Author results

3IZD
  • Download 3izd
  • View 3izd
Molmil generated image of 3izd
MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF.
Descriptor:rRNA expansion segment ES27L in an "out" conformation
Authors:Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R.
Deposit date:2010-10-13
Release date:2010-12-01
Last modified:2012-05-30
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
4V6I
  • Download 4v6i
  • View 4v6i
Molmil generated image of 4v6i
LOCALIZATION OF THE SMALL SUBUNIT RIBOSOMAL PROTEINS INTO A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME
Descriptor:40S ribosomal protein RACK1 (RACK1), 40S ribosomal protein rpS0 (S2p), 40S ribosomal protein rpS3 (S3p), ...
Authors:Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R.
Deposit date:2010-10-12
Release date:2014-07-09
Last modified:2015-03-25
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
2WW9
  • Download 2ww9
  • View 2ww9
Molmil generated image of 2ww9
CRYO-EM STRUCTURE OF THE ACTIVE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME
Descriptor:SEC SIXTY-ONE PROTEIN HOMOLOG, PROTEIN TRANSPORT PROTEIN SSS1, PROTEIN TRANSPORT PROTEIN SEB2, ...
Authors:Becker, T., Mandon, E., Bhushan, S., Jarasch, A., Armache, J.P., Funes, S., Jossinet, F., Gumbart, J., Mielke, T., Berninghausen, O., Schulten, K., Westhof, E., Gilmore, R., Beckmann, R.
Deposit date:2009-10-22
Release date:2009-12-08
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
2WWA
  • Download 2wwa
  • View 2wwa
Molmil generated image of 2wwa
CRYO-EM STRUCTURE OF IDLE YEAST SSH1 COMPLEX BOUND TO THE YEAST 80S RIBOSOME
Descriptor:SEC SIXTY-ONE PROTEIN HOMOLOG, PROTEIN TRANSPORT PROTEIN SSS1, PROTEIN TRANSPORT PROTEIN SEB2, ...
Authors:Becker, T., Mandon, E., Bhushan, S., Jarasch, A., Armache, J.P., Funes, S., Jossinet, F., Gumbart, J., Mielke, T., Berninghausen, O., Schulten, K., Westhof, E., Gilmore, R., Beckmann, R.
Deposit date:2009-10-22
Release date:2009-12-08
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
2WWB
  • Download 2wwb
  • View 2wwb
Molmil generated image of 2wwb
CRYO-EM STRUCTURE OF THE MAMMALIAN SEC61 COMPLEX BOUND TO THE ACTIVELY TRANSLATING WHEAT GERM 80S RIBOSOME
Descriptor:PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA, ...
Authors:Becker, T., Mandon, E., Bhushan, S., Jarasch, A., Armache, J.P., Funes, S., Jossinet, F., Gumbart, J., Mielke, T., Berninghausen, O., Schulten, K., Westhof, E., Gilmore, R., Beckmann, R.
Deposit date:2009-10-22
Release date:2009-12-08
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (6.48 Å)
Cite:Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
4V7E
  • Download 4v7e
  • View 4v7e
Molmil generated image of 4v7e
MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME
Descriptor:18S ribosomal RNA, P-site tRNA, 5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3', ...
Authors:Barrio-Garcia, C., Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R.
Deposit date:2013-11-22
Release date:2014-07-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Nature, 506, 2014
5TCU
  • Download 5tcu
  • View 5tcu
Molmil generated image of 5tcu
METHICILLIN SENSITIVE STAPHYLOCOCCUS AUREUS 70S RIBOSOME
Descriptor:16S RRNA, 30S ribosomal protein S3, 30S ribosomal protein S4, ...
Authors:Eyal, Z., Ahmed, T., Belousoff, N., Mishra, S., Matzov, D., Bashan, A., Zimmerman, E., Lithgow, T., Bhushan, S., Yonath, A.
Deposit date:2016-09-15
Release date:2017-05-24
Last modified:2017-09-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Basis for Linezolid Binding Site Rearrangement in the Staphylococcus aureus Ribosome.
MBio, 8, 2017
5ZEB
  • Download 5zeb
  • View 5zeb
Molmil generated image of 5zeb
M. SMEGMATIS P/P STATE 70S RIBOSOME STRUCTURE
Descriptor:16S rRNA, 30S ribosomal protein S3, 30S ribosomal protein S5, ...
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-27
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
5ZEP
  • Download 5zep
  • View 5zep
Molmil generated image of 5zep
M. SMEGMATIS HIBERNATING STATE 70S RIBOSOME STRUCTURE
Descriptor:16S rRNA, 30S ribosomal protein S3, 30S ribosomal protein S5, ...
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-27
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
5ZET
  • Download 5zet
  • View 5zet
Molmil generated image of 5zet
M. SMEGMATIS P/P STATE 50S RIBOSOMAL SUBUNIT
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-28
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
5ZEU
  • Download 5zeu
  • View 5zeu
Molmil generated image of 5zeu
M. SMEGMATIS P/P STATE 30S RIBOSOMAL SUBUNIT
Descriptor:16S rRNA, 30S ribosomal protein S3, 30S ribosomal protein S5, ...
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-28
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
5ZEY
  • Download 5zey
  • View 5zey
Molmil generated image of 5zey
M. SMEGMATIS TRANS-TRANSLATION STATE 70S RIBOSOME
Descriptor:tmRNA, A-tRNAfMet, SsrA-binding protein
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-28
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
5A9Z
  • Download 5a9z
  • View 5a9z
Molmil generated image of 5a9z
COMPLEX OF THERMOUS THERMOPHILUS RIBOSOME BOUND TO BIPA-GDPCP
Descriptor:23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal protein L1, ...
Authors:Kumar, V., Chen, Y., Ahmed, T., Tan, J., Ero, R., Bhushan, S., Gao, Y.-G.
Deposit date:2015-07-23
Release date:2015-10-14
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
5AA0
  • Download 5aa0
  • View 5aa0
Molmil generated image of 5aa0
COMPLEX OF THERMOUS THERMOPHILUS RIBOSOME (A-AND P-SITE TRNA) BOUND TO BIPA-GDPCP
Descriptor:23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal protein L1, ...
Authors:Kumar, V., Chen, Y., Ahmed, T., Tan, J., Ero, R., Bhushan, S., Gao, Y.-G.
Deposit date:2015-07-23
Release date:2015-10-14
Last modified:2018-10-24
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
Proc.Natl.Acad.Sci.USA, 112, 2015
5FSW
  • Download 5fsw
  • View 5fsw
Molmil generated image of 5fsw
RNA DEPENDENT RNA POLYMERASE QDE-1 FROM THIELAVIA TERRESTRIS
Descriptor:RNA DEPENDENT RNA POLYMERASE QDE-1
Authors:Qian, X., Hamid, F.M., El Sahili, A., Darwis, D.A., Wong, Y.H., Bhushan, S., Makeyev, E.V., Lescar, J.
Deposit date:2016-01-08
Release date:2016-03-02
Last modified:2016-05-11
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Functional Evolution in Orthologous Cell-Encoded RNA-Dependent RNA Polymerases
J.Biol.Chem., 291, 2016
5H1S
  • Download 5h1s
  • View 5h1s
Molmil generated image of 5h1s
STRUCTURE OF THE LARGE SUBUNIT OF THE CHLORO-RIBOSOME
Descriptor:23S rRNA, Spinach chloroplast 4.5S rRNA, 5S rRNA, ...
Authors:Ahmed, T., Yin, Z., Bhushan, S.
Deposit date:2016-10-11
Release date:2017-02-01
Last modified:2018-06-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of the large subunit of the spinach chloroplast ribosome.
Sci Rep, 6, 2016
5IMQ
  • Download 5imq
  • View 5imq
Molmil generated image of 5imq
STRUCTURE OF RIBOSOME BOUND TO COFACTOR AT 3.8 ANGSTROM RESOLUTION
Descriptor:50S ribosomal protein L36, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Kumar, V., Ero, R., Jian, G.K., Ahmed, T., Zhan, Y., Bhushan, S., Gao, Y.G.
Deposit date:2016-03-06
Release date:2016-05-18
Last modified:2018-07-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
J.Biol.Chem., 291, 2016
5IMR
  • Download 5imr
  • View 5imr
Molmil generated image of 5imr
STRUCTURE OF RIBOSOME BOUND TO COFACTOR AT 5.7 ANGSTROM RESOLUTION
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Kumar, V., Ero, R., Jian, G.K., Ahmed, T., Zhan, Y., Bhushan, S., Gao, Y.G.
Deposit date:2016-03-06
Release date:2016-05-18
Last modified:2018-07-25
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
J.Biol.Chem., 291, 2016
5X8P
  • Download 5x8p
  • View 5x8p
Molmil generated image of 5x8p
STRUCTURE OF THE 70S CHLOROPLAST RIBOSOME FROM SPINACH
Descriptor:50S ribosomal protein L32, chloroplastic, 50S ribosomal protein L33, ...
Authors:Ahmed, T., Shi, J., Bhushan, S.
Deposit date:2017-03-03
Release date:2017-06-14
Last modified:2018-06-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation
Nucleic Acids Res., 45, 2017
5X8R
  • Download 5x8r
  • View 5x8r
Molmil generated image of 5x8r
STRUCTURE OF THE 30S SMALL SUBUNIT OF CHLOROPLAST RIBOSOME FROM SPINACH
Descriptor:30S ribosomal protein S2, chloroplastic, 30S ribosomal protein S3, ...
Authors:Ahmed, T., Shi, J., Bhushan, S.
Deposit date:2017-03-03
Release date:2017-06-07
Last modified:2018-06-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation
Nucleic Acids Res., 45, 2017
5X8T
  • Download 5x8t
  • View 5x8t
Molmil generated image of 5x8t
STRUCTURE OF THE 50S LARGE SUBUNIT OF CHLOROPLAST RIBOSOME FROM SPINACH
Descriptor:50S ribosomal protein L32, chloroplastic, 50S ribosomal protein L33, ...
Authors:Ahmed, T., Shi, J., Bhushan, S.
Deposit date:2017-03-03
Release date:2017-06-07
Last modified:2018-06-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation
Nucleic Acids Res., 45, 2017
2XL1
  • Download 2xl1
  • View 2xl1
Molmil generated image of 2xl1
STRUCTURAL BASIS OF TRANSLATIONAL STALLING BY HUMAN CYTOMEGALOVIRUS (HCMV) AND FUNGAL ARGININE ATTENUATOR PEPTIDE (AAP)
Descriptor:ARGININE ATTENUATOR PEPTIDE
Authors:Meyer, N.H., Sattler, M.
Deposit date:2010-07-15
Release date:2010-10-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural Basis for Translational Stalling by Human Cytomegalovirus and Fungal Arginine Attenuator Peptide.
Mol.Cell, 40, 2010
4F9N
  • Download 4f9n
  • View 4f9n
Molmil generated image of 4f9n
CRYSTAL STRUCTURE OF THE COMPLEX OF TYPE I RIBOSOME INACTIVATING PROTEIN FROM MOMORDICA BALSAMINA WITH N7-METHYLATED GUANINE AT 2.65 A RESOLUTION
Descriptor:Ribosome inactivating protein, N-ACETYL-D-GLUCOSAMINE, 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one
Authors:Yamini, S., Kushwaha, G.S., Bhushan, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
Deposit date:2012-05-19
Release date:2012-06-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of the complex of type I Ribosome inactivating protein from Momordica balsamina with N7-methylated guanine at 2.65 A resolution
To be Published
4LT4
  • Download 4lt4
  • View 4lt4
Molmil generated image of 4lt4
CRYSTAL STRUCTURE OF ARGININE INHIBITED RIBOSOME INACTIVATING PROTEIN FROM MOMORDICA BALSAMINA AT 1.69 A RESOLUTION
Descriptor:rRNA N-glycosidase, N-ACETYL-D-GLUCOSAMINE, GLYCEROL, ...
Authors:Yamini, S., Pandey, S., Bhushan, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
Deposit date:2013-07-23
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of arginine inhibited Ribosome inactivating protein from Momordica balsamina at 1.69 A resolution
To be Published
2FGE
  • Download 2fge
  • View 2fge
Molmil generated image of 2fge
CRYSTAL STRUCTURE OF PRESEQUENCE PROTEASE PREP FROM ARABIDOPSIS THALIANA
Descriptor:zinc metalloprotease (insulinase family), nonspecific peptide AALTRA, ZINC ION, ...
Authors:Eneqvist, T., Johnson, K.A.
Deposit date:2005-12-21
Release date:2006-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The closed structure of presequence protease PreP forms a unique 10 000 A(3) chamber for proteolysis
Embo J., 25, 2006
<12>