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1IF0
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BU of 1if0 by Molmil
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
Descriptor: PROTEIN (MAJOR CAPSID PROTEIN GP5)
Authors:Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
Deposit date:2001-04-11
Release date:2001-05-02
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
5KEP
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BU of 5kep by Molmil
High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes
Descriptor: Major capsid protein L1
Authors:Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
Deposit date:2016-06-10
Release date:2017-01-25
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
6BSP
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BU of 6bsp by Molmil
High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitope on Human Papillomavirus 16
Descriptor: Major capsid protein L1, U4 Heavy chain, U4 Light chain
Authors:Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christenson, N.D, Hafenstein, S.
Deposit date:2017-12-04
Release date:2018-02-14
Last modified:2018-10-24
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.
Viruses, 9, 2017
4V4U
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BU of 4v4u by Molmil
The quasi-atomic model of Human Adenovirus type 5 capsid
Descriptor: HEXON PROTEIN, N-TERMINAL PEPTIDE OF FIBER PROTEIN, PENTON PROTEIN
Authors:Fabry, C.M.S, Rosa-Calatrava, M, Conway, J.F, Zubieta, C, Cusack, S, Ruigrok, R.W.H, Schoehn, G.
Deposit date:2005-03-03
Release date:2014-07-09
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (10 Å)
Cite:A Quasi-Atomic Model of Human Adenovirus Type 5 Capsid.
Embo J., 24, 2005
6OJ0
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BU of 6oj0 by Molmil
Cryo-EM reconstruction of Sulfolobus polyhedral virus 1 (SPV1)
Descriptor: Structural protein VP4, Uncharacterized protein
Authors:Wang, F, Liu, Y, Conway, J.F, Krupovic, M, Prangishvili, D, Egelman, E.H.
Deposit date:2019-04-10
Release date:2019-10-02
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A packing for A-form DNA in an icosahedral virus.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OKB
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BU of 6okb by Molmil
Prohead 2 of the phage T5
Descriptor: Major capsid protein
Authors:Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
Deposit date:2019-04-12
Release date:2019-10-02
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OMC
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BU of 6omc by Molmil
capsid of T5 virion
Descriptor: Major capsid protein
Authors:Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
Deposit date:2019-04-18
Release date:2019-10-02
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019
3DDX
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BU of 3ddx by Molmil
HK97 bacteriophage capsid Expansion Intermediate-II model
Descriptor: Major capsid protein
Authors:Lee, K.K, Gan, L, Conway, J.F, Hendrix, R.W, Steven, A.C, Johnson, J.E.
Deposit date:2008-06-06
Release date:2008-11-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY
Cite:Virus capsid expansion driven by the capture of mobile surface loops.
Structure, 16, 2008
6OMA
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BU of 6oma by Molmil
non-decorated head of the phage T5
Descriptor: Major capsid protein
Authors:Huet, A, Duda, R.L, Boulanger, P, Conway, J.F.
Deposit date:2019-04-18
Release date:2019-10-02
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 116, 2019
6P3E
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BU of 6p3e by Molmil
Mobile loops and electrostatic interactions maintain the flexible lambda tail tube
Descriptor: Tail tube protein
Authors:Campbell, P, Duda, R.L, Nassur, J, Hendrix, R.W, Conway, J.F, Huet, A.
Deposit date:2019-05-23
Release date:2019-11-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda.
J.Mol.Biol., 432, 2020
8FQK
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BU of 8fqk by Molmil
Asymmetric unit of HK97 phage prohead I
Descriptor: Scaffolding domain delta
Authors:Huet, A, Oh, B, Maurer, J, Duda, R.L, Conway, J.F.
Deposit date:2023-01-06
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A symmetry mismatch unraveled: How phage HK97 scaffold flexibly accommodates a 12-fold pore at a 5-fold viral capsid vertex.
Sci Adv, 9, 2023
8FQL
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BU of 8fql by Molmil
Portal vertex of HK97 phage
Descriptor: Portal protein
Authors:Huet, A, Oh, B, Maurer, J, Duda, R.L, Conway, J.F.
Deposit date:2023-01-06
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A symmetry mismatch unraveled: How phage HK97 scaffold flexibly accommodates a 12-fold pore at a 5-fold viral capsid vertex.
Sci Adv, 9, 2023
5KEQ
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BU of 5keq by Molmil
High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes
Descriptor: Major capsid protein L1
Authors:Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
Deposit date:2016-06-10
Release date:2017-01-25
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
6BT3
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BU of 6bt3 by Molmil
High-Resolution Structure Analysis of Antibody V5 Conformational Epitope on Human Papillomavirus 16
Descriptor: Major capsid protein L1, V5 Fab Heavy-chain, V5 Fab Light-chain
Authors:Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S.
Deposit date:2017-12-05
Release date:2018-01-17
Last modified:2018-01-24
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.
Viruses, 9, 2017
2C9F
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BU of 2c9f by Molmil
THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON DODECAHEDRON
Descriptor: FIBER, PENTON PROTEIN
Authors:Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F.
Deposit date:2005-12-12
Release date:2006-03-02
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (16.5 Å)
Cite:Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
J.Mol.Biol., 356, 2006
2C9G
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BU of 2c9g by Molmil
THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON
Descriptor: PENTON PROTEIN
Authors:Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F.
Deposit date:2005-12-12
Release date:2006-01-04
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
J.Mol.Biol., 356, 2006
8EDU
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BU of 8edu by Molmil
Mycobacteriophage Muddy capsid
Descriptor: Capsid
Authors:Freeman, K.G, White, S.J, Huet, A, Conway, J.F.
Deposit date:2022-09-06
Release date:2023-02-01
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A structural dendrogram of the actinobacteriophage major capsid proteins provides important structural insights into the evolution of capsid stability.
Structure, 31, 2023
2FTE
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BU of 2fte by Molmil
Bacteriophage HK97 Expansion Intermediate IV
Descriptor: major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-24
Release date:2006-02-07
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FSY
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BU of 2fsy by Molmil
Bacteriophage HK97 Pepsin-treated Expansion Intermediate IV
Descriptor: major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-23
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FRP
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BU of 2frp by Molmil
Bacteriophage HK97 Expansion Intermediate IV
Descriptor: Major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-19
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FT1
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BU of 2ft1 by Molmil
Bacteriophage HK97 Head II
Descriptor: major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-23
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FS3
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BU of 2fs3 by Molmil
Bacteriophage HK97 K169Y Head I
Descriptor: Major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-20
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
3J6M
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BU of 3j6m by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackievirus and adenovirus receptor
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J6O
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BU of 3j6o by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackie and adenovirus receptor
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J3Z
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BU of 3j3z by Molmil
Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment
Descriptor: MA28-7 neutralizing antibody heavy chain, MA28-7 neutralizing antibody light chain
Authors:Lee, H, Cifuente, J.O, Ashley, R.E, Conway, J.F, Makhov, A.M, Tano, Y, Shimizu, H, Nishimura, Y, Hafenstein, S.
Deposit date:2013-05-21
Release date:2013-08-28
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (23.4 Å)
Cite:A strain-specific epitope of enterovirus 71 identified by cryo-electron microscopy of the complex with fab from neutralizing antibody.
J.Virol., 87, 2013

 

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