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4DFC
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BU of 4dfc by Molmil
Core UvrA/TRCF complex
Descriptor: Transcription-repair-coupling factor, UvrABC system protein A
Authors:Deaconescu, A.M, Grigorieff, N.
Deposit date:2012-01-23
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Nucleotide excision repair (NER) machinery recruitment by the transcription-repair coupling factor involves unmasking of a conserved intramolecular interface.
Proc.Natl.Acad.Sci.USA, 109, 2012
1JD1
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BU of 1jd1 by Molmil
Crystal Structure of YEO7_yeast
Descriptor: HYPOTHETICAL 13.9 KDA PROTEIN IN FCY2-PET117 INTERGENIC REGION
Authors:Deaconescu, A.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2001-06-12
Release date:2001-07-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray structure of Saccharomyces cerevisiae homologous mitochondrial matrix factor 1 (Hmf1).
Proteins, 48, 2002
2EYQ
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BU of 2eyq by Molmil
Crystal structure of Escherichia coli transcription-repair coupling factor
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, Transcription-repair coupling factor
Authors:Deaconescu, A.M, Darst, S.A.
Deposit date:2005-11-09
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for bacterial transcription-coupled DNA repair.
Cell(Cambridge,Mass.), 124, 2006
6OD1
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BU of 6od1 by Molmil
IraD-bound to RssB D58P variant
Descriptor: Anti-adapter protein IraD, Regulator of RpoS
Authors:Deaconescu, A.M, Dorich, V.
Deposit date:2019-03-25
Release date:2019-04-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for inhibition of a response regulator of sigmaSstability by a ClpXP antiadaptor.
Genes Dev., 33, 2019
7L9C
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BU of 7l9c by Molmil
Receiver Domain of RssB
Descriptor: Regulator of RpoS
Authors:Deaconescu, A.M, Son, J, Schwartz, J.
Deposit date:2021-01-03
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Phospho-dependent signaling during the general stress response by the atypical response regulator and ClpXP adaptor RssB.
Protein Sci., 30, 2021
7LCM
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BU of 7lcm by Molmil
Receiver Domain of RssB bound to beryllofluoride
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Regulator of RpoS
Authors:Deaconescu, A.M, Schwartz, J, Son, J.
Deposit date:2021-01-11
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Phospho-dependent signaling during the general stress response by the atypical response regulator and ClpXP adaptor RssB.
Protein Sci., 30, 2021
8T85
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BU of 8t85 by Molmil
Structure of RssB bound to beryllofluoride
Descriptor: BERYLLIUM TRIFLUORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Brugger, C, Schwartz, J, Deaconescu, A.M.
Deposit date:2023-06-21
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structure of phosphorylated-like RssB, the adaptor delivering sigma s to the ClpXP proteolytic machinery, reveals an interface switch for activation.
J.Biol.Chem., 299, 2023
8TWD
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BU of 8twd by Molmil
Structure of IraM-bound RssB
Descriptor: ACETATE ION, Anti-adapter protein IraM, Regulator of RpoS
Authors:Brugger, C, Deaconescu, A.M.
Deposit date:2023-08-20
Release date:2024-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:IraM remodels the RssB segmented helical linker to stabilize sigma s against degradation by ClpXP.
J.Biol.Chem., 300, 2023
6XEO
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BU of 6xeo by Molmil
Structure of Mfd bound to dsDNA
Descriptor: DNA (5'-D(P*AP*GP*GP*AP*TP*AP*CP*TP*TP*AP*CP*AP*GP*CP*CP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*GP*GP*CP*TP*GP*TP*AP*AP*GP*TP*AP*TP*CP*CP*T)-3'), Transcription-repair-coupling factor
Authors:Brugger, C, Deaconescu, A.
Deposit date:2020-06-12
Release date:2020-08-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Molecular determinants for dsDNA translocation by the transcription-repair coupling and evolvability factor Mfd.
Nat Commun, 11, 2020
3TIN
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BU of 3tin by Molmil
Tubulin tyrosine ligase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ttl protein
Authors:Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G.
Deposit date:2011-08-20
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin.
Nat.Struct.Mol.Biol., 18, 2011
3TII
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BU of 3tii by Molmil
Tubulin tyrosine ligase
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ttl protein
Authors:Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G.
Deposit date:2011-08-20
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin.
Nat.Struct.Mol.Biol., 18, 2011
3TIG
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BU of 3tig by Molmil
Tubulin tyrosine ligase
Descriptor: MAGNESIUM ION, Ttl protein
Authors:Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G.
Deposit date:2011-08-20
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin.
Nat.Struct.Mol.Biol., 18, 2011
4PK3
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BU of 4pk3 by Molmil
tubulin acetyltransferase complex with bisubstrate analog
Descriptor: ACETYL-SER-ASP-(N-ACETYL-LYS)-THR-NH2 PEPTIDE, Alpha-tubulin N-acetyltransferase 1, COENZYME A
Authors:Szyk, A, Roll-Mecak, A.
Deposit date:2014-05-13
Release date:2014-08-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.347 Å)
Cite:Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase.
Cell, 157, 2014
4PK2
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BU of 4pk2 by Molmil
tubulin acetyltransferase complex with bisubstrate analog
Descriptor: ACETYL-SER-(N-PROPANOYL-LYS)-ASP--THR-NH2 PEPTIDE, Alpha-tubulin N-acetyltransferase 1, COENZYME A
Authors:Szyk, A, Roll-Mecak, A.
Deposit date:2014-05-13
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase.
Cell, 157, 2014

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PDB entries from 2024-03-27

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