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8A0C
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BU of 8a0c by Molmil
Capsular polysaccharide synthesis multienzyme in complex with CMP
Descriptor: Bcs3, CYTIDINE-5'-MONOPHOSPHATE, GLYCEROL, ...
Authors:Cifuente, J.O, Schulze, J, Bethe, A, Di Domenico, V, Litschko, C, Budde, I, Eidenberger, L, Thiesler, H, Ramon-Roth, I, Berger, M, Claus, H, DAngelo, C, Marina, A, Gerardy-Schahn, R, Schubert, M, Guerin, M.E, Fiebig, T.
Deposit date:2022-05-27
Release date:2023-04-26
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Nat.Chem.Biol., 19, 2023
8A0M
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BU of 8a0m by Molmil
Capsular polysaccharide synthesis multienzyme in complex with capsular polymer fragment
Descriptor: Bcs3, MAGNESIUM ION, beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate
Authors:Cifuente, J.O, Schulze, J, Bethe, A, Di Domenico, V, Litschko, C, Budde, I, Eidenberger, L, Thiesler, H, Ramon-Roth, I, Berger, M, Claus, H, DAngelo, C, Marina, A, Gerardy-Schahn, R, Schubert, M, Guerin, M.E, Fiebig, T.
Deposit date:2022-05-29
Release date:2023-04-26
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Nat.Chem.Biol., 19, 2023
6R8B
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BU of 6r8b by Molmil
Escherichia coli AGPase in complex with FBP.
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-04-01
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM
Biorxiv, 2020
6R8U
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BU of 6r8u by Molmil
Escherichia coli AGPase in complex with AMP.
Descriptor: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-04-02
Release date:2020-02-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM
Biorxiv, 2020
6SHN
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BU of 6shn by Molmil
Escherichia coli AGPase in complex with FBP. Symmetry C1
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-08-07
Release date:2020-02-05
Last modified:2021-07-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM.
Curr Res Struct Biol, 2, 2020
6SHJ
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BU of 6shj by Molmil
Escherichia coli AGPase in complex with FBP. Symmetry applied C2
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-08-07
Release date:2020-02-05
Last modified:2021-07-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM.
Curr Res Struct Biol, 2, 2020
6SHQ
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BU of 6shq by Molmil
Escherichia coli AGPase in complex with AMP. Symmetry C2
Descriptor: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-08-07
Release date:2020-02-05
Last modified:2021-07-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM.
Curr Res Struct Biol, 2, 2020
6SI8
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BU of 6si8 by Molmil
Escherichia coli AGPase in complex with AMP.
Descriptor: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-08-09
Release date:2020-02-05
Last modified:2021-07-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM.
Curr Res Struct Biol, 2, 2020
5L6S
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BU of 5l6s by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a positive allosteric regulator beta-fructose-1,6-diphosphate (FBP) - AGPase*FBP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase, SULFATE ION
Authors:Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
5L6V
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BU of 5l6v by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a negative allosteric regulator adenosine monophosphate (AMP) - AGPase*AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase, PHOSPHATE ION, ...
Authors:Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.667 Å)
Cite:Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
5MNI
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BU of 5mni by Molmil
Escherichia coli AGPase mutant R130A apo form
Descriptor: Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, Marina, A, Orrantia, A, Eguskiza, A, Guerin, M.E.
Deposit date:2016-12-13
Release date:2017-03-01
Last modified:2017-04-26
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Mechanistic insights into the allosteric regulation of bacterial ADP-glucose pyrophosphorylases.
J. Biol. Chem., 292, 2017
7ZO0
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BU of 7zo0 by Molmil
Crystal structure of catalytic inactive unliganded form of FucOB, a GH95 family alpha-1,2-fucosidase from Akkermansia muciniphila
Descriptor: GH95 family alpha-1,2-fucosidase, GLYCEROL
Authors:Anso, I, Cifuente, J.O, Trastoy, B, Guerin, M.E.
Deposit date:2022-04-23
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Turning universal O into rare Bombay type blood.
Nat Commun, 14, 2023
7ZNZ
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BU of 7znz by Molmil
Crystal structure of unliganded form of FucOB, a GH95 family alpha-1,2-fucosidase from Akkermansia muciniphila
Descriptor: FucOB, a GH95 family alpha-1,2-fucosidase, GLYCEROL
Authors:Anso, I, Cifuente, J.O, Trastoy, B, Guerin, M.E.
Deposit date:2022-04-23
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Turning universal O into rare Bombay type blood.
Nat Commun, 14, 2023
8A64
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BU of 8a64 by Molmil
cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1.
Descriptor: Endo-beta-N-acetylglucosaminidase F2, Immunoglobulin gamma-1 heavy chain, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Trastoy, B, Cifuente, J.O, Du, J.J, Sundberg, E.J, Guerin, M.E.
Deposit date:2022-06-16
Release date:2023-04-05
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Mechanism of antibody-specific deglycosylation and immune evasion by Streptococcal IgG-specific endoglycosidases.
Nat Commun, 14, 2023
8C0B
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BU of 8c0b by Molmil
CryoEM structure of Aspergillus nidulans UTP-glucose-1-phosphate uridylyltransferase
Descriptor: UTP--glucose-1-phosphate uridylyltransferase
Authors:Han, X, D Angelo, C, Otamendi, A, Cifuente, J.O, de Astigarraga, E, Ochoa-Lizarralde, B, Grininger, M, Routier, F.H, Guerin, M.E, Fuehring, J, Etxebeste, O, Connell, S.R.
Deposit date:2022-12-16
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Molecular mechanism of UDP-Glc biosynthesis by the essential UDP-Glc pyrophosphorylase from Aspergillus nidulans
To Be Published
5F31
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BU of 5f31 by Molmil
Crystal structure of membrane associated PatA from Mycobacterium smegmatis in complex with palmitate - P 42 21 2 space group
Descriptor: ETHANOL, PALMITIC ACID, Phosphatidylinositol mannoside acyltransferase, ...
Authors:Albesa-Jove, D, Svetlikova, Z, Carreras-Gonzalez, A, Tersa, M, Sancho-Vaello, E, Cifuente, J.O, Mikusova, K, Guerin, M.E.
Deposit date:2015-12-02
Release date:2016-03-09
Last modified:2016-03-23
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural basis for selective recognition of acyl chains by the membrane-associated acyltransferase PatA.
Nat Commun, 7, 2016
5F2Z
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BU of 5f2z by Molmil
Crystal structure of membrane associated PatA from Mycobacterium smegmatis in complex with palmitate - P21 space group
Descriptor: PALMITIC ACID, Phosphatidylinositol mannoside acyltransferase
Authors:Albesa-Jove, D, Svetlikova, Z, Carreras-Gonzalez, A, Tersa, M, Sancho-Vaello, E, Cifuente, J.O, Mikusova, K, Guerin, M.E.
Deposit date:2015-12-02
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for selective recognition of acyl chains by the membrane-associated acyltransferase PatA.
Nat Commun, 7, 2016
5F2T
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BU of 5f2t by Molmil
Crystal structure of membrane associated PatA from Mycobacterium smegmatis in complex with palmitate - C 2 space group
Descriptor: MAGNESIUM ION, PALMITIC ACID, Phosphatidylinositol mannoside acyltransferase
Authors:Albesa-Jove, D, Svetlikova, Z, Carreras-Gonzalez, A, Tersa, M, Sancho-Vaello, E, Cifuente, J.O, Mikusova, K, Guerin, M.E.
Deposit date:2015-12-02
Release date:2016-03-09
Last modified:2016-03-23
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural basis for selective recognition of acyl chains by the membrane-associated acyltransferase PatA.
Nat Commun, 7, 2016
5F34
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BU of 5f34 by Molmil
Crystal structure of membrane associated PatA from Mycobacterium smegmatis in complex with S-hexadecyl Coenzyme A - P21 space group
Descriptor: Phosphatidylinositol mannoside acyltransferase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{S})-4-[[3-(2-hexadecylsulfanylethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate
Authors:Albesa-Jove, D, Svetlikova, Z, Carreras-Gonzalez, A, Tersa, M, Sancho-Vaello, E, Cifuente, J.O, Mikusova, K, Guerin, M.E.
Deposit date:2015-12-02
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.281 Å)
Cite:Structural basis for selective recognition of acyl chains by the membrane-associated acyltransferase PatA.
Nat Commun, 7, 2016
3IYP
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BU of 3iyp by Molmil
The Interaction of Decay-accelerating Factor with Echovirus 7
Descriptor: Capsid protein, Complement decay-accelerating factor, LAURIC ACID, ...
Authors:Plevka, P, Hafenstein, S, Zhang, Y, Harris, K.G, Cifuente, J.O, Bowman, V.D, Chipman, P.R, Lin, F, Medof, D.E, Bator, C.M, Rossmann, M.G.
Deposit date:2010-04-07
Release date:2010-11-24
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Interaction of decay-accelerating factor with echovirus 7.
J.Virol., 84, 2010
3J3Z
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BU of 3j3z by Molmil
Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment
Descriptor: MA28-7 neutralizing antibody heavy chain, MA28-7 neutralizing antibody light chain
Authors:Lee, H, Cifuente, J.O, Ashley, R.E, Conway, J.F, Makhov, A.M, Tano, Y, Shimizu, H, Nishimura, Y, Hafenstein, S.
Deposit date:2013-05-21
Release date:2013-08-28
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (23.4 Å)
Cite:A strain-specific epitope of enterovirus 71 identified by cryo-electron microscopy of the complex with fab from neutralizing antibody.
J.Virol., 87, 2013
3J91
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BU of 3j91 by Molmil
Cryo-electron microscopy of Enterovirus 71 (EV71) procapsid in complex with Fab fragments of neutralizing antibody 22A12
Descriptor: VP0, VP1, VP3
Authors:Shingler, K.L, Cifuente, J.O, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
Deposit date:2014-11-24
Release date:2014-12-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro.
J.Virol., 89, 2015
3J93
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BU of 3j93 by Molmil
Fitting of Fab into the cryoEM density map of EV71 procapsid in complex with Fab22A12
Descriptor: neutralizing antibody 22A12, heavy chain, light chain
Authors:Shingler, K.L, Cifuente, J.O, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
Deposit date:2014-12-02
Release date:2014-12-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro.
J.Virol., 89, 2015
4Y6U
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BU of 4y6u by Molmil
Mycobacterial protein
Descriptor: 1,2-ETHANEDIOL, 3-PHOSPHOGLYCERIC ACID, CHLORIDE ION, ...
Authors:Albesa-Jove, D, Rodrigo-Unzueta, A, Cifuente, J.O, Urresti, S, Comino, N, Sancho-Vaello, E, Guerin, M.E.
Deposit date:2015-02-13
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.271 Å)
Cite:A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase.
Angew.Chem.Int.Ed.Engl., 54, 2015
4Y6N
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BU of 4y6n by Molmil
Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate-glucose (UDP-Glc) and phosphoglyceric acid (PGA) - GpgS Mn2+ UDP-Glc PGA-1
Descriptor: 1,2-ETHANEDIOL, 3-PHOSPHOGLYCERIC ACID, Glucosyl-3-phosphoglycerate synthase, ...
Authors:Albesa-Jove, D, Rodrigo-Unzueta, A, Cifuente, J.O, Urresti, S, Comino, N, Sancho-Vaello, E, Guerin, M.E.
Deposit date:2015-02-13
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.348 Å)
Cite:A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase.
Angew.Chem.Int.Ed.Engl., 54, 2015

 

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