUCTURE OF THE HIV-1 REVERSE TRANSCRIPTASE BOUND TO A 6-VINYLPYRIMIDINE INHIBITOR
Descriptor:Reverse transcriptase/ribonuclease H, p51 RT, 6-ethenyl-N,N-dimethyl-2-(methylsulfonyl)pyrimidin-4-amine
Authors:Freisz, S., Bec, G., Wolff, P., Dumas, P., Radi, M., Botta, M.
Deposit date:2009-08-28
Release date:2010-03-16
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of HIV-1 Reverse Transcriptase Bound to a Non-Nucleoside Inhibitor with a Novel Mechanism of Action
Angew.Chem.Int.Ed.Engl., 49, 2010
<123>
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan