Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4V5T
DownloadVisualize
BU of 4v5t by Molmil
X-ray structure of the Grapevine Fanleaf virus
Descriptor: COAT PROTEIN
Authors:Schellenberger, P, Sauter, C, Lorber, B, Bron, P, Trapani, S, Bergdoll, M, Marmonier, A, Schmitt-Keichinger, C, Lemaire, O, Demangeat, G, Ritzenthaler, C.
Deposit date:2011-02-01
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights Into Viral Determinants of Nematode Mediated Grapevine Fanleaf Virus Transmission.
Plos Pathog., 7, 2011
5FOJ
DownloadVisualize
BU of 5foj by Molmil
Cryo electron microscopy structure of Grapevine Fanleaf Virus complex with Nanobody
Descriptor: Nanobody, RNA2 polyprotein
Authors:Orlov, I, Hemmer, C, Ackerer, L, Lorber, B, Ghannam, A, Poignavent, V, Hleibieh, K, Sauter, C, Schmitt-Keichinger, C, Belval, L, Hily, J.M, Marmonier, A, Komar, V, Gersch, S, Schellenberger, P, Bron, P, Vigne, E, Muyldermans, S, Lemaire, O, Demangeat, G, Ritzenthaler, C, Klaholz, B.P.
Deposit date:2015-11-22
Release date:2016-01-20
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of nanobody recognition of grapevine fanleaf virus and of virus resistance loss.
Proc.Natl.Acad.Sci.USA, 2020
6QCC
DownloadVisualize
BU of 6qcc by Molmil
Cryo-EM Atomic Structure of Broad Bean Stain Virus (BBSV)
Descriptor: Large coat-protein subunit, Small coat-protein subunit
Authors:Lecorre, F, Lai Jee Him, J, Blanc, S, Zeddam, J.-L, Trapani, S, Bron, P.
Deposit date:2018-12-27
Release date:2019-05-01
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:The cryo-electron microscopy structure of Broad Bean Stain Virus suggests a common capsid assembly mechanism among comoviruses.
Virology, 530, 2019
7ZF2
DownloadVisualize
BU of 7zf2 by Molmil
Protomeric substructure from an octameric assembly of M. tuberculosis RNA polymerase in complex with sigma-b initiation factor
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Trapani, S, Bron, P, Lai Kee Him, J, Brodolin, K, Morichaud, Z, Vishwakarma, R.
Deposit date:2022-03-31
Release date:2023-02-08
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.86 Å)
Cite:Structural basis of the mycobacterial stress-response RNA polymerase auto-inhibition via oligomerization.
Nat Commun, 14, 2023
4V5I
DownloadVisualize
BU of 4v5i by Molmil
Structure of the Phage P2 Baseplate in its Activated Conformation with Ca
Descriptor: CALCIUM ION, ORF15, ORF16, ...
Authors:Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
Deposit date:2010-02-05
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5.464 Å)
Cite:Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
7BES
DownloadVisualize
BU of 7bes by Molmil
CryoEM structure of Mycobacterium tuberculosis UMP Kinase (UMPK) in complex with UDP and UTP
Descriptor: URIDINE 5'-TRIPHOSPHATE, URIDINE-5'-DIPHOSPHATE, Uridylate kinase
Authors:Bous, J, Trapani, S, Walter, P, Bron, P, Munier-Lehmann, H.
Deposit date:2020-12-24
Release date:2022-01-12
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis for the allosteric inhibition of UMP kinase from Gram-positive bacteria, a promising antibacterial target.
Febs J., 289, 2022
2Y26
DownloadVisualize
BU of 2y26 by Molmil
Transmission defective mutant of Grapevine Fanleaf virus
Descriptor: COAT PROTEIN
Authors:Schellenberger, P, Sauter, C, Lorber, B, Bron, P, Trapani, S, Bergdoll, M, Marmonier, A, Schmitt-Keichinger, C, Lemaire, O, Demangeat, G, Ritzenthaler, C.
Deposit date:2010-12-13
Release date:2011-06-08
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Insights Into Viral Determinants of Nematode Mediated Grapevine Fanleaf Virus Transmission.
Plos Pathog., 7, 2011
2X8K
DownloadVisualize
BU of 2x8k by Molmil
Crystal Structure of SPP1 Dit (gp 19.1) Protein, a Paradigm of Hub Adsorption Apparatus in Gram-positive Infecting Phages.
Descriptor: HYPOTHETICAL PROTEIN 19.1
Authors:Veesler, D, Robin, G, Lichiere, J, Auzat, I, Tavares, P, Bron, P, Campanacci, V, Cambillau, C.
Deposit date:2010-03-10
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of Bacteriophage Spp1 Distal Tail Protein (Gp 19.1): A Baseplate Hub Paradigm in Gram+ Infecting Phages.
J.Biol.Chem., 285, 2010
6S44
DownloadVisualize
BU of 6s44 by Molmil
Faba bean necrotic stunt virus (FBNSV)
Descriptor: Capsid protein
Authors:Trapani, S, Lai Kee Him, J, Blanc, S, Bron, P.
Deposit date:2019-06-26
Release date:2020-07-15
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structure-guided mutagenesis of the capsid protein indicates that a nanovirus requires assembled viral particles for systemic infection.
Plos Pathog., 19, 2023
6RTK
DownloadVisualize
BU of 6rtk by Molmil
CryoEM structure of modified Turnip Yellows Virus devoid of minor capsid protein readthrough domain
Descriptor: Major capsid protein
Authors:Trapani, S, Lai Kee Him, J, Hoh, F, Brault, V, Bron, P.
Deposit date:2019-05-24
Release date:2020-07-08
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:CryoEM structure of modified Turnip Yellows Virus devoid of minor capsid protein readthrough domain
To Be Published
3IYQ
DownloadVisualize
BU of 3iyq by Molmil
tmRNA-SmpB: a journey to the center of the bacterial ribosome
Descriptor: SsrA-binding protein, tmRNA
Authors:Weis, F, Bron, P, Giudice, E, Rolland, J.P, Thomas, D, Felden, B, Gillet, R.
Deposit date:2010-04-16
Release date:2010-10-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (13 Å)
Cite:tmRNA-SmpB: a journey to the centre of the bacterial ribosome.
Embo J., 29, 2010
3IYR
DownloadVisualize
BU of 3iyr by Molmil
tmRNA-SmpB: a journey to the center of the bacterial ribosome
Descriptor: SsrA-binding protein, tmRNA
Authors:Weis, F, Bron, P, Giudice, E, Rolland, J.P, Thomas, D, Felden, B, Gillet, R.
Deposit date:2010-04-16
Release date:2010-10-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (13 Å)
Cite:tmRNA-SmpB: a journey to the centre of the bacterial ribosome.
Embo J., 29, 2010
7R0C
DownloadVisualize
BU of 7r0c by Molmil
Structure of the AVP-V2R-arrestin2-ScFv30 complex
Descriptor: AVP, Arrestin2, ScFv30, ...
Authors:Bous, J, Fouillen, A, Trapani, S, Granier, S, Mouillac, B, Bron, P.
Deposit date:2022-02-01
Release date:2022-09-14
Method:ELECTRON MICROSCOPY (4.73 Å)
Cite:Structure of the vasopressin hormone-V2 receptor-beta-arrestin1 ternary complex.
Sci Adv, 8, 2022
7R0J
DownloadVisualize
BU of 7r0j by Molmil
Structure of the V2 receptor Cter-arrestin2-ScFv30 complex
Descriptor: Arrestin2, ScFv30, V2R Cter
Authors:Bous, J, Fouillen, A, Trapani, S, Granier, S, Mouillac, B, Bron, P.
Deposit date:2022-02-02
Release date:2022-09-14
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:Structure of the vasopressin hormone-V2 receptor-beta-arrestin1 ternary complex.
Sci Adv, 8, 2022
2WZP
DownloadVisualize
BU of 2wzp by Molmil
Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae
Descriptor: CAMELID VHH5, LACTOCOCCAL PHAGE P2 ORF15, LACTOCOCCAL PHAGE P2 ORF16, ...
Authors:Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
Deposit date:2009-12-01
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
2X53
DownloadVisualize
BU of 2x53 by Molmil
Structure of the phage p2 baseplate in its activated conformation with Sr
Descriptor: ORF15, ORF16, PUTATIVE RECEPTOR BINDING PROTEIN, ...
Authors:Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
Deposit date:2010-02-05
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
7BB7
DownloadVisualize
BU of 7bb7 by Molmil
AVP-V2R-Galphas-beta1-gamma2-Nb35(T state)
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Bous, J, Mouillac, B, Bron, P, Granier, S, Floquet, N, Leyrat, C.
Deposit date:2020-12-17
Release date:2021-06-02
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-electron microscopy structure of the antidiuretic hormone arginine-vasopressin V2 receptor signaling complex.
Sci Adv, 7, 2021
7BB6
DownloadVisualize
BU of 7bb6 by Molmil
AVP-V2R-Galphas-beta1-gamma2-Nb35 (L state)
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Bous, J, Mouillac, B, Bron, P, Granier, S, Floquet, N, Leyrat, C.
Deposit date:2020-12-17
Release date:2021-06-02
Last modified:2021-06-30
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-electron microscopy structure of the antidiuretic hormone arginine-vasopressin V2 receptor signaling complex.
Sci Adv, 7, 2021
7OQH
DownloadVisualize
BU of 7oqh by Molmil
CryoEM structure of the transcription termination factor Rho from Mycobacterium tuberculosis
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
Authors:Saridakis, E, Vishwakarma, R, Lai Kee Him, J, Martin, K, Simon, I, Cohen-Gonsaud, M, Coste, F, Bron, P, Margeat, E, Boudvillain, M.
Deposit date:2021-06-03
Release date:2022-02-09
Last modified:2022-09-14
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Cryo-EM structure of transcription termination factor Rho from Mycobacterium tuberculosis reveals bicyclomycin resistance mechanism.
Commun Biol, 5, 2022
7Z8Q
DownloadVisualize
BU of 7z8q by Molmil
Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase core
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Brodolin, K.
Deposit date:2022-03-18
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Structural basis of the mycobacterial stress-response RNA polymerase auto-inhibition via oligomerization
Nat Commun, 14, 2023
4DQW
DownloadVisualize
BU of 4dqw by Molmil
Crystal Structure Analysis of PA3770
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Inosine-5'-monophosphate dehydrogenase, ...
Authors:Labesse, G, Munier-Lehmann, H.
Deposit date:2012-02-16
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:MgATP Regulates Allostery and Fiber Formation in IMPDHs.
Structure, 21, 2013
7BIX
DownloadVisualize
BU of 7bix by Molmil
Crystal structure of UMPK from M. tuberculosis in complex with UDP and UTP (C2 form)
Descriptor: URIDINE 5'-TRIPHOSPHATE, URIDINE-5'-DIPHOSPHATE, Uridylate kinase
Authors:Labesse, G, Walter, P, Haouz, A, Mechaly, A.E, Munier-Lehmann, H.
Deposit date:2021-01-13
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structural basis for the allosteric inhibition of UMP kinase from Gram-positive bacteria, a promising antibacterial target.
Febs J., 289, 2022
7BL7
DownloadVisualize
BU of 7bl7 by Molmil
Crystal structure of UMPK from M. tuberculosis in complex with UDP and UTP (P21212 form)
Descriptor: URIDINE 5'-TRIPHOSPHATE, URIDINE-5'-DIPHOSPHATE, Uridylate kinase
Authors:Walter, P, Labesse, G, Haouz, A, Mechaly, A.E, Munier-Lehmann, H.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:Structural basis for the allosteric inhibition of UMP kinase from Gram-positive bacteria, a promising antibacterial target.
Febs J., 289, 2022
3EJC
DownloadVisualize
BU of 3ejc by Molmil
Full length Receptor Binding Protein from Lactococcal phage TP901-1
Descriptor: Baseplate protein (BPP)
Authors:Spinelli, S, Lichiere, J, Blangy, S, Sciara, G, Cambillau, C, Campanacci, V.
Deposit date:2008-09-18
Release date:2009-10-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and molecular assignment of lactococcal phage TP901-1 baseplate.
J.Biol.Chem., 285, 2010
3F6N
DownloadVisualize
BU of 3f6n by Molmil
Crystal structure of the virion-associated protein P3 from Caulimovirus
Descriptor: Virion-associated protein
Authors:Hoh, F, Uzest, M, Blanc, S, Dumas, C.
Deposit date:2008-11-06
Release date:2009-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insights into the molecular mechanisms of cauliflower mosaic virus transmission by its insect vector.
J.Virol., 84, 2010

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon