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1MB4
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BU of 1mb4 by Molmil
Crystal structure of aspartate semialdehyde dehydrogenase from vibrio cholerae with NADP and S-methyl-l-cysteine sulfoxide
Descriptor: Aspartate-Semialdehyde Dehydrogenase, CYSTEINE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Blanco, J, Moore, R.A, Kabaleeswaran, V, Viola, R.E.
Deposit date:2002-08-02
Release date:2003-01-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:A structural Basis for the Mechanism of Aspartate-beta-semialdehyde Dehydrogenase from Vibrio Cholerae
Protein Sci., 12, 2003
1MC4
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Crystal Structure of Aspartate-Semialdehyde dehydrogenase from Vibrio Cholerae El Tor
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Kabaleeswaran, V, Viola, R.E.
Deposit date:2002-08-05
Release date:2003-03-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:A Structural Basis for the Mechanism of Aspartate-beta-semialdehyde Dehydrogenase from Vibrio Cholerae
Protein Sci., 12, 2003
1NX6
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Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae as a Tetrahedral Hemithiocetal Reaction intermediate with Phosphate at 2.15 A
Descriptor: Aspartate-Semialdehyde Dehydrogenase, PHOSPHATE ION
Authors:Blanco, J, Moore, R.A, Viola, R.E.
Deposit date:2003-02-09
Release date:2003-11-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Capture of an Intermediate in the Catalytic Cycle of L-Aspartate-beta-Semialdehyde Dehydrogenase
Proc.Natl.Acad.Sci.USA, 100, 2003
1NWC
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Crystal Structure of Aspartate-Semialdehyde Dehydrogenase from Haemophilus influenzae
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Viola, R.E.
Deposit date:2003-02-05
Release date:2003-11-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Capture of an Intermediate in the Catalytic Cycle of L-Aspartate-beta-Semialdehyde Dehydrogenase
Proc.Natl.Acad.Sci.USA, 100, 2003
1NWH
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Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae as a Tetrahedral Hemithioacetal Reaction Intermediate at 2.0 A
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Viola, R.E.
Deposit date:2003-02-06
Release date:2003-11-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Capture of an Intermediate in the Catalytic Cycle of L-Aspartate-beta-Semialdehyde Dehydrogenase
Proc.Natl.Acad.Sci.USA, 100, 2003
1OZA
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BU of 1oza by Molmil
Crystal Structure of the R103L Mutant of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Viola, R.E.
Deposit date:2003-04-08
Release date:2004-06-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
1PR3
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BU of 1pr3 by Molmil
Crystal Structure of the R103K Mutant of Aspartate Semialdehyde dehydrogenase from Haemophilus influenzae
Descriptor: Aspartate semialdehyde dehydrogenase, PHOSPHATE ION
Authors:Blanco, J, Moore, R.A, Faehnle, C.R, Coe, D.M, Viola, R.E.
Deposit date:2003-06-19
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
1PQU
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BU of 1pqu by Molmil
Crystal Structure of the H277N Mutant of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae Bound with NADP, S-methyl cysteine sulfoxide and cacodylate
Descriptor: Aspartate-semialdehyde dehydrogenase, CACODYLATE ION, CYSTEINE, ...
Authors:Blanco, J, Moore, R.A, Viola, R.E.
Deposit date:2003-06-19
Release date:2004-08-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
1PU2
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Crystal Structure of the K246R Mutant of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Faehnle, C.R, Coe, D.M, Viola, R.E.
Deposit date:2003-06-23
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
1Q2X
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Crystal Structure of the E243D Mutant of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae bound with substrate aspartate semialdehyde
Descriptor: Aspartate-semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Faehnle, C.R, Coe, D.M, Viola, R.E.
Deposit date:2003-07-26
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
1PQP
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Crystal Structure of the C136S Mutant of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae Bound with Aspartate Semialdehyde and Phosphate
Descriptor: Aspartate-semialdehyde dehydrogenase, L-HOMOSERINE, PHOSPHATE ION
Authors:Blanco, J, Moore, R.A, Faehnle, C.R, Viola, R.E.
Deposit date:2003-06-18
Release date:2004-08-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
1PS8
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Crystal Structure of the R270K Mutant of Aspartate Semialdehyde dehydrogenase from Haemophilus influenzae
Descriptor: Aspartate semialdehyde dehydrogenase
Authors:Blanco, J, Moore, R.A, Faehnle, C.R, Coe, D.M, Viola, R.E.
Deposit date:2003-06-20
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
8C89
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BU of 8c89 by Molmil
SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab)
Descriptor: 17T2 Fab heavy chain, 17T2 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Modrego, A, Carlero, D, Bueno-Carrasco, M.T, Santiago, C, Carolis, C, Arranz, R, Blanco, J, Magri, G.
Deposit date:2023-01-19
Release date:2024-01-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.41 Å)
Cite:A monoclonal antibody targeting a large surface of the receptor binding motif shows pan-neutralizing SARS-CoV-2 activity.
Nat Commun, 15, 2024
6W7N
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BU of 6w7n by Molmil
30S-Inactive-low-Mg2+ Class A
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S12, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-19
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W7W
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BU of 6w7w by Molmil
30S-Inactive-low-Mg2+ Class B
Descriptor: 16S rRNA, 30S ribosomal protein S12, 30S ribosomal protein S15, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-19
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W6K
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30S-Activated-high-Mg2+
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-17
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W77
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BU of 6w77 by Molmil
30S-Inactivated-high-Mg2+ Class A
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-18
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6W7M
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BU of 6w7m by Molmil
30S-Inactive-high-Mg2+ + carbon layer
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Jahagirdar, D, Jha, V, Basu, B, Gomez-Blanco, J, Vargas, J, Ortega, J.
Deposit date:2020-03-19
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Alternative conformations and motions adopted by 30S ribosomal subunits visualized by cryo-electron microscopy.
Rna, 26, 2020
6QI5
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BU of 6qi5 by Molmil
Near Atomic Structure of an Atadenovirus Shows a possible gene duplication event and Intergenera Variations in Cementing Proteins
Descriptor: Hexon protein, PIIIa, Penton protein, ...
Authors:Condezo, G.N, Marabini, R, Gomez-Blanco, J, SanMartin, C.
Deposit date:2019-01-17
Release date:2020-08-05
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Near-atomic structure of an atadenovirus reveals a conserved capsid-binding motif and intergenera variations in cementing proteins.
Sci Adv, 7, 2021
5ND1
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BU of 5nd1 by Molmil
Viral evolution results in multiple, surface-allocated enzymatic activities in a fungal double-stranded RNA virus
Descriptor: Capsid protein
Authors:Mata, C.P, Luque, D, Gomez Blanco, J, Rodriguez, J.M, Suzuki, N, Ghabrial, S.A, Carrascosa, J.L, Trus, B.L, Caston, J.R.
Deposit date:2017-03-07
Release date:2017-11-29
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Acquisition of functions on the outer capsid surface during evolution of double-stranded RNA fungal viruses.
PLoS Pathog., 13, 2017
3ZUE
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BU of 3zue by Molmil
Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein
Descriptor: CAPSID STRUCTURAL PROTEIN VP60
Authors:Luque, D, Gonzalez, J.M, Gomez-Blanco, J, Marabini, R, Chichon, J, Mena, I, Angulo, I, Carrascosa, J.L, Verdaguer, N, Trus, B.L, Barcena, J, Caston, J.R.
Deposit date:2011-07-18
Release date:2012-05-23
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (10.3 Å)
Cite:Epitope Insertion at the N-Terminal Molecular Switch of the Rabbit Hemorrhagic Disease Virus T=3 Capsid Protein Leads to Larger T=4 Capsids.
J.Virol., 86, 2012
3J3I
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BU of 3j3i by Molmil
Penicillium chrysogenum virus (PcV) capsid structure
Descriptor: Capsid protein
Authors:Luque, D, Gomez-Blanco, J, Garriga, D, Brilot, A, Gonzalez, J.M, Havens, W.H, Carrascosa, J.L, Trus, B.L, Verdaguer, N, Grigorieff, N, Ghabrial, S.A, Caston, J.R.
Deposit date:2013-03-08
Release date:2014-05-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM near-atomic structure of a dsRNA fungal virus shows ancient structural motifs preserved in the dsRNA viral lineage.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ZIQ
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BU of 4ziq by Molmil
Crystal structure of trypsin activated alpha-2-macroglobulin from Escherichia coli.
Descriptor: CHLORIDE ION, GLYCEROL, Uncharacterized lipoprotein YfhM
Authors:Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
Deposit date:2015-04-28
Release date:2015-06-10
Last modified:2015-07-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZJG
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Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning domains MG0-NIE-MG1.
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
Deposit date:2015-04-29
Release date:2015-06-10
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZIU
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Crystal structure of native alpha-2-macroglobulin from Escherichia coli spanning the residues from domain MG7 to the C-terminus.
Descriptor: GLYCEROL, NICKEL (II) ION, Uncharacterized lipoprotein YfhM
Authors:Garcia-Ferrer, I, Arede, P, Gomez-Blanco, J, Luque, D, Duquerroy, S, Caston, J.R, Goulas, T, Gomis-Ruth, X.F.
Deposit date:2015-04-28
Release date:2015-06-10
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional insights into Escherichia coli alpha 2-macroglobulin endopeptidase snap-trap inhibition.
Proc.Natl.Acad.Sci.USA, 112, 2015

 

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