Author results

5ZCR
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DSM5389 GLYCOSYLTREHALOSE SYNTHASE
Descriptor:Maltooligosyl trehalose synthase, MAGNESIUM ION, GLYCEROL
Authors:Tamada, T., Okazaki, N.
Deposit date:2018-02-20
Release date:2018-11-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of glycosyltrehalose synthase from Sulfolobus shibatae DSM5389
Acta Crystallogr F Struct Biol Commun, 74, 2018
4YOL
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HUMAN FIBROBLAST GROWTH FACTOR-1 C16S/A66C/C117A/P134A
Descriptor:Fibroblast growth factor 1, CITRATE ANION, IMIDAZOLE
Authors:Xia, X., Blaber, M.
Deposit date:2015-03-11
Release date:2016-03-16
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Engineering a Cysteine-Free Form of Human Fibroblast Growth Factor-1 for "Second Generation" Therapeutic Application.
J.Pharm.Sci., 105, 2016
4REL
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CRYSTAL STRUCTURE OF UDP-GLUCOSE: ANTHOCYANIDIN 3-O-GLUCOSYLTRANSFERASE IN COMPLEX WITH KAEMPFEROL
Descriptor:UDP-glucose:anthocyanidin 3-O-glucosyltransferase, 3,5,7-TRIHYDROXY-2-(4-HYDROXYPHENYL)-4H-CHROMEN-4-ONE, GLYCEROL, ...
Authors:Hiromoto, T., Honjo, E., Tamada, T., Kuroki, R.
Deposit date:2014-09-23
Release date:2015-01-21
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (1.754 Å)
Cite:Structural basis for acceptor-substrate recognition of UDP-glucose: anthocyanidin 3-O-glucosyltransferase from Clitoria ternatea
Protein Sci., 24, 2015
4REM
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CRYSTAL STRUCTURE OF UDP-GLUCOSE: ANTHOCYANIDIN 3-O-GLUCOSYLTRANSFERASE IN COMPLEX WITH DELPHINIDIN
Descriptor:UDP-glucose:anthocyanidin 3-O-glucosyltransferase, 3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)chromenium, GLYCEROL
Authors:Hiromoto, T., Honjo, E., Tamada, T., Kuroki, R.
Deposit date:2014-09-23
Release date:2015-01-21
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for acceptor-substrate recognition of UDP-glucose: anthocyanidin 3-O-glucosyltransferase from Clitoria ternatea
Protein Sci., 24, 2015
4REN
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CRYSTAL STRUCTURE OF UDP-GLUCOSE: ANTHOCYANIDIN 3-O-GLUCOSYLTRANSFERASE IN COMPLEX WITH PETUNIDIN
Descriptor:UDP-glucose:anthocyanidin 3-O-glucosyltransferase, 2-(3,4-dihydroxy-5-methoxyphenyl)-3,5,7-trihydroxychromenium, GLYCEROL
Authors:Hiromoto, T., Honjo, E., Tamada, T., Kuroki, R.
Deposit date:2014-09-23
Release date:2015-01-21
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:Structural basis for acceptor-substrate recognition of UDP-glucose: anthocyanidin 3-O-glucosyltransferase from Clitoria ternatea
Protein Sci., 24, 2015
4WHM
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CRYSTAL STRUCTURE OF UDP-GLUCOSE: ANTHOCYANIDIN 3-O-GLUCOSYLTRANSFERASE IN COMPLEX WITH UDP
Descriptor:UDP-glucose:anthocyanidin 3-O-glucosyltransferase, URIDINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Hiromoto, T., Honjo, E., Tamada, T., Kuroki, R.
Deposit date:2014-09-23
Release date:2015-01-21
Last modified:2015-03-11
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural basis for acceptor-substrate recognition of UDP-glucose: anthocyanidin 3-O-glucosyltransferase from Clitoria ternatea
Protein Sci., 24, 2015
4QO3
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CRYSTAL STRUCTURE OF C16S/N18S/K12V/C117V/P134V MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR
Descriptor:Fibroblast growth factor 1, CITRATE ANION, IMIDAZOLE
Authors:Blaber, M., Xia, X.
Deposit date:2014-06-19
Release date:2015-05-06
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Thermodynamics of Cysteine Substitution Suggest Unique Structural Role for Cysteine in Proteins
To be Published
4QKR
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CRYSTAL STRUCTURE OF 6XTYR/PV2: DE NOVO DESIGNED BETA-TREFOIL ARCHITECTURE WITH SYMMETRIC PRIMARY STRUCTURE (L22Y/L44Y/L64Y/L85Y/L108Y/L132Y, PRIMITIVE VERSION 2)
Descriptor:DE NOVO PROTEIN 6XTYR/PV2, IMIDAZOLE
Authors:Longo, L.M., Blaber, M., Tenorio, C.A.
Deposit date:2014-06-09
Release date:2015-01-14
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.746 Å)
Cite:A single aromatic core mutation converts a designed "primitive" protein from halophile to mesophile folding.
Protein Sci., 24, 2015
4QKS
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CRYSTAL STRUCTURE OF 6XTRP/PV2: DE NOVO DESIGNED BETA-TREFOIL ARCHITECTURE WITH SYMMETRIC PRIMARY STRUCTURE (L22W/L44W/L64W/L85W/L108W/L132W HIS PRIMITIVE VERSION 2)
Descriptor:DE NOVO PROTEIN 6XTRP/PV2, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION
Authors:Longo, L.M., Tenorio, C.A., Blaber, M.
Deposit date:2014-06-09
Release date:2015-01-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A single aromatic core mutation converts a designed "primitive" protein from halophile to mesophile folding.
Protein Sci., 24, 2015
4QC4
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CRYSTAL STRUCTURE OF C117S MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR
Descriptor:Fibroblast growth factor 1, CITRATE ANION, SODIUM ION, ...
Authors:Blaber, M., Xia, X.
Deposit date:2014-05-09
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.491 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
4QBV
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CRYSTAL STRUCTURE OF C117T MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR IN SODIUM CITRATE BUFFER
Descriptor:Fibroblast growth factor 1, CITRATE ANION
Authors:Blaber, M., Xia, X.
Deposit date:2014-05-08
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
4QBC
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CRYSTAL STRUCTURE OF C117T MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR IN SODIUM FORMATE BUFFER
Descriptor:Fibroblast growth factor 1, SULFATE ION, FORMIC ACID
Authors:Blaber, M., Xia, X.
Deposit date:2014-05-07
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.519 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
4QAL
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CRYSTAL STRUCTURE OF C117A MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR
Descriptor:Fibroblast growth factor 1, CITRATE ANION
Authors:Blaber, M., Xia, X.
Deposit date:2014-05-05
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
4Q9G
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CRYSTAL STRUCTURE OF K12V/C16S/C117V/P134V MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR
Descriptor:Fibroblast growth factor 1, FORMIC ACID, PHOSPHATE ION
Authors:Blaber, M., Xia, X.
Deposit date:2014-05-01
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
4Q9P
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CRYSTAL STRUCTURE OF C16T/K12V/C117V/P134V MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR
Descriptor:Fibroblast growth factor 1
Authors:Blaber, M., Xia, X.
Deposit date:2014-05-01
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
4Q91
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CRYSTAL STRUCTURE OF C16A/K12V/C117V/P134V MUTANT OF HUMAN ACIDIC FIBROBLAST GROWTH FACTOR
Descriptor:Fibroblast growth factor 1, FORMIC ACID, PHOSPHATE ION
Authors:Xia, X., Blaber, M.
Deposit date:2014-04-28
Release date:2015-03-11
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Mutation choice to eliminate buried free cysteines in protein therapeutics.
J.Pharm.Sci., 104, 2015
3WS4
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N288Q-N321Q MUTANT BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (CONDITION-2A)
Descriptor:Beta-lactamase, STRONTIUM ION, CHLORIDE ION
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-28
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WS5
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N288Q-N321Q MUTANT BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (CONDITION-2B)
Descriptor:Beta-lactamase, STRONTIUM ION, CHLORIDE ION, ...
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-28
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WRT
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WILD TYPE BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560
Descriptor:Beta-lactamase
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-27
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WRZ
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N288Q-N321Q MUTANT BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (WITHOUT SOAKING)
Descriptor:Beta-lactamase, CALCIUM ION, CHLORIDE ION
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-27
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WS0
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N288Q-N321Q MUTANT BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (CONDITION-1A)
Descriptor:Beta-lactamase, CALCIUM ION, CESIUM ION, ...
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-27
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WS1
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N288Q-N321Q MUTANT BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (CONDITION-1B)
Descriptor:Beta-lactamase, CESIUM ION, CALCIUM ION
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-27
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
3WS2
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N288Q-N321Q MUTANT BETA-LACTAMASE DERIVED FROM CHROMOHALOBACTER SP.560 (CONDITION-1C)
Descriptor:Beta-lactamase, CESIUM ION, CALCIUM ION
Authors:Arai, S., Yonezawa, Y., Okazaki, N., Matsumoto, F., Shimizu, R., Yamada, M., Adachi, M., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
Deposit date:2014-02-27
Release date:2015-03-04
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a highly acidic beta-lactamase from the moderate halophile Chromohalobacter sp. 560 and the discovery of a Cs(+)-selective binding site
Acta Crystallogr.,Sect.D, 71, 2015
4OW4
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BETA-TREFOIL DESIGNED BY FOLDING NUCLEUS SYMMETRIC EXPANSION ("PHIFOIL")
Descriptor:Beta-terfoil designed by folding nucleus symmetric expansion ("Phifoil"), SULFATE ION
Authors:Blaber, M., Longo, L.M.
Deposit date:2014-01-31
Release date:2014-12-17
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Evolution and design of protein structure by folding nucleus symmetric expansion.
Structure, 22, 2014
3WBH
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STRUCTURAL CHARACTERISTICS OF ALKALINE PHOSPHATASE FROM A MODERATELY HALOPHILIC BACTERIA HALOMONAS SP.593
Descriptor:Alkaline phosphatase, MAGNESIUM ION, ZINC ION, ...
Authors:Arai, S., Yonezawa, Y., Ishibashi, M., Matsumoto, F., Tamada, T., Tokunaga, H., Tokunaga, M., Kuroki, R.
Deposit date:2013-05-17
Release date:2014-03-12
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characteristics of alkaline phosphatase from the moderately halophilic bacterium Halomonas sp. 593.
Acta Crystallogr.,Sect.D, 70, 2014