Author results

2GES
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PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN COMPLEX WITH A COENZYME A DERIVATIVE, FORM-I (RT)
Descriptor:Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S., Kumar, P., Bhor, V., Surolia, A., Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GET
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PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN COMPLEX WITH A COENZYME A DERIVATIVE, FORM-I (LT)
Descriptor:Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE, GLYCEROL
Authors:Das, S., Kumar, P., Bhor, V., Surolia, A., Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEU
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PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN COMPLEX WITH A COENZYME A DERIVATIVE, FORM-II (RT)
Descriptor:Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S., Kumar, P., Bhor, V., Surolia, A., Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEV
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PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN COMPLEX WITH A COENZYME A DERIVATIVE, FORM-II (LT)
Descriptor:Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Das, S., Kumar, P., Bhor, V., Surolia, A., Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
5GO5
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STRUCTURE OF SORTASE E FROM STREPTOMYCES AVERMITILIS
Descriptor:sortase, GLYCINE, SULFATE ION
Authors:Das, S., Pawale, V.S., Dadireddy, V., Roy, R.P., Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-03-15
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference.
J. Biol. Chem., 292, 2017
5GO6
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STRUCTURE OF SORTASE E T196V MUTANT FROM STREPTOMYCES AVERMITILIS
Descriptor:Putative secreted protein, SULFATE ION
Authors:Das, S., Pawale, V.S., Dadireddy, V., Roy, R.P., Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-07-26
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of sortase E T196V mutant from Streptomyces avermitilis
To Be Published
4I2N
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CRYSTAL STRUCTURE OF 31KD HEAT SHOCK PROTEIN, VCHSP31 FROM VIBRIO CHOLERAE
Descriptor:Intracellular protease/amidase, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION
Authors:Das, S., Sen, U.
Deposit date:2012-11-22
Release date:2013-11-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
5FDY
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CRYSTAL STRUCTURE OF THE VOLTAGE-GATED SODIUM CHANNEL BETA 2 SUBUNIT EXTRACELLULAR DOMAIN, C72A/C75A MUTANT
Descriptor:Sodium channel subunit beta-2, GLYCEROL
Authors:Das, S., Van Petegem, F.
Deposit date:2015-12-16
Release date:2016-03-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5FEB
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CRYSTAL STRUCTURE OF THE VOLTAGE-GATED SODIUM CHANNEL BETA 2 SUBUNIT EXTRACELLULAR DOMAIN
Descriptor:Sodium channel subunit beta-2, GLYCEROL
Authors:Das, S., Van Petegem, F.
Deposit date:2015-12-16
Release date:2016-03-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
6BBP
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MODEL FOR COMPACT VOLUME OF TRUNCATED MONOMERIC CYTOHESIN-3 (GRP1; AMINO ACIDS 63-399) E161A 6GS ARF6 Q67L FUSION PROTEIN
Descriptor:Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Das, S., Malaby, A.W., Lambright, D.G.
Deposit date:2017-10-19
Release date:2018-01-10
Last modified:2018-01-17
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
6BBQ
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MODEL FOR EXTENDED VOLUME OF TRUNCATED MONOMERIC CYTOHESIN-3 (GRP1; AMINO ACIDS 63-399) E161A ARF6 Q67L FUSION PROTEIN
Descriptor:Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Das, S., Malaby, A.W., Lambright, D.G.
Deposit date:2017-10-19
Release date:2018-01-10
Last modified:2018-01-17
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
3MXC
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STRUCTURES OF GRB2-SH2 DOMAIN AND AICD PEPTIDE COMPLEXES REVEAL A CONFORMATIONAL SWITCH AND THEIR FUNCTIONAL IMPLICATIONS.
Descriptor:Growth factor receptor-bound protein 2, AICD peptide
Authors:Sen, U., Das, S.
Deposit date:2010-05-07
Release date:2011-05-11
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional Implications of the Conformational Switch in AICD Peptide upon Binding to Grb2-SH2 Domain.
J.Mol.Biol., 414, 2011
3MXY
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STRUCTURES OF GRB2-SH2 DOMAIN AND AICD PEPTIDE COMPLEXES REVEAL A CONFORMATIONAL SWITCH AND THEIR FUNCTIONAL IMPLICATIONS.
Descriptor:Growth factor receptor-bound protein 2, AICD peptide E683V variant
Authors:Sen, U., Das, S.
Deposit date:2010-05-08
Release date:2011-05-11
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional Implications of the Conformational Switch in AICD Peptide upon Binding to Grb2-SH2 Domain.
J.Mol.Biol., 414, 2011
4I46
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CRYSTAL STRUCTURE OF 31KD HEAT SHOCK PROTEIN, VCHSP31 FROM VIBRIO CHOLERAE
Descriptor:Intracellular protease/amidase, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Sen, U., Das, S.
Deposit date:2012-11-27
Release date:2013-11-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
4MZ2
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CRYSTAL STRUCTURE OF THE VOLTAGE-GATED SODIUM CHANNEL BETA 4 SUBUNIT EXTRACELLULAR DOMAIN
Descriptor:Sodium channel subunit beta-4
Authors:Das, S., Van Petegem, F.
Deposit date:2013-09-28
Release date:2013-12-04
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.722 Å)
Cite:Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013
4MZ3
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CRYSTAL STRUCTURE OF THE VOLTAGE-GATED SODIUM CHANNEL BETA 4 SUBUNIT EXTRACELLULAR DOMAIN, C131W MUTANT
Descriptor:Sodium channel subunit beta-4
Authors:Das, S., Van Petegem, F.
Deposit date:2013-09-28
Release date:2013-12-04
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.741 Å)
Cite:Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013
5HGC
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A SERPIN STRUCTURE
Descriptor:Serpin, (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, SULFATE ION, ...
Authors:Das, S., Vashchenko, G.V., Van Petegem, F.
Deposit date:2016-01-08
Release date:2016-04-06
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A Serpin structure
J.Biol.Chem., 2016
4O8L
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STRUCTURE OF SORTASE A FROM STREPTOCOCCUS PNEUMONIAE
Descriptor:Sortase
Authors:Misra, A., Biswas, T., Das, S., Marathe, U., Roy, R.P., Ramakumar, S.
Deposit date:2013-12-28
Release date:2015-01-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of sortase A from Streptococcus pneumoniae
To be Published
1VEI
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MYCOBACTERIUM SMEGMATIS DPS
Descriptor:starvation-induced DNA protecting protein, FE (III) ION, SULFATE ION
Authors:Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., Vijayan, M.
Deposit date:2004-03-31
Release date:2004-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:X-ray Analysis of Mycobacterium smegmatis Dps and a Comparative Study Involving Other Dps and Dps-like Molecules
J.Mol.Biol., 339, 2004
1VEL
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MYCOBACTERIUM SMEGMATIS DPS TETRAGONAL FORM
Descriptor:starvation-induced DNA protecting protein, CADMIUM ION, SODIUM ION, ...
Authors:Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., Vijayan, M.
Deposit date:2004-04-01
Release date:2004-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules
J.Mol.Biol., 339, 2004
1VEQ
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MYCOBACTERIUM SMEGMATIS DPS HEXAGONAL FORM
Descriptor:starvation-induced DNA protecting protein, FE (III) ION
Authors:Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., Vijayan, M.
Deposit date:2004-04-03
Release date:2004-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.98 Å)
Cite:X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules
J.Mol.Biol., 339, 2004
1Z57
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CRYSTAL STRUCTURE OF HUMAN CLK1 IN COMPLEX WITH 10Z-HYMENIALDISINE
Descriptor:Dual specificity protein kinase CLK1, DEBROMOHYMENIALDISINE
Authors:Debreczeni, J., Das, S., Knapp, S., Bullock, A., Guo, K., Amos, A., Fedorov, O., Edwards, A., Sundstrom, M., von Delft, F., Niesen, F.H., Ball, L., Sobott, F., Arrowsmith, C., Structural Genomics Consortium (SGC)
Deposit date:2005-03-17
Release date:2005-04-12
Last modified:2012-08-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Kinase domain insertions define distinct roles of CLK kinases in SR protein phosphorylation.
Structure, 17, 2009
2C47
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STRUCTURE OF CASEIN KINASE 1 GAMMA 2
Descriptor:CASEIN KINASE 1 GAMMA 2 ISOFORM, (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, MAGNESIUM ION
Authors:Bunkoczi, G., Rellos, P., Das, S., Ugochukwu, E., Fedorov, O., Sobott, F., Eswaran, J., Amos, A., Ball, L., von Delft, F., Bullock, A., Debreczeni, J., Turnbull, A., Sundstrom, M., Weigelt, J., Arrowsmith, C., Edwards, A., Knapp, S.
Deposit date:2005-10-16
Release date:2005-11-07
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structure of Casein Kinase 1 Gamma 2
To be Published
2CHL
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STRUCTURE OF CASEIN KINASE 1 GAMMA 3
Descriptor:CASEIN KINASE I ISOFORM GAMMA-3, 5-AMINO-3-{[4-(AMINOSULFONYL)PHENYL]AMINO}-N-(2,6-DIFLUOROPHENYL)-1H-1,2,4-TRIAZOLE-1-CARBOTHIOAMIDE, SULFATE ION
Authors:Bunkoczi, G., Salah, E., Rellos, P., Das, S., Fedorov, O., Savitsky, P., Gileadi, O., Sundstrom, M., Edwards, A., Arrowsmith, C., Ugochukwu, E., Weigelt, J., von Delft, F., Knapp, S.
Deposit date:2006-03-15
Release date:2006-03-22
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of Casein Kinase 1 Gamma 3
To be Published
2CMW
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STRUCTURE OF HUMAN CASEIN KINASE 1 GAMMA-1 IN COMPLEX WITH 2-(2- HYDROXYETHYLAMINO)-6-(3-CHLOROANILINO)-9-ISOPROPYLPURINE
Descriptor:CASEIN KINASE I ISOFORM GAMMA-1, 2-(2-HYDROXYETHYLAMINO)-6-(3-CHLOROANILINO)-9-ISOPROPYLPURINE, PHOSPHATE ION, ...
Authors:Bunkoczi, G., Rellos, P., Das, S., Savitsky, P., Niesen, F., Sobott, F., Fedorov, O., Pike, A.C.W., von Delft, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Weigelt, J., Knapp, S.
Deposit date:2006-05-15
Release date:2006-06-15
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of Human Casein Kinase 1 Gamma-1 in Complex with 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-Isopropylpurine (Casp Target)
To be Published