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1YT5
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Crystal structure of NAD kinase from Thermotoga maritima
Descriptor: SULFATE ION, inorganic polyphosphate/ATP-NAD kinase
Authors:Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-09
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a NAD kinase from Thermotoga maritima at 2.3 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
4D8M
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BU of 4d8m by Molmil
Crystal structure of Bacillus thuringiensis Cry5B nematocidal toxin
Descriptor: Pesticidal crystal protein cry5Ba
Authors:Fan, H, Hu, Y, Aroian, R.V, Ghosh, P, Berkeley Structural Genomics Center (BSGC)
Deposit date:2012-01-10
Release date:2012-12-19
Last modified:2013-02-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Glycolipid Binding Properties of the Nematicidal Protein Cry5B.
Biochemistry, 51, 2012
1DUS
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MJ0882-A hypothetical protein from M. jannaschii
Descriptor: MJ0882
Authors:Hung, L, Huang, L, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-01-18
Release date:2000-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based experimental confirmation of biochemical function to a methyltransferase, MJ0882, from hyperthermophile Methanococcus jannaschii
J.STRUCT.FUNCT.GENOM., 2, 2002
1EKE
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BU of 1eke by Molmil
CRYSTAL STRUCTURE OF CLASS II RIBONUCLEASE H (RNASE HII) WITH MES LIGAND
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, RIBONUCLEASE HII
Authors:Lai, L.H, Yokota, H, Hung, L.W, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-03-07
Release date:2000-09-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of archaeal RNase HII: a homologue of human major RNase H
Structure, 8, 2000
1F5S
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CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE FROM METHANOCOCCUS JANNASCHII
Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOSERINE PHOSPHATASE (PSP)
Authors:Wang, W, Kim, R, Jancarik, J, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-06-15
Release date:2001-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of phosphoserine phosphatase from Methanococcus jannaschii, a hyperthermophile, at 1.8 A resolution.
Structure, 9, 2001
1FO5
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SOLUTION STRUCTURE OF REDUCED MJ0307
Descriptor: THIOREDOXIN
Authors:Cave, J.W, Cho, H.S, Batchelder, A.M, Kim, R, Yokota, H, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-08-24
Release date:2001-04-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution nuclear magnetic resonance structure of a protein disulfide oxidoreductase from Methanococcus jannaschii.
Protein Sci., 10, 2001
1FBN
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CRYSTAL STRUCTURE OF A FIBRILLARIN HOMOLOGUE FROM METHANOCOCCUS JANNASCHII, A HYPERTHERMOPHILE, AT 1.6 A
Descriptor: MJ FIBRILLARIN HOMOLOGUE
Authors:Wang, H, Boisvert, D, Kim, K.K, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1999-04-25
Release date:2000-04-26
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolution.
EMBO J., 19, 2000
1G2I
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CRYSTAL STRUCTURE OF A NOVEL INTRACELLULAR PROTEASE FROM PYROCOCCUS HORIKOSHII AT 2 A RESOLUTION
Descriptor: PROTEASE I, SULFATE ION
Authors:Du, X, Choi, I.-G, Kim, R, Jancarik, J, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-10-19
Release date:2000-11-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an intracellular protease from Pyrococcus horikoshii at 2-A resolution.
Proc.Natl.Acad.Sci.USA, 97, 2000
1G8A
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PYROCOCCUS HORIKOSHII FIBRILLARIN PRE-RRNA PROCESSING PROTEIN
Descriptor: FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
Authors:Boisvert, D.C, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-11-16
Release date:2003-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Structural Approach to Gene Function and Structure Quality for Pyrococcus horikoshii Fibrillarin
To be Published
2BA2
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Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae
Descriptor: Hypothetical UPF0134 protein MPN010
Authors:Shin, D.H, Kim, J.-S, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-10-13
Release date:2006-03-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the DUF16 domain of MPN010 from Mycoplasma pneumoniae.
Protein Sci., 15, 2006
2EIF
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Eukaryotic translation initiation factor 5A from Methanococcus jannaschii
Descriptor: PROTEIN (EUKARYOTIC TRANSLATION INITIATION FACTOR 5A)
Authors:Kim, K.K, Hung, L.W, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1998-10-12
Release date:1999-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of eukaryotic translation initiation factor 5A from Methanococcus jannaschii at 1.8 A resolution.
Proc.Natl.Acad.Sci.USA, 95, 1998
3M93
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Complex crystal structure of Ascaris suum eIF4E-3 with m7G cap
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Eukaryotic translation initiation factor 4E-binding protein 1, Translation initiation factor 4E
Authors:Liu, W, Berkeley Structural Genomics Center (BSGC)
Deposit date:2010-03-19
Release date:2011-07-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for nematode eIF4E binding an m2,2,7G-Cap and its implications for translation initiation.
Nucleic Acids Res., 39, 2011
3M94
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Complex crystal structure of Ascaris suum eIF4E-3 with m2,2,7G cap
Descriptor: ACETYL GROUP, Eukaryotic translation initiation factor 4E-binding protein 1, N,N,7-trimethylguanosine 5'-(trihydrogen diphosphate), ...
Authors:Liu, W, Berkeley Structural Genomics Center (BSGC)
Deposit date:2010-03-19
Release date:2011-07-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for nematode eIF4E binding an m2,2,7G-Cap and its implications for translation initiation.
Nucleic Acids Res., 39, 2011
2AHD
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BU of 2ahd by Molmil
The Apo structure of Methanococcus jannaschii phosphodiesterase MJ0936
Descriptor: Phosphodiesterase MJ0936
Authors:Chen, S, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-07-27
Release date:2005-08-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Apo structure of Methanococcus jannaschii phosphodiesterase MJ0936
TO BE PUBLISHED
1JX7
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Crystal structure of ychN protein from E.coli
Descriptor: HYPOTHETICAL PROTEIN YCHN
Authors:Shin, D.H, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-09-05
Release date:2002-09-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a conserved hypothetical protein from Escherichia coli
J.STRUCT.FUNCT.GENOM., 2, 2002
1MJH
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Structure-based assignment of the biochemical function of hypothetical protein MJ0577: A test case of structural genomics
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PROTEIN (ATP-BINDING DOMAIN OF PROTEIN MJ0577)
Authors:Zarembinski, T.I, Hung, L.-W, Mueller-Dieckmann, H.J, Kim, K.-K, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1998-11-04
Release date:1998-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics.
Proc.Natl.Acad.Sci.USA, 95, 1998
3NMD
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BU of 3nmd by Molmil
Crystal structure of the leucine zipper domain of cGMP dependent protein kinase I beta
Descriptor: GLYCEROL, HEXANE-1,6-DIOL, cGMP Dependent PRotein Kinase
Authors:Kim, C, Casteel, D.E, Smith-Nguyen, E.V, Sankaran, B, Berkeley Structural Genomics Center (BSGC)
Deposit date:2010-06-22
Release date:2010-09-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.272 Å)
Cite:A crystal structure of the cyclic GMP-dependent protein kinase I{beta} dimerization/docking domain reveals molecular details of isoform-specific anchoring.
J.Biol.Chem., 285, 2010
3QQN
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The retinal specific CD147 Ig0 domain: from molecular structure to biological activity
Descriptor: Basigin
Authors:Redzic, J.S, Armstrong, G.S, Isern, N.G, Kieft, J.S, Eisenmesser, E.Z, Berkeley Structural Genomics Center (BSGC)
Deposit date:2011-02-15
Release date:2011-05-11
Last modified:2011-08-17
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:The Retinal Specific CD147 Ig0 Domain: From Molecular Structure to Biological Activity.
J.Mol.Biol., 411, 2011
3QR2
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Wild type CD147 Ig0 domain
Descriptor: Basigin
Authors:Redzic, J.S, Armstrong, G.S, Isern, N.G, Kieft, J.S, Eisenmesser, E.Z, Berkeley Structural Genomics Center (BSGC)
Deposit date:2011-02-16
Release date:2011-05-11
Last modified:2011-08-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Retinal Specific CD147 Ig0 Domain: From Molecular Structure to Biological Activity.
J.Mol.Biol., 411, 2011
1TM9
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BU of 1tm9 by Molmil
NMR Structure of gene target number gi3844938 from Mycoplasma genitalium: Berkeley Structural Genomics Center
Descriptor: Hypothetical protein MG354
Authors:Pelton, J.G, Shi, J, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-06-10
Release date:2004-08-10
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR Structure of Gene Target gi3844938 from Mycoplasma genitalium
To be Published
2HQB
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BU of 2hqb by Molmil
Crystal Structure of a Transcriptional Activator of comK gene from Bacillus halodurans
Descriptor: Transcriptional activator of comK gene
Authors:Xu, Q.S, Berkeley Structural Genomics Center (BSGC)
Deposit date:2006-07-18
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a transcriptional activator of comK gene from Bacillus halodurans.
Proteins, 69, 2007
1LQL
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BU of 1lql by Molmil
Crystal structure of OsmC like protein from Mycoplasma pneumoniae
Descriptor: osmotical inducible protein C like family
Authors:Choi, I.-G, Shin, D.H, Brandsen, J, Jancarik, J, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-05-10
Release date:2003-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution
J.STRUCT.FUNCT.GENOM., 4, 2003
1LFP
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BU of 1lfp by Molmil
Crystal Structure of a Conserved Hypothetical Protein Aq1575 from Aquifex Aeolicus
Descriptor: Hypothetical protein AQ_1575
Authors:Shin, D.H, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-04-11
Release date:2002-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus.
Proc.Natl.Acad.Sci.USA, 99, 2002
1NF2
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BU of 1nf2 by Molmil
X-ray crystal structure of TM0651 from Thermotoga maritima
Descriptor: MAGNESIUM ION, SULFATE ION, phosphatase
Authors:Shin, D.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-12-12
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a phosphatase with a unique substrate binding domain from Thermotoga maritima
Protein Sci., 12, 2003
1MGP
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Hypothetical protein TM841 from Thermotoga maritima reveals fatty acid binding function
Descriptor: Hypothetical protein TM841, PALMITIC ACID
Authors:Schulze-Gahmen, U, Pelaschier, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-08-15
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a hypothetical protein, TM841 of Thermotoga maritima, reveals its function as fatty acid binding protein
Proteins, 50, 2003

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