Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8A3B
DownloadVisualize
BU of 8a3b by Molmil
Cryo-EM structure of mouse Pannexin 1 purified in Salipro nanoparticles
Descriptor: Pannexin-1
Authors:Drulyte, I.
Deposit date:2022-06-07
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Direct cell extraction of membrane proteins for structure-function analysis.
Sci Rep, 13, 2023
6HNM
DownloadVisualize
BU of 6hnm by Molmil
Crystal structure of IdmH 96-104 loop truncation variant
Descriptor: putative polyketide cyclase IdmH
Authors:Drulyte, I, Obajdin, J, Trinh, C, Hemsworth, G.R, Berry, A.
Deposit date:2018-09-16
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Iucrj, 6, 2019
6HNN
DownloadVisualize
BU of 6hnn by Molmil
Crystal structure of wild-type IdmH, a putative polyketide cyclase from Streptomyces antibioticus
Descriptor: Putative polyketide cyclase IdmH
Authors:Drulyte, I, Obajdin, J, Trinh, C, Hemsworth, G.R, Berry, A.
Deposit date:2018-09-16
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Iucrj, 6, 2019
6HNL
DownloadVisualize
BU of 6hnl by Molmil
Selenomethionine derivative of IdmH 96-104 loop truncation variant
Descriptor: Putative polyketide cyclase IdmH
Authors:Drulyte, I, Obajdin, J, Trinh, C, Hemsworth, G.R, Berry, A.
Deposit date:2018-09-16
Release date:2019-11-06
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Iucrj, 6, 2019
8R8D
DownloadVisualize
BU of 8r8d by Molmil
Cryo-EM structure of coagulation factor beta-XIIa in complex with the garadacimab Fab fragment (symmetric dimer)
Descriptor: Coagulation factor XII, Garadacimab heavy chain variable region, Garadacimab light chain variable region, ...
Authors:Drulyte, I.
Deposit date:2023-11-29
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for inhibition of beta-FXIIa by garadacimab
To Be Published
6Y3Y
DownloadVisualize
BU of 6y3y by Molmil
Human Coronavirus HKU1 Haemagglutinin-Esterase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin-esterase, ...
Authors:Hurdiss, D.L, Drulyte, I, Pronker, M.F.
Deposit date:2020-02-19
Release date:2020-04-08
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Cryo-EM structure of coronavirus-HKU1 haemagglutinin esterase reveals architectural changes arising from prolonged circulation in humans.
Nat Commun, 11, 2020
7AKD
DownloadVisualize
BU of 7akd by Molmil
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 47D11 neutralizing antibody heavy chain, ...
Authors:Fedry, J, Hurdiss, D.L, Wang, C, Li, W, Obal, G, Drulyte, I, Howes, S.C, van Kuppeveld, F.J.M, Foerster, F, Bosch, B.J.
Deposit date:2020-09-30
Release date:2021-05-19
Last modified:2021-06-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural insights into the cross-neutralization of SARS-CoV and SARS-CoV-2 by the human monoclonal antibody 47D11.
Sci Adv, 7, 2021
7AKJ
DownloadVisualize
BU of 7akj by Molmil
Structure of the SARS-CoV spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fedry, J, Hurdiss, D.L, Wang, C, Li, W, Obal, G, Drulyte, I, Howes, S.C, van Kuppeveld, F.J.M, Foerster, F, Bosch, B.J.
Deposit date:2020-10-01
Release date:2021-05-19
Last modified:2021-06-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the cross-neutralization of SARS-CoV and SARS-CoV-2 by the human monoclonal antibody 47D11.
Sci Adv, 7, 2021
7LCI
DownloadVisualize
BU of 7lci by Molmil
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R):Gs complex
Descriptor: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Belousoff, M.J, Johnson, R.M, Drulyte, I, Yu, L, Kotecha, A, Danev, R, Wootten, D, Zhang, X, Sexton, P.M.
Deposit date:2021-01-11
Release date:2021-01-20
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Evolving cryo-EM structural approaches for GPCR drug discovery.
Structure, 29, 2021
7LCJ
DownloadVisualize
BU of 7lcj by Molmil
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R):Gs complex
Descriptor: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor
Authors:Belousoff, M.J, Johnson, R.M, Drulyte, I, Yu, L, Kotecha, A, Danev, R, Wootten, D, Zhang, X, Sexton, P.M.
Deposit date:2021-01-11
Release date:2021-01-20
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Evolving cryo-EM structural approaches for GPCR drug discovery.
Structure, 29, 2021
7LCK
DownloadVisualize
BU of 7lck by Molmil
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R)
Descriptor: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor
Authors:Belousoff, M.J, Johnson, R.M, Drulyte, I, Yu, L, Kotecha, A, Danev, R, Wootten, D, Zhang, X, Sexton, P.M.
Deposit date:2021-01-11
Release date:2021-01-20
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Evolving cryo-EM structural approaches for GPCR drug discovery.
Structure, 29, 2021
7R40
DownloadVisualize
BU of 7r40 by Molmil
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 87G7 heavy chain variable region, ...
Authors:Hurdiss, D.L.
Deposit date:2022-02-08
Release date:2022-04-20
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:An ACE2-blocking antibody confers broad neutralization and protection against Omicron and other SARS-CoV-2 variants of concern.
Sci Immunol, 7, 2022
8BON
DownloadVisualize
BU of 8bon by Molmil
Structure of the SARS-CoV-2 spike glycoprotein in complex with the macrocyclic peptide S1B3inL1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Macrocyclic peptide S1B3inL1, ...
Authors:Hurdiss, D.L.
Deposit date:2022-11-15
Release date:2023-06-28
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A broad-spectrum macrocyclic peptide inhibitor of the SARS-CoV-2 spike protein.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OPN
DownloadVisualize
BU of 8opn by Molmil
Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (1-up state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
Authors:Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
Deposit date:2023-04-07
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OHN
DownloadVisualize
BU of 8ohn by Molmil
Human Coronavirus HKU1 spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Pronker, M.F, Hurdiss, D.L.
Deposit date:2023-03-21
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPO
DownloadVisualize
BU of 8opo by Molmil
Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (3-up state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
Authors:Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
Deposit date:2023-04-07
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023
8OPM
DownloadVisualize
BU of 8opm by Molmil
Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (closed state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-8)-N-acetyl-alpha-neuraminic acid, ...
Authors:Pronker, M.F, Creutznacher, R, Hurdiss, D.L.
Deposit date:2023-04-07
Release date:2023-08-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Sialoglycan binding triggers spike opening in a human coronavirus.
Nature, 624, 2023

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon