Author results

2LXH
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NMR STRUCTURE OF THE RING DOMAIN IN UBIQUITIN LIGASE GP78
Descriptor:E3 ubiquitin-protein ligase AMFR, ZINC ION
Authors:Das, R., Linag, Y., Mariano, J., Li, J., Huang, T., King, A., Weissman, A., Ji, X., Byrd, R.
Deposit date:2012-08-27
Release date:2013-08-28
Last modified:2013-10-02
Method:SOLUTION NMR
Cite:Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013
2LXP
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NMR STRUCTURE OF TWO DOMAINS IN UBIQUITIN LIGASE GP78, RING AND G2BR, BOUND TO ITS CONJUGATING ENZYME UBE2G
Descriptor:Ubiquitin-conjugating enzyme E2 G2, E3 ubiquitin-protein ligase AMFR, ZINC ION
Authors:Das, R., Linag, Y., Mariano, J., Li, J., Huang, T., King, A., Weissman, A., Ji, X., Byrd, R.
Deposit date:2012-08-30
Release date:2013-08-28
Last modified:2013-10-02
Method:SOLUTION NMR
Cite:Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013
2JR0
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SOLUTION STRUCTURE OF NUSB FROM AQUIFEX AEOLICUS
Descriptor:N utilization substance protein B homolog
Authors:Das, R., Loss, S., Li, J., Tarasov, S., Wingfield, P., Waugh, D.S., Byrd, R.A., Altieri, A.S.
Deposit date:2007-06-18
Release date:2008-02-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural biophysics of the NusB:NusE antitermination complex.
J.Mol.Biol., 376, 2008
3H8K
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CRYSTAL STRUCTURE OF UBE2G2 COMPLXED WITH THE G2BR DOMAIN OF GP78 AT 1.8-A RESOLUTION
Descriptor:Ubiquitin-conjugating enzyme E2 G2, Autocrine motility factor receptor, isoform 2
Authors:Kalathur, R.C., Das, R., Li, J., Byrd, R.A., Ji, X.
Deposit date:2009-04-29
Release date:2009-07-14
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Allosteric activation of E2-RING finger-mediated ubiquitylation by a structurally defined specific E2-binding region of gp78.
Mol.Cell, 34, 2009
4LAD
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CRYSTAL STRUCTURE OF THE UBE2G2:RING-G2BR COMPLEX
Descriptor:Ubiquitin-conjugating enzyme E2 G2, E3 ubiquitin-protein ligase AMFR, ZINC ION, ...
Authors:Liang, Y.-H., Li, J., Das, R., Byrd, R.A., Ji, X.
Deposit date:2013-06-19
Release date:2013-08-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013
2M20
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EGFR TRANSMEMBRANE - JUXTAMEMBRANE (TM-JM) SEGMENT IN BICELLES: MD GUIDED NMR REFINED STRUCTURE.
Descriptor:Epidermal growth factor receptor
Authors:Endres, N.F., Das, R., Smith, A., Arkhipov, A., Kovacs, E., Huang, Y., Pelton, J.G., Shan, Y., Shaw, D.E., Wemmer, D.E., Groves, J.T., Kuriyan, J.
Deposit date:2012-12-11
Release date:2013-02-20
Method:SOLUTION NMR
Cite:Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor.
Cell(Cambridge,Mass.), 152, 2013
5WWP
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CRYSTAL STRUCTURE OF MIDDLE EAST RESPIRATORY SYNDROME CORONAVIRUS HELICASE (MERS-COV NSP13)
Descriptor:ORF1ab, ZINC ION, SULFATE ION
Authors:Hao, W., Wojdyla, J.A., Zhao, R., Han, R., Das, R., Zlatev, I., Manoharan, M., Wang, M., Cui, S.
Deposit date:2017-01-03
Release date:2017-07-05
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Middle East respiratory syndrome coronavirus helicase
PLoS Pathog., 13, 2017
5CNN
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CRYSTAL STRUCTURE OF THE EGFR KINASE DOMAIN MUTANT I682Q
Descriptor:Epidermal growth factor receptor, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, MAGNESIUM ION
Authors:Kovacs, E., Das, R., Mirza, A., Jura, N., Barros, T., Kuriyan, J.
Deposit date:2015-07-17
Release date:2015-07-29
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor.
Mol.Cell.Biol., 35, 2015
5CNO
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CRYSTAL STRUCTURE OF THE EGFR KINASE DOMAIN MUTANT V924R
Descriptor:Epidermal growth factor receptor, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, MAGNESIUM ION
Authors:Kovacs, E., Das, R., Mirza, A., Jura, N., Barros, T., Kuriyan, J.
Deposit date:2015-07-17
Release date:2015-07-29
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor.
Mol.Cell.Biol., 35, 2015
2LVN
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STRUCTURE OF THE GP78 CUE DOMAIN
Descriptor:E3 ubiquitin-protein ligase AMFR
Authors:Liu, S., Chen, Y., Huang, T., Tarasov, S.G., King, A., Li, J., Weissman, A.M., Byrd, R.A., Das, R.
Deposit date:2012-07-09
Release date:2012-11-21
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2LVO
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STRUCTURE OF THE GP78CUE DOMAIN BOUND TO MONUBIQUITIN
Descriptor:Ubiquitin, E3 ubiquitin-protein ligase AMFR
Authors:Liu, S., Chen, Y., Huang, T., Tarasov, S.G., King, A., Li, J., Weissman, A.M., Byrd, R.A., Das, R.
Deposit date:2012-07-09
Release date:2012-11-21
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2LVP
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GP78CUE DOMAIN BOUND TO THE DISTAL UBIQUITIN OF K48-LINKED DIUBIQUITIN
Descriptor:Ubiquitin, E3 ubiquitin-protein ligase AMFR
Authors:Liu, S., Chen, Y., Huang, T., Tarasov, S.G., King, A., Li, J., Weissman, A.M., Byrd, R.A., Das, R.
Deposit date:2012-07-09
Release date:2012-11-21
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2LVQ
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GP78CUE DOMAIN BOUND TO THE PROXIMAL UBIQUITIN OF K48-LINKED DIUBIQUITIN
Descriptor:Ubiquitin, E3 ubiquitin-protein ligase AMFR
Authors:Liu, S., Chen, Y., Huang, T., Tarasov, S.G., King, A., Li, J., Weissman, A.M., Byrd, R.A., Das, R.
Deposit date:2012-07-09
Release date:2012-11-21
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
2M7T
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SOLUTION NMR STRUCTURE OF ENGINEERED CYSTINE KNOT PROTEIN 2.5D
Descriptor:Cystine Knot Protein 2.5D
Authors:Cochran, F.V., Das, R.
Deposit date:2013-04-30
Release date:2014-05-07
Method:SOLUTION NMR
Cite:Challenging the state of the art in protein structure prediction: Highlights of experimental target structures for the 10th Critical Assessment of Techniques for Protein Structure Prediction Experiment CASP10.
Proteins, 82 Suppl 2, 2014
2MA2
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SOLUTION STRUCTURE OF RASGRP2 EF HANDS BOUND TO CALCIUM
Descriptor:RAS guanyl-releasing protein 2
Authors:Kuriyan, J., Iwig, J., Vercoulen, Y., Das, R., Barros, T., Limnander, A., Che, Y., Pelton, J., Wemmer, D., Roose, J.
Deposit date:2013-06-24
Release date:2013-08-21
Method:SOLUTION NMR
Cite:Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
2NBD
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SOLUTION STRUCTURE OF V26A MUTANT OF UBIQUITIN AT PH 6.0
Descriptor:entity
Authors:Surana, P., Das, R.
Deposit date:2016-02-04
Release date:2016-05-18
Last modified:2016-09-07
Method:SOLUTION NMR
Cite:Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR
Protein Sci., 25, 2016
2NBE
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SOLUTION STRUCTURE OF V26A MUTANT OF UBIQUITIN AT PH 2.0
Descriptor:entity
Authors:Surana, P., Das, R.
Deposit date:2016-02-04
Release date:2016-05-18
Last modified:2016-09-07
Method:SOLUTION NMR
Cite:Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR
Protein Sci., 25, 2016
3GT8
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CRYSTAL STRUCTURE OF THE INACTIVE EGFR KINASE DOMAIN IN COMPLEX WITH AMP-PNP
Descriptor:Epidermal growth factor receptor, Unknown peptide, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Jura, N., Endres, N.F., Engel, K., Deindl, S., Das, R., Lamers, M.H., Wemmer, D.E., Zhang, X., Kuriyan, J.
Deposit date:2009-03-27
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.955 Å)
Cite:Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment.
Cell(Cambridge,Mass.), 137, 2009
4L9M
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AUTOINHIBITED STATE OF THE RAS-SPECIFIC EXCHANGE FACTOR RASGRP1
Descriptor:RAS guanyl-releasing protein 1, CITRIC ACID, GLYCEROL, ...
Authors:Iwig, J.S., Vercoulen, Y., Das, R., Barros, T., Limnander, A., Che, Y., Pelton, J.G., Wemmer, D.E., Roose, J.P., Kuriyan, J.
Deposit date:2013-06-18
Release date:2013-08-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
4L9U
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STRUCTURE OF C-TERMINAL COILED COIL OF RASGRP1
Descriptor:RAS guanyl-releasing protein 1, GLYCEROL, SULFATE ION
Authors:Iwig, J.S., Vercoulen, Y., Das, R., Barros, T., Limnander, A., Che, Y., Pelton, J.G., Wemmer, D.E., Roose, J.P., Kuriyan, J.
Deposit date:2013-06-18
Release date:2013-08-21
Method:X-RAY DIFFRACTION (1.6014 Å)
Cite:Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
5XFU
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DOMAIN SWAPPED DIMER CRYSTAL STRUCTURE OF LOOP1 DELETION MUTANT IN SINGLE-CHAIN MONELLIN
Descriptor:Monellin chain B,Monellin chain A
Authors:Surana, P., Nandwani, N., Udgaonkar, J., Gosavi, S., Das, R.
Deposit date:2017-04-11
Release date:2017-07-26
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:Amino-acid composition after loop deletion drives domain swapping
Protein Sci., 26, 2017
5XQM
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NMR SOLUTION STRUCTURE OF SMO1, SUMO HOMOLOGUE IN CAENORHABDITIS ELEGANS
Descriptor:Small ubiquitin-related modifier
Authors:Gowda, C.M., Surana, P., Das, R.
Deposit date:2017-06-07
Release date:2017-11-08
Method:SOLUTION NMR
Cite:Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans
PLoS ONE, 12, 2017
5YCT
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ENGINEERED HAIRPIN LOOP3 MUTANT MONOMER IN SINGLE-CHAIN MONELLIN
Descriptor:Single chain Monellin
Authors:Surana, P., Nandwani, N., Udgaonkar, J.B., Gosavi, S., Das, R.
Deposit date:2017-09-08
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5YCU
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DOMAIN SWAPPED DIMER OF ENGINEERED HAIRPIN LOOP1 MUTANT IN SINGLE-CHAIN MONELLIN
Descriptor:Single chain monellin
Authors:Surana, P., Nandwani, N., Udgaonkar, J.B., Gosavi, S., Das, R.
Deposit date:2017-09-08
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
5YCW
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DOUBLE DOMAIN SWAPPED DIMER OF ENGINEERED HAIRPIN LOOP1 AND LOOP3 MUTANT IN SINGLE-CHAIN MONELLIN
Descriptor:single chain monellin
Authors:Surana, P., Nandwani, N., Udgaonkar, J.B., Gosavi, S., Das, R.
Deposit date:2017-09-08
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:A five-residue motif for the design of domain swapping in proteins.
Nat Commun, 10, 2019
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