Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1FQT
DownloadVisualize
BU of 1fqt by Molmil
CRYSTAL STRUCTURE OF THE RIESKE-TYPE FERREDOXIN ASSOCIATED WITH BIPHENYL DIOXYGENASE
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, RIESKE-TYPE FERREDOXIN OF BIPHENYL DIOXYGENASE
Authors:Colbert, C.L, Couture, M.M.-J, Eltis, L.D, Bolin, J.T.
Deposit date:2000-09-06
Release date:2001-01-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A cluster exposed: structure of the Rieske ferredoxin from biphenyl dioxygenase and the redox properties of Rieske Fe-S proteins.
Structure Fold.Des., 8, 2000
3ONT
DownloadVisualize
BU of 3ont by Molmil
The Crystal Structure of Spot14, a modulator of lipogenesis
Descriptor: Spot 14 protein
Authors:Colbert, C.L, Kwon, H.J, Deisenhofer, J.
Deposit date:2010-08-30
Release date:2011-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of Spot 14, a modulator of fatty acid synthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
2F9S
DownloadVisualize
BU of 2f9s by Molmil
2nd Crystal Structure Of A Soluble Domain Of ResA In The Oxidised Form
Descriptor: Thiol-disulfide oxidoreductase resA
Authors:Colbert, C.L, Wu, Q, Erbel, P.J.A, Gardner, K.H, Deisenhofer, J.
Deposit date:2005-12-06
Release date:2006-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Mechanism of substrate specificity in Bacillus subtilis ResA, a thioredoxin-like protein involved in cytochrome c maturation
Proc.Natl.Acad.Sci.USA, 103, 2006
3GZX
DownloadVisualize
BU of 3gzx by Molmil
Crystal Structure of the Biphenyl Dioxygenase in complex with Biphenyl from Comamonas testosteroni Sp. Strain B-356
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BIPHENYL, Biphenyl dioxygenase subunit alpha, ...
Authors:Kumar, P, Colbert, C.L, Bolin, J.T.
Deposit date:2009-04-08
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural Characterization of Pandoraea pnomenusa B-356 Biphenyl Dioxygenase Reveals Features of Potent Polychlorinated Biphenyl-Degrading Enzymes
Plos One, 8, 2013
3GZY
DownloadVisualize
BU of 3gzy by Molmil
Crystal Structure of the Biphenyl Dioxygenase from Comamonas testosteroni Sp. Strain B-356
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Biphenyl dioxygenase subunit alpha, Biphenyl dioxygenase subunit beta, ...
Authors:Kumar, P, Colbert, C.L, Bolin, J.T.
Deposit date:2009-04-08
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural Characterization of Pandoraea pnomenusa B-356 Biphenyl Dioxygenase Reveals Features of Potent Polychlorinated Biphenyl-Degrading Enzymes
Plos One, 8, 2013
6OVM
DownloadVisualize
BU of 6ovm by Molmil
Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain (SeMet)
Descriptor: Ferric-pseudobactin BN7/BN8 receptor, L(+)-TARTARIC ACID, Siderophore-interacting protein
Authors:Jensen, J.L, Colbert, C.L.
Deposit date:2019-05-08
Release date:2020-03-04
Last modified:2020-05-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria.
J.Biol.Chem., 295, 2020
4XYN
DownloadVisualize
BU of 4xyn by Molmil
X-ray structure of Ca(2+)-S100B with human RAGE-derived W61 peptide
Descriptor: CALCIUM ION, Protein S100-B, Receptor for advanced glycation endproducts-derived peptide (W61)
Authors:Jensen, J.L, Indurthi, V.S.K, Neau, D, Vetter, S.W, Colbert, C.L.
Deposit date:2015-02-02
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural insights into the binding of the human receptor for advanced glycation end products (RAGE) by S100B, as revealed by an S100B-RAGE-derived peptide complex.
Acta Crystallogr.,Sect.D, 71, 2015
5VHG
DownloadVisualize
BU of 5vhg by Molmil
Crystal structure of pentad mutant GAPR-1
Descriptor: Golgi-associated plant pathogenesis-related protein 1, SULFATE ION
Authors:Li, Y, Zhao, Y, Su, M, Chakravarthy, S, Colbert, C.L, Levine, B, Sinha, S.C.
Deposit date:2017-04-13
Release date:2017-09-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural insights into the interaction of the conserved mammalian proteins GAPR-1 and Beclin 1, a key autophagy protein.
Acta Crystallogr D Struct Biol, 73, 2017
5CAM
DownloadVisualize
BU of 5cam by Molmil
Crystal Structure of the Cytoplasmic Domain of the Pseudomonas putida Anti-sigma Factor PupR (SeMet)
Descriptor: PupR protein
Authors:Jensen, J.L, Colbert, C.L.
Deposit date:2015-06-29
Release date:2015-09-09
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.171 Å)
Cite:Mechanistic Implications of the Unique Structural Features and Dimerization of the Cytoplasmic Domain of the Pseudomonas Sigma Regulator, PupR.
Biochemistry, 54, 2015
5COS
DownloadVisualize
BU of 5cos by Molmil
Crystal Structure of the Cytoplasmic Domain of the Pseudomonas putida Anti-sigma Factor PupR
Descriptor: Siderophore-interacting protein
Authors:Jensen, J.L, Colbert, C.L.
Deposit date:2015-07-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.019 Å)
Cite:Mechanistic Implications of the Unique Structural Features and Dimerization of the Cytoplasmic Domain of the Pseudomonas Sigma Regulator, PupR.
Biochemistry, 54, 2015
5D7F
DownloadVisualize
BU of 5d7f by Molmil
X-ray structure of Ca(2+)-S100B with human RAGE-derived W72 peptide
Descriptor: Advanced glycosylation end product-specific receptor, CALCIUM ION, GLYCEROL, ...
Authors:Jensen, J.L, Colbert, C.L.
Deposit date:2015-08-13
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray structure of Ca(2+)-S100B with human RAGE-derived W72 peptide
To Be Published
2EI3
DownloadVisualize
BU of 2ei3 by Molmil
Anaerobic Crystal Structure Analysis of the 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexes with 2,3-dihydroxybiphenyl
Descriptor: 1,2-dihydroxynaphthalene dioxygenase, BIPHENYL-2,3-DIOL, FE (II) ION, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
2EI0
DownloadVisualize
BU of 2ei0 by Molmil
Anaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 3,4-dihydroxybiphenyl
Descriptor: 1,1'-BIPHENYL-3,4-DIOL, 1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
2EI2
DownloadVisualize
BU of 2ei2 by Molmil
Crystal Structure Analysis of the 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. stain C18
Descriptor: 1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, GLYCEROL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
2EI1
DownloadVisualize
BU of 2ei1 by Molmil
Anaerobic Crystal Structure Analysis of the 1,2-dihydroxynaphthalene dioxygeanse of Pseudomonas sp. strain C18 complexes to 1,2-dihydroxynaphthalene
Descriptor: 1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, GLYCEROL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites.
To be Published
2EHZ
DownloadVisualize
BU of 2ehz by Molmil
Anaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 4-methylcatechol
Descriptor: 1,2-ETHANEDIOL, 1,2-dihydroxynaphthalene dioxygenase, 4-METHYLCATECHOL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
6OVK
DownloadVisualize
BU of 6ovk by Molmil
Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain
Descriptor: Ferric-pseudobactin BN7/BN8 receptor, L(+)-TARTARIC ACID, Siderophore-interacting protein
Authors:Jensen, J.L, Colbert, C.L.
Deposit date:2019-05-08
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria.
J.Biol.Chem., 295, 2020
4Q5U
DownloadVisualize
BU of 4q5u by Molmil
Structure of calmodulin bound to its recognition site from calcineurin
Descriptor: CALCIUM ION, Calmodulin, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
Authors:Guo, H, Dunlap, T.B, Creamer, T.P, Vander Kooi, C.W.
Deposit date:2014-04-17
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Stoichiometry of the calcineurin regulatory domain-calmodulin complex.
Biochemistry, 53, 2014
8SM5
DownloadVisualize
BU of 8sm5 by Molmil
Crystal Structure of BHRF1 from Epstein Barr Virus in complex with BID BH3 peptide
Descriptor: Apoptosis regulator BHRF1, BID BH3
Authors:Wyatt, S, Sinha, S.
Deposit date:2023-04-25
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.61002612 Å)
Cite:Epstein-Barr Virus Encoded BCL2, BHRF1, Downregulates Autophagy by Noncanonical Binding of BECN1.
Biochemistry, 62, 2023
2IJG
DownloadVisualize
BU of 2ijg by Molmil
Crystal Structure of cryptochrome 3 from Arabidopsis thaliana
Descriptor: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, Cryptochrome DASH, chloroplast/mitochondrial, ...
Authors:Huang, Y, Deisenhofer, J.
Deposit date:2006-09-29
Release date:2006-11-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity
Proc.Natl.Acad.Sci.Usa, 103, 2006
3DVU
DownloadVisualize
BU of 3dvu by Molmil
Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and the Beclin 1 BH3 domain
Descriptor: Beclin-1, V-bcl-2
Authors:Sinha, S.
Deposit date:2008-07-20
Release date:2008-10-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of the regulation of Beclin 1-dependent autophagy by the gamma-herpesvirus 68 Bcl-2 homolog M11.
Autophagy, 4, 2008
5HHE
DownloadVisualize
BU of 5hhe by Molmil
Human Beclin 1 coiled-coil domain
Descriptor: Beclin-1
Authors:Mei, Y, Sinha, S.
Deposit date:2016-01-10
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Identification of BECN1 and ATG14 Coiled-Coil Interface Residues That Are Important for Starvation-Induced Autophagy.
Biochemistry, 55, 2016
5K9L
DownloadVisualize
BU of 5k9l by Molmil
Beclin 2 CCD N187L mutant homodimer
Descriptor: Beclin-2
Authors:Su, M, Sinha, S.
Deposit date:2016-06-01
Release date:2017-03-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:BECN2 interacts with ATG14 through a metastable coiled-coil to mediate autophagy.
Protein Sci., 26, 2017
5K7B
DownloadVisualize
BU of 5k7b by Molmil
Beclin 2 CCD homodimer
Descriptor: Beclin-2
Authors:Su, M, Sinha, S.
Deposit date:2016-05-25
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:BECN2 interacts with ATG14 through a metastable coiled-coil to mediate autophagy.
Protein Sci., 26, 2017
5EFM
DownloadVisualize
BU of 5efm by Molmil
Beclin 1 Flexible-helical Domian (FHD) (141-171)
Descriptor: Beclin-1, SULFATE ION
Authors:Sinha, S, Mei, Y.
Deposit date:2015-10-23
Release date:2016-07-20
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Conformational Flexibility Enables the Function of a BECN1 Region Essential for Starvation-Mediated Autophagy.
Biochemistry, 55, 2016

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon