Author results

1AHA
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THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:ALPHA-MOMORCHARIN, ADENINE
Authors:Ren, J., Wang, Y., Dong, Y., Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1AHB
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THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:ALPHA-MOMORCHARIN, FORMYCIN-5'-MONOPHOSPHATE
Authors:Ren, J., Wang, Y., Dong, Y., Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1AHC
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THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:ALPHA-MOMORCHARIN
Authors:Ren, J., Wang, Y., Dong, Y., Stuart, D.I.
Deposit date:1994-01-07
Release date:1994-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin.
Structure, 2, 1994
1LSL
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CRYSTAL STRUCTURE OF THE THROMBOSPONDIN-1 TYPE 1 REPEATS
Descriptor:Thrombospondin 1, BETA-L-FUCOSE, ALPHA-L-FUCOSE
Authors:Tan, K., Duquette, M., Liu, J., Dong, Y., Zhang, R., Joachimiak, A., Lawler, J., Wang, J.-H.
Deposit date:2002-05-17
Release date:2002-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the TSP-1 type 1 repeats: a novel layered fold and its biological implication.
J.Cell Biol., 159, 2002
1MQ8
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CRYSTAL STRUCTURE OF ALPHAL I DOMAIN IN COMPLEX WITH ICAM-1
Descriptor:intercellular adhesion molecule-1, Integrin alpha-L, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Shimaoka, M., Xiao, T., Liu, J.-H., Yang, Y., Dong, Y., Jun, C.-D., McCormack, A., Zhang, R., Joachimiak, A., Takagi, J., Wang, J.-H., Springer, T.A.
Deposit date:2002-09-15
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of the aL I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation
Cell(Cambridge,Mass.), 112, 2003
1MQ9
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CRYSTAL STRUCTURE OF HIGH AFFINITY ALPHAL I DOMAIN WITH LIGAND MIMETIC CRYSTAL CONTACT
Descriptor:Integrin alpha-L, MANGANESE (II) ION
Authors:Shimaoka, M., Xiao, T., Liu, J.-H., Yang, Y., Dong, Y., Jun, C.-D., McCormack, A., Zhang, R., Joachimiak, A., Takagi, J., Wang, J.-H., Springer, T.A.
Deposit date:2002-09-15
Release date:2003-01-14
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the aL I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation
Cell(Cambridge,Mass.), 112, 2003
1MQA
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CRYSTAL STRUCTURE OF HIGH AFFINITY ALPHAL I DOMAIN IN THE ABSENCE OF LIGAND OR METAL
Descriptor:Integrin alpha-L
Authors:Shimaoka, T., Xiao, T., Liu, J.-H., Yang, Y., Dong, Y., Jun, C.-D., Zhang, R., Takagi, J., Wang, J.-H., Springer, T.A.
Deposit date:2002-09-15
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the aL I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation
Cell(Cambridge,Mass.), 112, 2003
1GIS
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A TRICHOSANTHIN(TCS) MUTANT(E85Q) COMPLEX STRUCTURE WITH 2'-DEOXY-ADENOSIN-5'-MONOPHOSPHATE
Descriptor:RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN, 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
Authors:Guo, Q., Liu, Y., Dong, Y., Rao, Z.
Deposit date:2001-03-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Substrate binding and catalysis in trichosanthin occur in different sites as revealed by the complex structures of several E85 mutants.
Protein Eng., 16, 2003
1GIU
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A TRICHOSANTHIN(TCS) MUTANT(E85R) COMPLEX STRUCTURE WITH ADENINE
Descriptor:RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN, ADENINE
Authors:Guo, Q., Liu, Y., Dong, Y., Rao, Z.
Deposit date:2001-03-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate binding and catalysis in trichosanthin occur in different sites as revealed by the complex structures of several E85 mutants.
Protein Eng., 16, 2003
1REO
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L-AMINO ACID OXIDASE FROM AGKISTRODON HALYS PALLAS
Descriptor:AHPLAAO, N-ACETYL-D-GLUCOSAMINE, 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE, ...
Authors:Zhang, H., Teng, M., Niu, L., Wang, Y., Wang, Y., Liu, Q., Huang, Q., Hao, Q., Dong, Y., Liu, P.
Deposit date:2003-11-07
Release date:2004-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Purification, partial characterization, crystallization and structural determination of AHP-LAAO, a novel L-amino-acid oxidase with cell apoptosis-inducing activity from Agkistrodon halys pallas venom.
Acta Crystallogr.,Sect.D, 60, 2004
1P9E
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CRYSTAL STRUCTURE ANALYSIS OF METHYL PARATHION HYDROLASE FROM PSEUDOMONAS SP WBC-3
Descriptor:Methyl Parathion Hydrolase, ZINC ION, POTASSIUM ION, ...
Authors:Dong, Y., Sun, L., Bartlam, M., Rao, Z., Zhang, X.
Deposit date:2003-05-11
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Analysis of Methyl Parathion Hydrolase from Pseudomonas sp WBC-3
To be Published
1P5J
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN SERINE DEHYDRATASE
Descriptor:L-serine dehydratase, PYRIDOXAL-5'-PHOSPHATE
Authors:Sun, L., Liu, Y., Rao, Z.
Deposit date:2003-04-27
Release date:2004-06-01
Last modified:2018-07-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallization and preliminary crystallographic analysis of human serine dehydratase.
Acta Crystallogr.,Sect.D, 59, 2003
1W24
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CRYSTAL STRUCTURE OF HUMAN VPS29
Descriptor:VACUOLAR PROTEIN SORTING PROTEIN 29
Authors:Wang, D., Guo, M., Teng, M., Niu, L.
Deposit date:2004-06-26
Release date:2005-03-23
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Human Vacuolar Protein Sorting Protein 29 Reveals a Phosphodiesterase/Nuclease-Like Fold and Two Protein-Protein Interaction Sites.
J.Biol.Chem., 280, 2005
2EXX
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CRYSTAL STRUCTURE OF HSCARG FROM HOMO SAPIENS IN COMPLEX WITH NADP
Descriptor:HSCARG protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, GLYCEROL
Authors:Dai, X., Chen, Q., Yao, D., Liang, Y., Dong, Y., Gu, X., Zheng, X., Luo, M.
Deposit date:2005-11-09
Release date:2006-11-21
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Restructuring of the dinucleotide-binding fold in an NADP(H) sensor protein.
Proc.Natl.Acad.Sci.USA, 104, 2007
3KUY
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DNA STRETCHING IN THE NUCLEOSOME FACILITATES ALKYLATION BY AN INTERCALATING ANTITUMOR AGENT
Descriptor:Histone H3.2, Histone H4, Histone H2A, ...
Authors:Wu, B., Davey, C.A.
Deposit date:2009-11-28
Release date:2010-01-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:DNA stretching in the nucleosome facilitates alkylation by an intercalating antitumour agent
Nucleic Acids Res., 38, 2010
3N9L
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CEKDM7A FROM C.ELEGANS, COMPLEX WITH H3K4ME3 PEPTIDE AND NOG
Descriptor:Putative uncharacterized protein, Histone H3 peptide, FE (II) ION, ...
Authors:Yang, Y., Hu, L., Wang, P., Hou, H., Chen, C.D., Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3N9M
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CEKDM7A FROM C.ELEGANS, ALONE
Descriptor:Putative uncharacterized protein, FE (II) ION, ZINC ION
Authors:Yang, Y., Hu, L., Wang, P., Hou, H., Chen, C.D., Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3N9N
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CEKDM7A FROM C.ELEGANS, COMPLEX WITH H3K4ME3K9ME2 PEPTIDE AND NOG
Descriptor:Putative uncharacterized protein, Histone H3 peptide, FE (II) ION, ...
Authors:Yang, Y., Hu, L., Wang, P., Hou, H., Chen, C.D., Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3N9O
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CEKDM7A FROM C.ELEGANS, COMPLEX WITH H3K4ME3 PEPTIDE, H3K9ME2 PEPTIDE AND NOG
Descriptor:Putative uncharacterized protein, Histone H3 peptide, FE (II) ION, ...
Authors:Yang, Y., Hu, L., Wang, P., Hou, H., Chen, C.D., Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3N9P
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CEKDM7A FROM C.ELEGANS, COMPLEX WITH H3K4ME3K27ME2 PEPTIDE AND NOG
Descriptor:Putative uncharacterized protein, Histone H3 peptide, FE (II) ION, ...
Authors:Yang, Y., Hu, L., Wang, P., Hou, H., Chen, C.D., Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3N9Q
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CEKDM7A FROM C.ELEGANS, COMPLEX WITH H3K4ME3 PEPTIDE, H3K27ME2 PEPTIDE AND NOG
Descriptor:Putative uncharacterized protein, Histone H3 peptide, FE (II) ION, ...
Authors:Yang, Y., Hu, L., Wang, P., Hou, H., Chen, C.D., Xu, Y.
Deposit date:2010-05-31
Release date:2010-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Cell Res., 20, 2010
3O5X
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CRYSTAL STRUCTURE OF THE ONCOGENIC TYROSINE PHOSPHATASE SHP2 COMPLEXED WITH A SALICYLIC ACID-BASED SMALL MOLECULE INHIBITOR
Descriptor:Tyrosine-protein phosphatase non-receptor type 11, 3-{1-[3-(biphenyl-4-ylamino)-3-oxopropyl]-1H-1,2,3-triazol-4-yl}-6-hydroxy-1-methyl-2-phenyl-1H-indole-5-carboxylic acid
Authors:Zhang, Z.-Y., Zhang, X., He, Y., Liu, S., Yu, Z., Jiang, Z., Yang, Z., Dong, Y., Nabinger, S.C., Wu, L., Gunawan, A.M., Wang, L., Chan, R.J.
Deposit date:2010-07-28
Release date:2010-08-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Salicylic acid based small molecule inhibitor for the oncogenic Src homology-2 domain containing protein tyrosine phosphatase-2 (SHP2).
J.Med.Chem., 53, 2010
2LH8
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SYRIAN HAMSTER PRION PROTEIN WITH THIAMINE
Descriptor:Major prion protein, 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM
Authors:Perez-Pineiro, R., Bjorndahl, T.C., Berjanskii, M., Hau, D., Li, L., Huang, A., Lee, R., Gibbs, E., Ladner, C., Wei Dong, Y., Abera, A., Cashman, N.R., Wishart, D.
Deposit date:2011-08-05
Release date:2011-09-14
Last modified:2011-11-30
Method:SOLUTION NMR
Cite:The prion protein binds thiamine.
Febs J., 278, 2011
3RZ2
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CRYSTAL OF PRL-1 COMPLEXED WITH PEPTIDE
Descriptor:Protein tyrosine phosphatase type IVA 1, Prl-1 (PTP4A1)
Authors:Zhang, Z.-Y., Liu, D., Bai, Y.
Deposit date:2011-05-11
Release date:2011-10-26
Last modified:2014-10-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:PRL-1 protein promotes ERK1/2 and RhoA protein activation through a non-canonical interaction with the Src homology 3 domain of p115 Rho GTPase-activating protein.
J.Biol.Chem., 286, 2011
3Q5M
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI BAMD
Descriptor:UPF0169 lipoprotein yfiO, IODIDE ION
Authors:Dong, C., Hou, H., Yang, X., Dong, Y., Shen, Y.
Deposit date:2010-12-28
Release date:2011-12-28
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structure of Escherichia coli BamD and its functional implications in outer membrane protein assembly
Acta Crystallogr.,Sect.D, 68, 2012