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2M58
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BU of 2m58 by Molmil
Structure of 2'-5' AG1 lariat forming ribozyme in its inactive state
Descriptor: RNA (59-MER)
Authors:Carlomagno, T, Amata, I, Codutti, L, Falb, M, Fohrer, J, Simon, B.
Deposit date:2013-02-18
Release date:2013-04-03
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural principles of RNA catalysis in a 2'-5' lariat-forming ribozyme.
J.Am.Chem.Soc., 135, 2013
8AOU
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BU of 8aou by Molmil
Solution NMR structure of full-length Nsp1 from SARS-CoV-2.
Descriptor: Host translation inhibitor nsp1
Authors:Wang, Y, Kirkpatrick, J.P, Carlomagno, T.
Deposit date:2022-08-08
Release date:2022-12-28
Last modified:2023-02-15
Method:SOLUTION NMR
Cite:Structural insights into the activity regulation of full-length non-structural protein 1 from SARS-CoV-2.
Structure, 31, 2023
1OJ5
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BU of 1oj5 by Molmil
Crystal structure of the Nco-A1 PAS-B domain bound to the STAT6 transactivation domain LXXLL motif
Descriptor: IODIDE ION, SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6, STEROID RECEPTOR COACTIVATOR 1A
Authors:Razeto, A, Ramakrishnan, V, Giller, K, Lakomek, N, Carlomagno, T, Griesinger, C, Lodrini, M, Litterst, C.M, Pftizner, E, Becker, S.
Deposit date:2003-07-02
Release date:2004-02-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of the Ncoa-1/Src-1 Pas-B Domain Bound to the Lxxll Motif of the Stat6 Transactivation Domain
J.Mol.Biol., 336, 2004
6O22
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BU of 6o22 by Molmil
Structure of Asf1-H3:H4-Rtt109-Vps75 histone chaperone-lysine acetyltransferase complex with the histone substrate.
Descriptor: Histone H3.2, Histone H4, Histone acetyltransferase RTT109, ...
Authors:Danilenko, N, Carlomagno, T, Kirkpatrick, J.P.
Deposit date:2019-02-22
Release date:2019-07-31
Last modified:2019-08-14
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Histone chaperone exploits intrinsic disorder to switch acetylation specificity.
Nat Commun, 10, 2019
6ZDT
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BU of 6zdt by Molmil
Crystal structure of eukaryotic Fibrillarin with Nop56 N-terminal domain
Descriptor: Nucleolar protein 56, rRNA 2'-O-methyltransferase fibrillarin
Authors:Hoefler, S, Lukat, P, Carlomagno, T, Blankenfeldt, W.
Deposit date:2020-06-15
Release date:2021-02-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:High-resolution structure of eukaryotic Fibrillarin interacting with Nop56 amino-terminal domain.
Rna, 27, 2021
6F0Y
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BU of 6f0y by Molmil
Rtt109 peptide bound to Asf1
Descriptor: Histone chaperone ASF1, histone acetyltransferase Rtt109 C-terminus
Authors:Lercher, L, Kirkpatrick, J.P, Carlomagno, T.
Deposit date:2017-11-21
Release date:2017-12-27
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structural characterization of the Asf1-Rtt109 interaction and its role in histone acetylation.
Nucleic Acids Res., 46, 2018
2KDU
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BU of 2kdu by Molmil
Structural basis of the Munc13-1/Ca2+-Calmodulin interaction: A novel 1-26 calmodulin binding motif with a bipartite binding mode
Descriptor: CALCIUM ION, Calmodulin, Protein unc-13 homolog A
Authors:Rodriguez-Castaneda, F.A, Maestre-Martinez, M, Coudevylle, N, Dimova, K, Jahn, O, Junge, H, Becker, S, Brose, N, Carlomagno, T, Griesinger, C.
Deposit date:2009-01-19
Release date:2009-12-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Modular architecture of Munc13/calmodulin complexes: dual regulation by Ca2+ and possible function in short-term synaptic plasticity.
Embo J., 29, 2010
5A18
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BU of 5a18 by Molmil
The structure of the SOLE element of oskar mRNA
Descriptor: OSKAR MRNA
Authors:Simon, B, Masiewicz, P, Ephrussi, A, Carlomagno, T.
Deposit date:2015-04-28
Release date:2015-05-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Structure of the Sole Element of Oskar Mrna.
RNA, 21, 2015
5A17
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BU of 5a17 by Molmil
The structure of the SOLE element of oskar mRNA
Descriptor: OSKAR MRNA
Authors:Simon, B, Masiewicz, P, Ephrussi, A, Carlomagno, T.
Deposit date:2015-04-28
Release date:2015-05-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Structure of the Sole Element of Oskar Mrna.
RNA, 21, 2015
6ROZ
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BU of 6roz by Molmil
Structure of the N-SH2 domain of the human tyrosine-protein phosphatase non-receptor type 11 in complex with the phosphorylated immune receptor tyrosine-based switch motif
Descriptor: Tyrosine-protein phosphatase non-receptor type 11, immune receptor tyrosine-based switch motif (ITSM)
Authors:Krausze, J, Sikorska, J, Carlomagno, T.
Deposit date:2019-05-13
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Molecular mechanism of SHP2 activation by PD-1 stimulation.
Sci Adv, 6, 2020
6ROY
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BU of 6roy by Molmil
Structure of the N-SH2 domain of the human tyrosine-protein phosphatase non-receptor type 11 in complex with the phosphorylated immune receptor tyrosine-based inhibitory motif
Descriptor: Tyrosine-protein phosphatase non-receptor type 11, immune receptor tyrosine-based inhibitory motif (ITIM)
Authors:Krausze, J, Sikorska, J, Carlomagno, T.
Deposit date:2019-05-13
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of SHP2 activation by PD-1 stimulation.
Sci Adv, 6, 2020
7OC3
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BU of 7oc3 by Molmil
Crystal structure of the third tudor domain of Qin
Descriptor: PHOSPHATE ION, Qin
Authors:Dhimole, N, Klug, W, Carlomagno, T.
Deposit date:2021-04-25
Release date:2022-05-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the third tudor domain of Qin
To Be Published
7OZQ
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BU of 7ozq by Molmil
Crystal structure of archaeal L7Ae bound to eukaryotic kink-loop
Descriptor: 50S ribosomal protein L7Ae, ACETATE ION, CALCIUM ION, ...
Authors:Hoefler, S, Lukat, P, Carlomagno, T, Blankenfeldt, W.
Deposit date:2021-06-28
Release date:2021-10-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Eukaryotic Box C/D methylation machinery has two non-symmetric protein assembly sites.
Sci Rep, 11, 2021
4BD3
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BU of 4bd3 by Molmil
Phf19 links methylated lysine 36 of histone H3 to regulation of Polycomb activity
Descriptor: HISTONE H3, PHD FINGER PROTEIN 19
Authors:Lapinaite, A, Simon, B, Carlomagno, T.
Deposit date:2012-10-04
Release date:2012-10-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Phf19 Links Methylated Lys36 of Histone H3 to Regulation of Polycomb Activity
Nat.Struct.Mol.Biol., 19, 2012
4BY9
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BU of 4by9 by Molmil
The structure of the Box CD enzyme reveals regulation of rRNA methylation
Descriptor: 5'-R(*UP*CP*GP*CP*CP*CP*AP*UP*CP*AP*CP)-3', 50S RIBOSOMAL PROTEIN L7AE, FIBRILLARIN-LIKE RRNA/TRNA 2'-O-METHYLTRANSFERASE, ...
Authors:Lapinaite, A, Simon, B, Skjaerven, L, Rakwalska-Bange, M, Gabel, F, Carlomagno, T.
Deposit date:2013-07-18
Release date:2013-10-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Structure of the Box C/D Enzyme Reveals Regulation of RNA Methylation.
Nature, 502, 2013
2XEB
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BU of 2xeb by Molmil
NMR STRUCTURE OF THE PROTEIN-UNBOUND SPLICEOSOMAL U4 SNRNA 5' STEM LOOP
Descriptor: 5'-R(P*GP*AP*UP*CP*GP*UP*AP*GP*CP*CP*AP*AP*UP*GP*AP* GP*GP*UP*U)-3', 5'-R(P*GP*CP*CP*GP*AP*GP*GP*CP*GP*CP*GP*AP*UP*C)-3'
Authors:Falb, M, Amata, I, Gabel, F, Simon, B, Carlomagno, T.
Deposit date:2010-05-12
Release date:2010-05-26
Last modified:2018-01-17
Method:SOLUTION NMR
Cite:Structure of the K-turn U4 RNA: a combined NMR and SANS study.
Nucleic Acids Res., 38, 2010
2XFM
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BU of 2xfm by Molmil
Complex structure of the MIWI Paz domain bound to methylated single stranded RNA
Descriptor: 5'-R(*AP*CP*CP*GP*AP*CP*UP*(OMU)P)-3', PIWI-LIKE PROTEIN 1
Authors:Simon, B, Kirkpatrick, J.P, Eckhardt, S, Sehr, P, Andrade-Navarro, M.A, Pillai, R.S, Carlomagno, T.
Deposit date:2010-05-27
Release date:2011-01-26
Last modified:2011-10-26
Method:SOLUTION NMR
Cite:Recognition of 2'-O-Methylated 3'-End of Pirna by the Paz Domain of a Piwi Protein.
Structure, 19, 2011
6TPH
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BU of 6tph by Molmil
Structure of a protein-RNA complex by ssNMR
Descriptor: 50S ribosomal protein L7Ae, RNA (26-MER)
Authors:Mumdooh, A, Marchanka, A, Carlomagno, T.
Deposit date:2019-12-13
Release date:2020-02-12
Last modified:2023-06-14
Method:SOLID-STATE NMR
Cite:Structure of a Protein-RNA Complex by Solid-State NMR Spectroscopy.
Angew.Chem.Int.Ed.Engl., 59, 2020
2N2P
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BU of 2n2p by Molmil
Solution structure of a double base-pair inversion mutant of murine tumour necrosis factor alpha CDE-23 RNA
Descriptor: RNA (5'-R(P*GP*CP*AP*UP*GP*UP*UP*UP*AP*GP*UP*GP*UP*CP*UP*AP*AP*AP*CP*GP*GP*UP*U)-3')
Authors:Codutti, L, Leppek, K, Zalesak, J, Windeisen, V, Masiewicz, P, Stoecklin, G, Carlomagno, T.
Deposit date:2015-05-11
Release date:2015-08-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Distinct, Sequence-Induced Conformation Is Required for Recognition of the Constitutive Decay Element RNA by Roquin.
Structure, 23, 2015
2N2O
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BU of 2n2o by Molmil
Structure of murine tumour necrosis factor alpha CDE RNA
Descriptor: RNA (5'-R(P*GP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*UP*U)-3')
Authors:Codutti, L, Leppek, K, Zalesak, J, Windeisen, V, Masiewicz, P, Stoecklin, G, Carlomagno, T.
Deposit date:2015-05-11
Release date:2015-08-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Distinct, Sequence-Induced Conformation Is Required for Recognition of the Constitutive Decay Element RNA by Roquin.
Structure, 23, 2015
2N0R
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BU of 2n0r by Molmil
RNA structure determination by solid-state NMR spectroscopy
Descriptor: RNA (5'-R(*GP*CP*UP*GP*AP*GP*CP*UP*CP*GP*AP*AP*AP*GP*AP*GP*CP*AP*AP*UP*GP*AP*UP*GP*UP*C)-3')
Authors:Marchanka, A, Simon, B, Althoff-Ospelt, G, Carlomagno, T.
Deposit date:2015-03-12
Release date:2015-05-20
Last modified:2023-06-14
Method:SOLID-STATE NMR
Cite:RNA structure determination by solid-state NMR spectroscopy.
Nat Commun, 6, 2015
7NXE
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BU of 7nxe by Molmil
Structure of the Phospholipase C gamma 1 tSH2 domain in complex with a phosphorylated KSHV pK15 peptide
Descriptor: Isoform 2 of 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1, Protein K15
Authors:Ssebyatika, G, Krey, T.
Deposit date:2021-03-18
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Recruitment of phospholipase C gamma 1 to the non-structural membrane protein pK15 of Kaposi Sarcoma-associated herpesvirus promotes its Src-dependent phosphorylation.
Plos Pathog., 17, 2021
6R5G
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BU of 6r5g by Molmil
C-SH2 domain of SHP-2 in complex with phospho-ITSM of PD-1
Descriptor: ITSM, Tyrosine-protein phosphatase non-receptor type 11
Authors:Marasco, M.
Deposit date:2019-03-25
Release date:2020-02-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Molecular mechanism of SHP2 activation by PD-1 stimulation.
Sci Adv, 6, 2020
4IE9
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BU of 4ie9 by Molmil
Bovine PKA C-alpha in complex with 3-pyridylmethyl-5-methyl-1H-pyrazole-3-carboxylate
Descriptor: GLYCEROL, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha, ...
Authors:Dreyer, M.K, Schiffer, A, Lodge, J.
Deposit date:2012-12-13
Release date:2013-05-01
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Accounting for Conformational Variability in Protein-Ligand Docking with NMR-Guided Rescoring
J.Am.Chem.Soc., 135, 2013
4IJ9
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BU of 4ij9 by Molmil
Bovine PKA C-alpha in complex with 2-[[5-(4-pyridyl)-1H-1,2,4-triazol-3-yl]sulfanyl]-1-(2-thiophenyl)ethanone
Descriptor: 2-[[5-(4-pyridyl)-1H-1,2,4-triazol-3-yl]sulfanyl]-1-(2-thiophenyl)ethanone, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Dreyer, M.K, Schiffer, A.
Deposit date:2012-12-21
Release date:2013-05-01
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Accounting for Conformational Variability in Protein-Ligand Docking with NMR-Guided Rescoring
J.Am.Chem.Soc., 135, 2013

 

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