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Au1 Domain of VEGF Readthrough Element
Descriptor:	RNA (60-MER)
Authors:	D'Souza, V.M, Wagner, N.O, Edwards, J.M.
Deposit date:	2020-11-24
Release date:	2022-06-01
Method:	SOLUTION NMR
Cite:	Stop codon readthrough in VEGF-A is regulated by complex signals To Be Published

7KUC

Ax1 Domain of VEGF Readthrough Element
Descriptor:	VEGF Ax1
Authors:	D'Souza, V.M, Wagner, N.O, Edwards, J.M.
Deposit date:	2020-11-24
Release date:	2022-06-01
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	Stop codon readthrough in VEGF-A is regulated by complex signals To Be Published

7KUD

Ax2 Domain of VEGF Readthrough Element
Descriptor:	VEGF Ax2
Authors:	D'Souza, V.M, Wagner, N.O, Edwards, J.M.
Deposit date:	2020-11-24
Release date:	2022-06-01
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	Stop codon readthrough in VEGF-A is regulated by complex signals To Be Published

2MQV

Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome bound to the retroviral nucleocapsid protein
Descriptor:	Nucleocapsid protein p10, RNA (68-MER), ZINC ION
Authors:	D'Souza, V.M, Yildiz, Z.
Deposit date:	2014-06-27
Release date:	2014-09-17
Last modified:	2014-12-24
Method:	SOLUTION NMR
Cite:	A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing. Nature, 515, 2014

1WKM

THE PRODUCT BOUND FORM OF THE MN(II)LOADED METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
Descriptor:	MANGANESE (II) ION, METHIONINE, Methionine aminopeptidase
Authors:	Copik, A.J, Nocek, B.P, Jang, S.B, Swierczek, S.I, Ruebush, S, Meng, L, D'souza, V.M, Peters, J.W, Bennett, B, Holz, R.C.
Deposit date:	2004-06-01
Release date:	2005-02-22
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	EPR and X-ray crystallographic characterization of the product-bound form of the MnII-loaded methionyl aminopeptidase from Pyrococcus furiosus Biochemistry, 44, 2005

7T1O

Solution structure of 7SK stem-loop 1 with HIV-1 Tat Subtype G Arginine Rich Motif
Descriptor:	7SK stem-loop 1 RNA (56-MER), Tat Subtype G Arginine Rich Motif
Authors:	Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:	2021-12-02
Release date:	2022-09-14
Method:	SOLUTION NMR, SOLUTION SCATTERING
Cite:	A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA. Commun Biol, 5, 2022

7T1P

Solution structure of 7SK stem-loop 1 with HIV-1 Tat Finland Arginine Rich Motif
Descriptor:	RNA (56-MER), Tat Finland Arginine Rich Motif
Authors:	Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:	2021-12-02
Release date:	2022-09-14
Method:	SOLUTION NMR, SOLUTION SCATTERING
Cite:	A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA. Commun Biol, 5, 2022

7T1N

Solution structure of 7SK stem-loop 1 with HEXIM Arginine Rich Motif
Descriptor:	HEXIM Arginine Rich Motif, RNA (56-MER)
Authors:	Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:	2021-12-02
Release date:	2022-09-14
Method:	SOLUTION NMR, SOLUTION SCATTERING
Cite:	A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA. Commun Biol, 5, 2022

6MCF

Solution structure of 7SK stem-loop 1 with HIV-1 Tat RNA Binding Domain
Descriptor:	7SK Stem-loop 1 RNA, Protein Tat
Authors:	Pham, V.V, D'Souza, V.M.
Deposit date:	2018-08-31
Release date:	2018-10-31
Last modified:	2019-11-20
Method:	SOLUTION NMR
Cite:	HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry. Nat Commun, 9, 2018

6MCE

Solution structure of HIV-1 TAR with Tat RNA Binding Domain
Descriptor:	Protein Tat, TAR RNA
Authors:	Pham, V.V, D'Souza, V.M.
Deposit date:	2018-08-31
Release date:	2018-10-31
Last modified:	2019-11-20
Method:	SOLUTION NMR
Cite:	HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry. Nat Commun, 9, 2018

6MCI

Solution structure of 7SK stem-loop 1
Descriptor:	7SK RNA
Authors:	Pham, V.V, D'Souza, V.M.
Deposit date:	2018-08-31
Release date:	2018-10-31
Last modified:	2019-11-20
Method:	SOLUTION NMR
Cite:	HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry. Nat Commun, 9, 2018

2KX8

NMR structure of stem-loop 4 from the human 7SK snRNA in complex with arginine
Descriptor:	7SK, ARGININE
Authors:	Durney, M.A, D'Souza, V.M.
Deposit date:	2010-04-27
Release date:	2010-09-08
Last modified:	2011-07-13
Method:	SOLUTION NMR
Cite:	Preformed protein-binding motifs in 7SK snRNA: structural and thermodynamic comparisons with retroviral TAR. J.Mol.Biol., 404, 2010

2MS0

Solution NMR structure pf tRNApro:MLV-Nucleocapsid (1:2) Complex
Descriptor:	Nucleocapsid protein p10, ZINC ION, tRNApro
Authors:	D'Souza, V, Yildiz, Z.
Deposit date:	2014-07-19
Release date:	2014-09-17
Last modified:	2014-12-24
Method:	SOLUTION NMR
Cite:	A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing. Nature, 515, 2014

2NBZ

Solution structure of the K domain of EMCV IRES
Descriptor:	IRES RNA 40-MER
Authors:	Imai, S, D'Souza, V, Wagner, G.
Deposit date:	2016-03-16
Release date:	2016-08-10
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation. Nat. Struct. Mol. Biol., 23, 2016

2NBY

Solution structure of the J domain of EMCV IRES
Descriptor:	IRES RNA (39-MER)
Authors:	Imai, S, D'Souza, V, Wagner, G.
Deposit date:	2016-03-16
Release date:	2016-08-10
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation. Nat. Struct. Mol. Biol., 23, 2016

2NC1

Solution structure of the delta-J-delta-K domain of EMCV IRES
Descriptor:	IRES RNA (67-MER)
Authors:	Imai, S, D'Souza, V, Wagner, G.
Deposit date:	2016-03-16
Release date:	2016-08-10
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation. Nat. Struct. Mol. Biol., 23, 2016

2NC0

Solution structure of the St domain of EMCV IRES
Descriptor:	IRES RNA (28-MER)
Authors:	Imai, S, D'Souza, V, Wagner, G.
Deposit date:	2016-03-16
Release date:	2016-08-10
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation. Nat. Struct. Mol. Biol., 23, 2016

2NBX

Solution structure of the J-K region of EMCV IRES
Descriptor:	IRES RNA (108-MER)
Authors:	Imai, S, D'Souza, V, Wagner, G.
Deposit date:	2016-03-16
Release date:	2016-08-10
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation. Nat. Struct. Mol. Biol., 23, 2016

2MQT

Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome
Descriptor:	RNA (68-MER)
Authors:	D'Souza, V, Yildiz, Z.
Deposit date:	2014-06-26
Release date:	2014-09-10
Last modified:	2014-12-24
Method:	SOLUTION NMR
Cite:	A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing. Nature, 515, 2014

2MS1

Solution NMR structure of tRNApro:MLV Nucleocapsid Protein (1:1) Complex
Descriptor:	Nucleocapsid protein p10, ZINC ION, tRNApro
Authors:	D'Souza, V, Yildiz, Z.
Deposit date:	2014-07-19
Release date:	2014-09-10
Last modified:	2014-12-24
Method:	SOLUTION NMR
Cite:	A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing. Nature, 515, 2014

2LC8

Solution structure of the MLV readthrough pseudoknot
Descriptor:	RNA (56-MER)
Authors:	Houck-Loomis, B, Durney, M.A.
Deposit date:	2011-04-26
Release date:	2011-11-23
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	An equilibrium-dependent retroviral mRNA switch regulates translational recoding Nature, 480, 2011

Total results:	21
Displayed results:	21
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