Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4ARD
DownloadVisualize
BU of 4ard by Molmil
Structure of the immature retroviral capsid at 8A resolution by cryo- electron microscopy
Descriptor: CAPSID PROTEIN P27
Authors:Bharat, T.A.M, Davey, N.E, Ulbrich, P, Riches, J.D, Marco, A.D, Rumlova, M, Sachse, C, Ruml, T, Briggs, J.A.G.
Deposit date:2012-04-23
Release date:2012-05-30
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of the Immature Retroviral Capsid at 8A Resolution by Cryo-Electron Microscopy.
Nature, 487, 2012
5AI7
DownloadVisualize
BU of 5ai7 by Molmil
ParM doublet model
Descriptor: PLASMID SEGREGATION PROTEIN PARM
Authors:Bharat, T.A.M, Murshudov, G.N, Sachse, C, Lowe, J.
Deposit date:2015-02-12
Release date:2015-04-22
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY
Cite:Structures of Actin-Like Parm Filaments Show Architecture of Plasmid-Segregating Spindles
Nature, 523, 2015
5AEY
DownloadVisualize
BU of 5aey by Molmil
actin-like ParM protein bound to AMPPNP
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLASMID SEGREGATION PROTEIN PARM
Authors:Bharat, T.A.M, Murshudov, G.N, Sachse, C, Lowe, J.
Deposit date:2015-01-12
Release date:2015-04-22
Last modified:2015-07-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of Actin-Like Parm Filaments Show Architecture of Plasmid-Segregating Spindles.
Nature, 523, 2015
5N8P
DownloadVisualize
BU of 5n8p by Molmil
S-layer protein RsaA from C. crescentus
Descriptor: CALCIUM ION, S-layer protein
Authors:Bharat, T.A.M, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2017-02-24
Release date:2017-04-12
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the hexagonal surface layer on Caulobacter crescentus cells.
Nat Microbiol, 2, 2017
4ARG
DownloadVisualize
BU of 4arg by Molmil
Structure of the immature retroviral capsid at 8A resolution by cryo- electron microscopy
Descriptor: M-PMV DPRO CANC PROTEIN
Authors:Bharat, T.A.M, Davey, N.E, Ulbrich, P, Riches, J.D, Marco, A.D, Rumlova, M, Sachse, C, Ruml, T, Briggs, J.A.G.
Deposit date:2012-04-23
Release date:2012-05-30
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of the Immature Retroviral Capsid at 8A Resolution by Cryo-Electron Microscopy.
Nature, 487, 2012
4BLF
DownloadVisualize
BU of 4blf by Molmil
Variable internal flexibility characterizes the helical capsid formed by Agrobacterium VirE2 protein on single-stranded DNA.
Descriptor: SINGLE-STRAND DNA-BINDING PROTEIN
Authors:Bharat, T.A.M, Zbaida, D, Eisenstein, M, Frankenstein, Z, Mehlman, T, Weiner, L, Sorzano, C.O.S, Barak, Y, Albeck, S, Briggs, J.A.G, Wolf, S.G, Elbaum, M.
Deposit date:2013-05-02
Release date:2013-06-26
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Variable Internal Flexibility Characterizes the Helical Capsid Formed by Agrobacterium Vire2 Protein on Single-Stranded DNA.
Structure, 21, 2013
4COP
DownloadVisualize
BU of 4cop by Molmil
HIV-1 capsid C-terminal domain mutant (Y169S)
Descriptor: CAPSID PROTEIN P24
Authors:Bharat, T.A.M, Castillo-Menendez, L.R, Hagen, W.J.H, Lux, V, Igonet, S, Schorb, M, Schur, F.K.M, Krausslich, H.-G, Briggs, J.A.G.
Deposit date:2014-01-29
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Cryo-Electron Microscopy of Tubular Arrays of HIV-1 Gag Resolves Structures Essential for Immature Virus Assembly.
Proc.Natl.Acad.Sci.USA, 111, 2014
4D1K
DownloadVisualize
BU of 4d1k by Molmil
Cryo-electron microscopy of tubular arrays of HIV-1 Gag resolves structures essential for immature virus assembly.
Descriptor: GAG PROTEIN
Authors:Bharat, T.A.M, Castillo-Menendez, L.R, Hagen, W.J.H, Lux, V, Igonet, S, Schorb, M, Schur, F.K.M, Krauesslich, H.G, Briggs, J.A.G.
Deposit date:2014-05-02
Release date:2014-06-04
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (9.4 Å)
Cite:Cryo-Electron Microscopy of Tubular Arrays of HIV-1 Gag Resolves Structures Essential for Immature Virus Assembly.
Proc.Natl.Acad.Sci.USA, 111, 2014
4COC
DownloadVisualize
BU of 4coc by Molmil
HIV-1 capsid C-terminal domain mutant (Y169L)
Descriptor: CAPSID PROTEIN P24, SULFATE ION
Authors:Bharat, T.A.M, Castillo-Menendez, L.R, Hagen, W.J.H, Lux, V, Igonet, S, Schorb, M, Schur, F.K.M, Krausslich, H.-G, Briggs, J.A.G.
Deposit date:2014-01-28
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Cryo-Electron Microscopy of Tubular Arrays of HIV-1 Gag Resolves Structures Essential for Immature Virus Assembly.
Proc.Natl.Acad.Sci.USA, 111, 2014
6Z7P
DownloadVisualize
BU of 6z7p by Molmil
Composite model of the Caulobacter crescentus S-layer bound to the O-antigen of lipopolysaccharide
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, S-layer protein
Authors:Bharat, T.A.M, von Kugelgen, A.
Deposit date:2020-06-01
Release date:2020-07-15
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Cell, 180, 2020
8Q7Y
DownloadVisualize
BU of 8q7y by Molmil
ESIBD structure of beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Esser, T, Boehning, J, Bharat, T.A.M, Rauschenbach, S.
Deposit date:2023-08-17
Release date:2024-01-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM of soft-landed beta-galactosidase: Gas-phase and native structures are remarkably similar.
Sci Adv, 10, 2024
8AE1
DownloadVisualize
BU of 8ae1 by Molmil
Structure of trimeric SlpA outer membrane protein
Descriptor: CALCIUM ION, S-layer protein SlpA
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2022-07-12
Release date:2022-11-30
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:A multidomain connector links the outer membrane and cell wall in phylogenetically deep-branching bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
6TUP
DownloadVisualize
BU of 6tup by Molmil
Cryo-EM structure of Pf4 bacteriophage coat protein with single-stranded DNA
Descriptor: Coat protein B of bacteriophage Pf1, DNA (5'-D(P*AP*AP*AP*AP*AP*A)-3')
Authors:Tarafder, A.K, von Kugelgen, A, Bharat, T.A.M.
Deposit date:2020-01-08
Release date:2020-02-26
Last modified:2020-03-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Phage liquid crystalline droplets form occlusive sheaths that encapsulate and protect infectious rod-shaped bacteria.
Proc.Natl.Acad.Sci.USA, 117, 2020
4UDV
DownloadVisualize
BU of 4udv by Molmil
Cryo-EM structure of TMV at 3.35 A resolution
Descriptor: 5'-D(*GP*AP*AP)-3', CAPSID PROTEIN
Authors:Fromm, S.A, Bharat, T.A.M, Jakobi, A.J, Hagen, W.J.H, Sachse, C.
Deposit date:2014-12-11
Release date:2014-12-31
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Seeing Tobacco Mosaic Virus Through Direct Electron Detectors.
J.Struct.Biol., 189, 2015
6T72
DownloadVisualize
BU of 6t72 by Molmil
Structure of the RsaA N-terminal domain bound to LPS
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, S-layer protein
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2019-10-21
Release date:2020-01-15
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Cell, 180, 2020
6TUQ
DownloadVisualize
BU of 6tuq by Molmil
Cryo-EM structure of Pf4 bacteriophage coat protein without ssDNA
Descriptor: Coat protein B of bacteriophage Pf1
Authors:Tarafder, A.K, von Kugelgen, A, Bharat, T.A.M.
Deposit date:2020-01-08
Release date:2020-02-26
Last modified:2020-03-11
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Phage liquid crystalline droplets form occlusive sheaths that encapsulate and protect infectious rod-shaped bacteria.
Proc.Natl.Acad.Sci.USA, 117, 2020
7PTT
DownloadVisualize
BU of 7ptt by Molmil
In-situ structure of hexameric S-layer protein
Descriptor: Cell surface glycoprotein
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2021-09-27
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (7.968 Å)
Cite:Complete atomic structure of a native archaeal cell surface.
Cell Rep, 37, 2021
7PTP
DownloadVisualize
BU of 7ptp by Molmil
In-situ structure of pentameric S-layer protein
Descriptor: Cell surface glycoprotein
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2021-09-27
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (11.58 Å)
Cite:Complete atomic structure of a native archaeal cell surface.
Cell Rep, 37, 2021
5O09
DownloadVisualize
BU of 5o09 by Molmil
BtubABC mini microtubule
Descriptor: Bacterial kinesin light chain, GUANOSINE-5'-DIPHOSPHATE, Tubulin, ...
Authors:Deng, X, Bharat, T.A.M, Lowe, J.
Deposit date:2017-05-16
Release date:2017-07-19
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Four-stranded mini microtubules formed by Prosthecobacter BtubAB show dynamic instability.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7PEO
DownloadVisualize
BU of 7peo by Molmil
Structure of the Caulobacter crescentus S-layer protein RsaA N-terminal domain bound to LPS and soaked with Holmium
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, HOLMIUM ATOM, ...
Authors:von Kugelgen, A, Bharat, T.A.M.
Deposit date:2021-08-11
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.37 Å)
Cite:High-resolution mapping of metal ions reveals principles of surface layer assembly in Caulobacter crescentus cells.
Structure, 30, 2022
7PTR
DownloadVisualize
BU of 7ptr by Molmil
Structure of hexameric S-layer protein from Haloferax volcanii archaea
Descriptor: CALCIUM ION, Cell surface glycoprotein, beta-D-glucopyranose
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2021-09-27
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Complete atomic structure of a native archaeal cell surface.
Cell Rep, 37, 2021
7PTU
DownloadVisualize
BU of 7ptu by Molmil
Structure of pentameric S-layer protein from Halofaerax volcanii
Descriptor: Cell surface glycoprotein, beta-D-glucopyranose
Authors:von Kuegelgen, A, Bharat, T.A.M.
Deposit date:2021-09-27
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Complete atomic structure of a native archaeal cell surface.
Cell Rep, 37, 2021
8AUR
DownloadVisualize
BU of 8aur by Molmil
Cryo-EM structure of a TasA fibre
Descriptor: Major biofilm matrix component
Authors:Boehning, J, Bharat, T.A.M.
Deposit date:2022-08-25
Release date:2022-11-30
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Donor-strand exchange drives assembly of the TasA scaffold in Bacillus subtilis biofilms.
Nat Commun, 13, 2022
8CH5
DownloadVisualize
BU of 8ch5 by Molmil
Cryo-EM structure of the fd bacteriophage capsid major coat protein pVIII
Descriptor: Major capsid protein pVIII
Authors:Boehning, J, Bharat, T.A.M.
Deposit date:2023-02-07
Release date:2023-12-20
Last modified:2024-01-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Biophysical basis of filamentous phage tactoid-mediated antibiotic tolerance in P. aeruginosa.
Nat Commun, 14, 2023
8CIO
DownloadVisualize
BU of 8cio by Molmil
Cryo-EM structure of the CupE pilus from Pseudomonas aeruginosa
Descriptor: SCPU domain-containing protein
Authors:Boehning, J, Bharat, T.A.M.
Deposit date:2023-02-10
Release date:2023-03-22
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Architecture of the biofilm-associated archaic Chaperone-Usher pilus CupE from Pseudomonas aeruginosa.
Plos Pathog., 19, 2023

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon