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2L8H
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BU of 2l8h by Molmil
Chemical probe bound to HIV TAR RNA
Descriptor: 4-methoxynaphthalen-2-amine, ARGININE, HIV TAR RNA
Authors:Davidson, A, Begley, D, Lau, C, Varani, G.
Deposit date:2011-01-12
Release date:2011-03-23
Last modified:2023-02-15
Method:SOLUTION NMR
Cite:A Small-Molecule Probe Induces a Conformation in HIV TAR RNA Capable of Binding Drug-Like Fragments.
J.Mol.Biol., 410, 2011
2KDQ
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BU of 2kdq by Molmil
Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimic of Tat protein
Descriptor: HIV-1 TAR RNA, L-22 CYCLIC PEPTIDE
Authors:Davidson, A, Leeper, T.C, Varani, G.
Deposit date:2009-01-14
Release date:2009-06-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein
Proc.Natl.Acad.Sci.USA, 106, 2009
2KX5
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BU of 2kx5 by Molmil
Recognition of HIV TAR RNA by peptide mimetic of Tat protein
Descriptor: Cyclic peptide mimetic of Tat protein, HIV TAR RNA
Authors:Davidson, A, Patora-Komisarska, K, Robinson, J, Varani, G.
Deposit date:2010-04-26
Release date:2010-07-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein.
Nucleic Acids Res., 39, 2011
1Z1Z
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BU of 1z1z by Molmil
NMR structure of the gpu tail protein from lambda bacteriophage
Descriptor: Minor tail protein U
Authors:Edmonds, L, Maxwell, K, Davidson, A, Donaldson, L.W.
Deposit date:2005-03-07
Release date:2006-04-18
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The NMR structure of the gpU tail-terminator protein from bacteriophage lambda: identification of sites contributing to Mg(II)-mediated oligomerization and biological function.
J.Mol.Biol., 365, 2007
1UW7
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BU of 1uw7 by Molmil
Nsp9 protein from SARS-coronavirus.
Descriptor: NSP9
Authors:Sutton, G, Fry, E, Carter, L, Sainsbury, S, Walter, T, Nettleship, J, Berrow, N, Owens, R, Gilbert, R, Davidson, A, Siddell, S, Poon, L.L.M, Diprose, J, Alderton, D, Walsh, M, Grimes, J.M, Stuart, D.I.
Deposit date:2004-01-30
Release date:2004-02-20
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Nsp9 Replicase Protein of Sars-Coronavirus, Structure and Functional Insights
Structure, 12, 2004
1MBY
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BU of 1mby by Molmil
Murine Sak Polo Domain
Descriptor: serine/threonine kinase
Authors:Leung, G.C, Hudson, J.W, Kozarova, A, Davidson, A, Dennis, J.W, Sicheri, F.
Deposit date:2002-08-04
Release date:2002-10-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Sak polo-box comprises a structural domain sufficient for mitotic subcellular localization.
Nat.Struct.Biol., 9, 2002
3CQT
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BU of 3cqt by Molmil
N53I V55L MUTANT of FYN SH3 DOMAIN
Descriptor: Proto-oncogene tyrosine-protein kinase Fyn
Authors:Neculai, A.M, Zarrine-Afsar, A, Howell, P.L, Davidson, A, Chan, H.S.
Deposit date:2008-04-03
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Theoretical and experimental demonstration of the importance of specific nonnative interactions in protein folding.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RPN
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BU of 2rpn by Molmil
A crucial role for high intrinsic specificity in the function of yeast SH3 domains
Descriptor: Actin-binding protein, Actin-regulating kinase 1
Authors:Stollar, E.J, Garcia, B, Chong, A, Forman-Kay, J, Davidson, A.
Deposit date:2008-06-12
Release date:2009-06-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p
J.Biol.Chem., 284, 2009
2WZQ
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BU of 2wzq by Molmil
Insertion Mutant E173GP174 of the NS3 protease-helicase from dengue virus
Descriptor: CHLORIDE ION, GLYCEROL, NS3 PROTEASE-HELICASE
Authors:Luo, D, Wei, N, Doan, D, Paradkar, P, Chong, Y, Davidson, A, Kotaka, M, Lescar, J, Vasudevan, S.
Deposit date:2009-12-02
Release date:2010-04-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Flexibility between the Protease and Helicase Domains of the Dengue Virus Ns3 Protein Conferred by the Linker Region and its Functional Implications.
J.Biol.Chem., 285, 2010
6D2U
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BU of 6d2u by Molmil
Solution structure of a ultra-high affinity macrocycle bound to HIV-1 TAR RNA
Descriptor: DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO, RNA (29-MER)
Authors:Shortridge, M.D, Varani, G.
Deposit date:2018-04-13
Release date:2018-12-12
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:An ultra-high affinity ligand of HIV-1 TAR reveals the RNA structure recognized by P-TEFb.
Nucleic Acids Res., 47, 2019

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