Author results

2YJY
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A SPECIFIC AND MODULAR BINDING CODE FOR CYTOSINE RECOGNITION IN PUF DOMAINS
Descriptor:PUMILIO HOMOLOG 1, 5'-R(*AP*UP*UP*GP*CP*AP*UP*AP*UP*AP)-3'
Authors:Dong, S., Wang, Y., Cassidy-Amstutz, C., Lu, G., Qiu, C., Bigler, R., Jezyk, M., Li, C., Hall, T.M.T., Wang, Z.
Deposit date:2011-05-24
Release date:2011-06-08
Last modified:2015-10-28
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Specific and Modular Binding Code for Cytosine Recognition in Pumilio/Fbf (Puf) RNA-Binding Domains.
J.Biol.Chem., 286, 2011
4Q8K
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CRYSTAL STRUCTURE OF POLYSACCHARIDE LYASE FAMILY 18 ALY-SJ02 P-CATD
Descriptor:Alginase, CALCIUM ION, SULFATE ION
Authors:Dong, S., Li, C.Y., Zhang, Y.Z.
Deposit date:2014-04-28
Release date:2014-09-17
Last modified:2015-11-25
Method:X-RAY DIFFRACTION (1.646 Å)
Cite:Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.
J.Biol.Chem., 289, 2014
4Q8L
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CRYSTAL STRUCTURE OF POLYSACCHRIDE LYASE FAMILY 18 ALY-SJ02 R-CATD
Descriptor:Alginase, CALCIUM ION
Authors:Dong, S., Li, C.Y., Zhang, Y.Z.
Deposit date:2014-04-28
Release date:2014-09-17
Last modified:2015-11-25
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18.
J.Biol.Chem., 289, 2014
5YJ7
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STRUCTURAL INSIGHT INTO THE BETA-GH1 GLUCOSIDASE BGLN1 FROM OLEAGINOUS MICROALGAE NANNOCHLOROPSIS
Descriptor:Glycoside hydrolase, CALCIUM ION, GLYCEROL
Authors:Dong, S., Liu, Y.J., Zhou, H.X., Xiao, Y., Xu, J., Cui, Q., Wang, X.Q., Feng, Y.G.
Deposit date:2017-10-09
Release date:2018-10-10
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae Nannochloropsis
To Be Published
5ZMU
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CRYSTAL STRUCTURE OF A CIS-EPOXYSUCCINATE HYDROLASE PRODUCING D(-)-TARTARIC ACIDS
Descriptor:Cis-epoxysuccinate hydrolase, ZINC ION
Authors:Dong, S., Liu, X., Wang, X., Feng, Y.
Deposit date:2018-04-06
Release date:2018-08-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insight into the catalytic mechanism of a cis-epoxysuccinate hydrolase producing enantiomerically pure d(-)-tartaric acid.
Chem. Commun. (Camb.), 54, 2018
5ZMY
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CRYSTAL STRUCTURE OF A CIS-EPOXYSUCCINATE HYDROLASE PRODUCING D(-)-TARTARIC ACIDS
Descriptor:Cis-epoxysuccinate hydrolase, ZINC ION, D(-)-TARTARIC ACID
Authors:Dong, S., Liu, X., Wang, X., Feng, Y.
Deposit date:2018-04-06
Release date:2018-08-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural insight into the catalytic mechanism of a cis-epoxysuccinate hydrolase producing enantiomerically pure d(-)-tartaric acid.
Chem. Commun. (Camb.), 54, 2018
5XJN
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CYTOCHROME P450 CREJ IN COMPLEX WITH (4-ETHYLPHENYL) DIHYDROGEN PHOSPHATE
Descriptor:Cytochrome P450, (4-ethylphenyl) dihydrogen phosphate, PROTOPORPHYRIN IX CONTAINING FE
Authors:Dong, S., Du, L., Li, S., Feng, Y.
Deposit date:2017-05-03
Release date:2017-07-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5GWE
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CYTOCHROME P450 CREJ
Descriptor:Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, (4-methylphenyl) dihydrogen phosphate, ...
Authors:Dong, S., liu, X., Wang, X., Feng, Y.
Deposit date:2016-09-11
Release date:2017-07-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective oxidation of aliphatic C-H bonds in alkylphenols by a chemomimetic biocatalytic system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5H4R
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THE COMPLEX OF GLYCOSIDE HYDROLASE 5 LICHENASE FROM CALDICELLULOSIRUPTOR SP. F32 E188Q MUTANT AND CELLOTETRAOSE
Descriptor:Beta-1,3-1,4-glucanase, beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranose, GLYCEROL
Authors:Dong, S., Zhou, H., Liu, X., Wang, X., Feng, Y.
Deposit date:2016-11-02
Release date:2017-09-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.703104 Å)
Cite:Structural insights into the substrate specificity of a glycoside hydrolase family 5 lichenase from Caldicellulosiruptor sp. F32
Biochem. J., 474, 2017
6BD4
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CRYSTAL STRUCTURE OF HUMAN APO-FRIZZLED4 RECEPTOR
Descriptor:Frizzled-4/Rubredoxin chimeric protein, ZINC ION, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ...
Authors:Yang, S., Wu, Y., Pu, M., Chen, Y., Dong, S., Guo, Y., Han, G.Y., Stevens, R.C., Zhao, S., Xu, F.
Deposit date:2017-10-21
Release date:2018-08-22
Last modified:2018-09-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Frizzled 4 receptor in a ligand-free state.
Nature, 560, 2018
5YJ6
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THE EXOGLUCANASE CELS FROM CLOSTRIDIUM THERMOCELLUM
Descriptor:Dockerin type I repeat-containing protein, 3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxaoctatriacontane-1,38-diol
Authors:Liu, Y.J., Liu, S.Y., Dong, S., Li, R.M., Feng, Y.G., Cui, Q.
Deposit date:2017-10-09
Release date:2018-01-31
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Determination of the native features of the exoglucanase Cel48S from Clostridium thermocellum
Biotechnol Biofuels, 11, 2018
5Y6J
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STRUCTURE OF TOMATO SPOTTED WILT VIRUS NUCLEOCAPSID PROTEIN WITH ALTERNATIVE OLIGOMERIZATION STATE
Descriptor:Nucleoprotein
Authors:Guo, Y., Dong, S., Lou, Z.
Deposit date:2017-08-12
Release date:2017-09-27
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.811 Å)
Cite:Distinct Mechanism for the Formation of the Ribonucleoprotein Complex of Tomato Spotted Wilt Virus.
J. Virol., 91, 2017
5ZQI
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ALGINATE LYASE ALGAT5 FROM POLYSACCHARIDE LYASE FAMILY 7
Descriptor:Alginate lyase AlgAT5, SULFATE ION
Authors:Su, H., Dong, S., Feng, Y.G., Ji, S.Q., Lu, M., Li, F.L.
Deposit date:2018-04-19
Release date:2019-04-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Alginate lyase AlgAT5 from Polysaccharide Lyase family 7
To Be Published
4Z9P
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CRYSTAL STRUCTURE OF EBOLA VIRUS NUCLEOPROTEIN CORE DOMAIN AT 1.8A RESOLUTION
Descriptor:Nucleoprotein
Authors:Guo, Y., Dong, S.S., Yang, P., Li, G.B., Liu, B.C., Yang, C., Rao, Z.H.
Deposit date:2015-04-11
Release date:2015-05-20
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Insight into the Ebola virus nucleocapsid assembly mechanism: crystal structure of Ebola virus nucleoprotein core domain at 1.8 A resolution.
Protein Cell, 6, 2015
5F5M
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CRYSTAL STRUCTURE OF MARBURG VIRUS NUCLEOPROTEIN CORE DOMAIN
Descriptor:Nucleoprotein
Authors:Guo, Y., Liu, B.C., Liu, X., Li, G.B., Wang, W.M., Dong, S.S., Wang, W.J.
Deposit date:2015-12-04
Release date:2017-05-31
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Structural Insight into Nucleoprotein Conformation Change Chaperoned by VP35 Peptide in Marburg Virus
J. Virol., 91, 2017
5F5O
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CRYSTAL STRUCTURE OF MARBURG VIRUS NUCLEOPROTEIN CORE DOMAIN BOUND TO VP35 REGULATION PEPTIDE
Descriptor:Nucleoprotein, Peptide from Polymerase cofactor VP35, SULFATE ION
Authors:Guo, Y., Liu, B.C., Liu, X., Li, G.B., Wang, W.M., Dong, S.S., Wang, W.J.
Deposit date:2015-12-04
Release date:2017-05-31
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight into Nucleoprotein Conformation Change Chaperoned by VP35 Peptide in Marburg Virus
J. Virol., 91, 2017
6CI7
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THE STRUCTURE OF YCAO FROM METHANOPYRUS KANDLERI BOUND WITH AMPPCP AND MG2+
Descriptor:YcaO, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION
Authors:Dong, S.-H., Nair, S.K.
Deposit date:2018-02-23
Release date:2018-03-21
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzymatic reconstitution of ribosomal peptide backbone thioamidation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CIB
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THE STRUCTURE OF YCAO FROM METHANOPYRUS KANDLERI BOUND WITH AMPPCP AND MG2+
Descriptor:YcaO, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Dong, S.-H., Nair, S.K.
Deposit date:2018-02-23
Release date:2018-03-21
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Enzymatic reconstitution of ribosomal peptide backbone thioamidation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6MPZ
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CRYSTAL STRUCTURE OF A DOUBLE GLYCINE MOTIF PROTEASE FROM AMS/PCAT TRANSPORTER IN COMPLEX WITH THE LEADER PEPTIDE
Descriptor:Double Glycine Motif Protease domain from AMS/PCAT Transporter, peptide aldehyde inhibitor 1 based on the ProcA2.8 leader peptide, 3,6,9,12,15,18-HEXAOXAICOSANE
Authors:Dong, S.-H., Nair, S.K.
Deposit date:2018-10-09
Release date:2019-02-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into AMS/PCAT transporters from biochemical and structural characterization of a double Glycine motif protease.
Elife, 8, 2019
6IVS
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SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF THE ANTI-SIGMA FACTOR RSGI1 FROM CLOSTRIDIUM THERMOCELLUM
Descriptor:Anti-sigma-I factor RsgI1
Authors:Wei, Z., Feng, Y.
Deposit date:2018-12-04
Release date:2019-05-15
Last modified:2019-07-03
Method:SOLUTION NMR
Cite:Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
6IVU
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SOLUTION STRUCTURE OF THE SIGMA-ANTI-SIGMA FACTOR COMPLEX RSGI1N-SIGI1C FROM CLOSTRIDIUM THERMOCELLUM
Descriptor:Anti-sigma-I factor RsgI1, RNA polymerase sigma factor SigI1
Authors:Wei, Z., Feng, Y.
Deposit date:2018-12-04
Release date:2019-05-15
Last modified:2019-07-03
Method:SOLUTION NMR
Cite:Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
4P2O
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CRYSTAL STRUCTURE OF THE 2B4 TCR IN COMPLEX WITH 2A/I-EK
Descriptor:H-2 class II histocompatibility antigen, E-K alpha chain, MHC class II E-beta-k, ...
Authors:Birnbaum, M.E., Ozkan, E., Garcia, K.C.
Deposit date:2014-03-04
Release date:2014-05-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Deconstructing the Peptide-MHC Specificity of T Cell Recognition.
Cell, 157, 2014
4P2Q
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CRYSTAL STRUCTURE OF THE 5CC7 TCR IN COMPLEX WITH 5C2/I-EK
Descriptor:H-2 class II histocompatibility antigen, E-K alpha chain, MHC class II E-beta-k, ...
Authors:Birnbaum, M.E., Ozkan, E., Garcia, K.C.
Deposit date:2014-03-04
Release date:2014-05-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Deconstructing the Peptide-MHC Specificity of T Cell Recognition.
Cell, 157, 2014
4P2R
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CRYSTAL STRUCTURE OF THE 5CC7 TCR IN COMPLEX WITH 5C1/I-EK
Descriptor:H-2 class II histocompatibility antigen, E-K alpha chain, MHC class II E-beta-k, ...
Authors:Birnbaum, M.E., Ozkan, E., Garcia, K.C.
Deposit date:2014-03-04
Release date:2014-05-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.295 Å)
Cite:Deconstructing the Peptide-MHC Specificity of T Cell Recognition.
Cell, 157, 2014
4X0V
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STRUCTURE OF A GH5 FAMILY LICHENASE FROM CALDICELLULOSIRUPTOR SP. F32
Descriptor:Beta-1,3-1,4-glucanase
Authors:Meng, D., Liu, X., Wang, X., Li, F., Feng, Y.
Deposit date:2014-11-24
Release date:2015-11-25
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Structural Insights into the Substrate Specificity of a Glycoside Hydrolase Family 5 Lichenase from Caldicellulosiruptor sp. F32
Biochem. J., 2017
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