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1C11
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BU of 1c11 by Molmil
INTERCALATED D(TCCCGTTTCCA) DIMER, NMR, 7 STRUCTURES
Descriptor: DNA (5'-D(*TP*CP*CP*CP*GP*TP*TP*TP*CP*CP*A)-3')
Authors:Gallego, J, Chou, S.H, Reid, B.R.
Deposit date:1998-07-15
Release date:1998-07-22
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Centromeric pyrimidine strands fold into an intercalated motif by forming a double hairpin with a novel T:G:G:T tetrad: solution structure of the d(TCCCGTTTCCA) dimer.
J.Mol.Biol., 273, 1997
4YP1
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BU of 4yp1 by Molmil
Misting with CDA
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Stimulator of interferon genes protein
Authors:Chin, K.H, Chen, C.K, Tu, Z.I, Chou, S.H.
Deposit date:2015-03-12
Release date:2015-10-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Insights into the Distinct Binding Mode of Cyclic Di-AMP with SaCpaA_RCK.
Biochemistry, 54, 2015
4YS2
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BU of 4ys2 by Molmil
RCK domain with CDA
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Na+/H+ antiporter-like protein
Authors:Chin, K.H, Chou, S.H.
Deposit date:2015-03-16
Release date:2016-04-27
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.968 Å)
Cite:RCK domain with CDA
To Be Published
2ZE3
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BU of 2ze3 by Molmil
Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus
Descriptor: 2-OXOGLUTARIC ACID, DFA0005
Authors:Liao, C.J, Chin, K.H, Chou, S.H.
Deposit date:2007-12-05
Release date:2008-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of DFA0005 complexed with alpha-ketoglutarate: a novel member of the ICL/PEPM superfamily from alkali-tolerant Deinococcus ficus
Proteins, 73, 2008
2FA5
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BU of 2fa5 by Molmil
The crystal structure of an unliganded multiple antibiotic-resistance repressor (MarR) from Xanthomonas campestris
Descriptor: CHLORIDE ION, transcriptional regulator marR/emrR family
Authors:Chin, K.H, Tu, Z.L, Li, J.N, Chou, C.C, Wang, A.H.J, Chou, S.H.
Deposit date:2005-12-06
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of XC1739: a putative multiple antibiotic-resistance repressor (MarR) from Xanthomonas campestris at 1.8 A resolution
Proteins, 65, 2006
2FUJ
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BU of 2fuj by Molmil
A putative acyl-CoA thioesterase from Xanthomonas campestris (XC229)
Descriptor: conserved hypothetical protein
Authors:Chin, K.H, Chou, C.C, Wang, A.H, Chou, S.H.
Deposit date:2006-01-27
Release date:2006-07-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a putative acyl-CoA thioesterase from Xanthomonas campestris (XC229) adopts a tetrameric hotdog fold of epsilongamma mode.
Proteins, 64, 2006
2FUK
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BU of 2fuk by Molmil
Crystal structure of XC6422 from Xanthomonas campestris: a member of a/b serine hydrolase without lid at 1.6 resolution
Descriptor: XC6422 protein
Authors:Yang, C.Y, Chin, K.H, Chou, C.C, Wang, A.H.J, Chou, S.H.
Deposit date:2006-01-27
Release date:2006-07-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of XC6422 from Xanthomonas campestris at 1.6 A resolution: a small serine alpha/beta-hydrolase
Acta Crystallogr.,Sect.F, 62, 2006
2GBZ
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BU of 2gbz by Molmil
The Crystal Structure of XC847 from Xanthomonas campestris: a 3-5 Oligoribonuclease of DnaQ fold family with a Novel Opposingly-Shifted Helix
Descriptor: MAGNESIUM ION, Oligoribonuclease
Authors:Chin, K.H, Yang, C.Y, Chou, C.C, Wang, A.H.J, Chou, S.H.
Deposit date:2006-03-12
Release date:2007-01-16
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of XC847 from Xanthomonas campestris: a 3'-5' oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix
Proteins, 65, 2006
1P0U
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BU of 1p0u by Molmil
Sheared G/C Base Pair
Descriptor: 5'-D(*GP*CP*AP*TP*CP*GP*AP*CP*GP*AP*TP*GP*C)-3'
Authors:Chin, K.H, Chou, S.H.
Deposit date:2003-04-11
Release date:2003-06-03
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Sheared-type G(anti).C(syn) Base-pair: A Unique d(GXC) Loop Closure Motif.
J.Mol.Biol., 329, 2003
3DSG
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BU of 3dsg by Molmil
XC1028 from Xanthomonas campestris Adopts a PilZ Domain-like Structure Yet with Trivial c-di-GMP Binding Activity
Descriptor: Type IV fimbriae assembly protein
Authors:Li, T.N, Chin, K.H, Liu, J.H, Wang, A.H.J, Chou, S.H.
Deposit date:2008-07-12
Release date:2009-05-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:XC1028 from Xanthomonas campestris adopts a PilZ domain-like structure without a c-di-GMP switch.
Proteins, 75, 2009
1L3M
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BU of 1l3m by Molmil
The Solution Structure of [d(CGC)r(amamam)d(TTTGCG)]2
Descriptor: 5'-D(*CP*GP*C)-R(P*(A39)P*(A39)P*(A39))-D(P*TP*TP*TP*GP*CP*G)-3'
Authors:Tsao, Y.P, Wang, L.Y, Hsu, S.T, Jain, M.L, Chou, S.H, Huang, W.C, Cheng, J.W.
Deposit date:2002-02-28
Release date:2002-04-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of [d(CGC)r(amamam)d(TTTGCG)]2.
J.Biomol.NMR, 21, 2001
4KBY
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BU of 4kby by Molmil
mSTING/c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Stimulator of interferon genes protein
Authors:Chin, K.H, Su, Y.C, Tu, J.L, Chou, S.H.
Deposit date:2013-04-24
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Novel c-di-GMP recognition modes of the mouse innate immune adaptor protein STING
Acta Crystallogr.,Sect.D, 69, 2013
4KC0
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BU of 4kc0 by Molmil
mSTING
Descriptor: Stimulator of interferon genes protein
Authors:Chin, K.H, Su, Y.C, Tu, J.L, Chou, S.H.
Deposit date:2013-04-24
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel c-di-GMP recognition modes of the mouse innate immune adaptor protein STING
Acta Crystallogr.,Sect.D, 69, 2013
3IWZ
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BU of 3iwz by Molmil
The c-di-GMP Responsive Global Regulator CLP Links Cell-Cell Signaling to Virulence Gene Expression in Xanthomonas campestris
Descriptor: Catabolite activation-like protein
Authors:Chin, K.H, Tu, Z.L, Tseng, Y.H, Dow, J.M, Wang, A.H.J, Chou, S.H.
Deposit date:2009-09-03
Release date:2009-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris.
J.Mol.Biol., 396, 2010
2GSC
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BU of 2gsc by Molmil
Crystal Structure of the Conserved Hypothetical Cytosolic Protein Xcc0516 from Xanthomonas campestris
Descriptor: Putative uncharacterized protein XCC0516
Authors:Lin, L.Y, Ching, C.L, Chin, K.H, Chou, S.H, Chan, N.L.
Deposit date:2006-04-26
Release date:2006-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of the conserved hypothetical cytosolic protein Xcc0516 from Xanthomonas campestris reveals a novel quaternary structure assembled by five four-helix bundles.
Proteins, 65, 2006
103D
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BU of 103d by Molmil
THE UNUSUAL STRUCTURE OF THE HUMAN CENTROMERE (GGA)2 MOTIF: UNPAIRED GUANOSINE RESIDUES STACKED BETWEEN SHEARED G(DOT)A PAIRS
Descriptor: DNA (5'-D(*GP*TP*GP*GP*AP*AP*TP*GP*GP*AP*AP*C)-3')
Authors:Chou, S.-H, Zhu, L, Reid, B.R.
Deposit date:1994-12-16
Release date:1995-03-31
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The unusual structure of the human centromere (GGA)2 motif. Unpaired guanosine residues stacked between sheared G.A pairs.
J.Mol.Biol., 244, 1994
175D
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BU of 175d by Molmil
THE DNA SEQUENCE GCGAATGAGC CONTAINING THE HUMAN CENTROMERE CORE SEQUENCE GAAT FORMS A SELF-COMPLEMENTARY DUPLEX WITH SHEARED G:A PAIRS IN SOLUTION
Descriptor: DNA (5'-D(*GP*CP*GP*AP*AP*TP*GP*AP*GP*C)-3')
Authors:Chou, S.-H, Cheng, J.-W, Fedoroff, O, Reid, B.R.
Deposit date:1994-04-29
Release date:1994-09-30
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:DNA sequence GCGAATGAGC containing the human centromere core sequence GAAT forms a self-complementary duplex with sheared G.A pairs in solution.
J.Mol.Biol., 241, 1994
1BJH
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BU of 1bjh by Molmil
HAIRPIN LOOPS CONSISTING OF SINGLE ADENINE RESIDUES CLOSED BY SHEARED A(DOT)A AND G(DOT)G PAIRS FORMED BY THE DNA TRIPLETS AAA AND GAG: SOLUTION STRUCTURE OF THE D(GTACAAAGTAC) HAIRPIN, NMR, 16 STRUCTURES
Descriptor: DNA (5'-D(*GP*TP*AP*CP*AP*AP*AP*GP*TP*AP*C)-3')
Authors:Chou, S.-H, Zhu, L, Gao, Z, Cheng, J.-W, Reid, B.R.
Deposit date:1997-07-25
Release date:1997-12-03
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Hairpin loops consisting of single adenine residues closed by sheared A.A and G.G pairs formed by the DNA triplets AAA and GAG: solution structure of the d(GTACAAAGTAC) hairpin.
J.Mol.Biol., 264, 1996
1D69
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BU of 1d69 by Molmil
SOLUTION STRUCTURE OF [D(ATGAGCGAATA)]2: ADJACENT G:A MISMATCHES STABILIZED BY CROSS-STRAND BASE-STACKING AND BII PHOSPHATE GROUPS
Descriptor: DNA (5'-D(P*AP*TP*GP*AP*GP*CP*GP*AP*AP*TP*A)-3')
Authors:Chou, S.-H, Cheng, J.-W, Reid, B.R.
Deposit date:1992-04-15
Release date:1993-04-15
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of [d(ATGAGCGAATA)]2. Adjacent G:A mismatches stabilized by cross-strand base-stacking and BII phosphate groups.
J.Mol.Biol., 228, 1992
1L1V
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BU of 1l1v by Molmil
UNUSUAL ACTD/DNA_TA COMPLEX STRUCTURE
Descriptor: 5'-D(*GP*TP*CP*AP*CP*CP*GP*AP*C)-3', ACTINOMYCIN D
Authors:Chou, S.-H, Chin, K.-H, Chen, F.-M.
Deposit date:2002-02-20
Release date:2002-03-06
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Looped Out and Perpendicular: Deformation of Watson-Crick Base Pair Associated with Actinomycin D Binding.
Proc.Natl.Acad.Sci.USA, 99, 2002
1D68
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BU of 1d68 by Molmil
SOLUTION STRUCTURE OF [D(GCGTATACGC)]2
Descriptor: DNA (5'-D(P*GP*CP*GP*TP*AP*TP*AP*CP*GP*C)-3')
Authors:Cheng, J.-W, Chou, S.-H, Salazar, M, Reid, B.R.
Deposit date:1992-04-15
Release date:1993-04-15
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of [d(GCGTATACGC)]2.
J.Mol.Biol., 228, 1992
1CHV
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BU of 1chv by Molmil
ELUCIDATION OF THE SOLUTION STRUCTURE OF CARDIOTOXIN ANALOGUE V FROM THE TAIWAN COBRA (NAJA NAJA ATRA) VENOM
Descriptor: PROTEIN (CARDIOTOXIN ANALOGUE V)
Authors:Jayaraman, G, Kumar, T.K.S, Tsai, C.C, Yu, C.
Deposit date:1999-03-30
Release date:2000-03-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Elucidation of the solution structure of cardiotoxin analogue V from the Taiwan cobra (Naja naja atra)--identification of structural features important for the lethal action of snake venom cardiotoxins
Protein Sci., 9, 2000
1ZHU
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BU of 1zhu by Molmil
DNA (5'-D(*CP*AP*AP*TP*GP*CP*AP*AP*TP*G)-3'), NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*CP*AP*AP*TP*GP*CP*AP*AP*TP*G)-3')
Authors:Zhu, L, Chou, S.-H, Xu, J, Reid, B.R.
Deposit date:1996-01-24
Release date:1996-07-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structure of a single-cytidine hairpin loop formed by the DNA triplet GCA.
Nat.Struct.Biol., 2, 1995
2M87
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BU of 2m87 by Molmil
Structural Basis of DNA Recognition by the Effector Domain of Klebsiella pneumoniae PmrA
Descriptor: Transcriptional regulatory protein basR/pmrA
Authors:Wang, I, Lou, Y.C, Chen, C.
Deposit date:2013-05-07
Release date:2014-01-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure and tandem DNA recognition of the C-terminal effector domain of PmrA from Klebsiella pneumoniae.
Nucleic Acids Res., 42, 2014
7X9F
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BU of 7x9f by Molmil
Crystal structure of actinomycin D-echinomycin-d(AGCGCGT/ACGCGCT) complex
Descriptor: 2-CARBOXYQUINOXALINE, DNA (5'-D(P*AP*CP*GP*CP*GP*CP*T)-3'), DNA (5'-D(P*AP*GP*CP*GP*CP*GP*T)-3'), ...
Authors:Kao, S.H, Satange, R.B, Hou, M.H.
Deposit date:2022-03-15
Release date:2022-12-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Staggered intercalation of DNA duplexes with base-pair modulation by two distinct drug molecules induces asymmetric backbone twisting and structure polymorphism.
Nucleic Acids Res., 50, 2022

 

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