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1K6F
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BU of 1k6f by Molmil
Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3
Descriptor: collagen triple helix
Authors:Berisio, R, Vitagliano, L, Mazzarella, L, Zagari, A.
Deposit date:2001-10-16
Release date:2002-01-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)
Protein Sci., 11, 2002
1G2B
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BU of 1g2b by Molmil
ALPHA-SPECTRIN SRC HOMOLOGY 3 DOMAIN, CIRCULAR PERMUTANT, CUT AT N47-D48
Descriptor: SPECTRIN ALPHA CHAIN, SULFATE ION
Authors:Berisio, R, Viguera, A.R, Serrano, L, Wilmanns, M.
Deposit date:2000-10-18
Release date:2000-11-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Atomic resolution structure of a mutant of the spectrin SH3 domain.
Acta Crystallogr.,Sect.D, 57, 2001
1KF2
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BU of 1kf2 by Molmil
Atomic Resolution Structure of RNase A at pH 5.2
Descriptor: SULFATE ION, pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1KF4
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BU of 1kf4 by Molmil
Atomic Resolution Structure of RNase A at pH 6.3
Descriptor: SULFATE ION, pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1KF7
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BU of 1kf7 by Molmil
Atomic Resolution Structure of RNase A at pH 8.0
Descriptor: pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1KF8
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BU of 1kf8 by Molmil
Atomic resolution structure of RNase A at pH 8.8
Descriptor: pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1KF3
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BU of 1kf3 by Molmil
Atomic Resolution Structure of RNase A at pH 5.9
Descriptor: SULFATE ION, pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1KF5
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BU of 1kf5 by Molmil
Atomic Resolution Structure of RNase A at pH 7.1
Descriptor: pancreatic ribonuclease
Authors:Berisio, R, Sica, F, Lamzin, V.S, Wilson, K.S, Zagari, A, Mazzarella, L.
Deposit date:2001-11-19
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic resolution structures of ribonuclease A at six pH values.
Acta Crystallogr.,Sect.D, 58, 2002
1P9X
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BU of 1p9x by Molmil
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TELITHROMYCIN KETOLIDE ANTIBIOTIC
Descriptor: 23S RIBOSOMAL RNA, TELITHROMYCIN
Authors:Berisio, R, Harms, J, Schluenzen, F, Zarivach, R, Hansen, H.A, Fucini, P, Yonath, A.
Deposit date:2003-05-13
Release date:2003-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into the antibiotic action of telithromycin against resistant mutants
J.Bacteriol., 185, 2003
1OND
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BU of 1ond by Molmil
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L22, 50S ribosomal protein L32, ...
Authors:Berisio, R, Schluenzen, F, Harms, J, Bashan, A, Auerbach, T, Baram, D, Yonath, A.
Deposit date:2003-02-27
Release date:2003-04-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into the role of the ribosomal tunnel in cellular regulation
Nat.Struct.Biol., 10, 2003
1R3M
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BU of 1r3m by Molmil
Crystal structure of the dimeric unswapped form of bovine seminal ribonuclease
Descriptor: PHOSPHATE ION, Ribonuclease, seminal
Authors:Berisio, R, Sica, F, De Lorenzo, C, Di Fiore, A, Piccoli, R, Zagari, A, Mazzarella, L.
Deposit date:2003-10-02
Release date:2003-11-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the dimeric unswapped form of bovine seminal ribonuclease
Febs Lett., 554, 2003
8BKE
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BU of 8bke by Molmil
Crystal structure of the Klebsiella phage KP34p57 capsular depolymerase
Descriptor: Uncharacterized protein 57
Authors:Berisio, R, Squeglia, F.
Deposit date:2022-11-09
Release date:2023-08-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Klebsiella phage KP34gp57 capsular depolymerase structure and function: from a serendipitous finding to the design of active mini-enzymes against K. pneumoniae.
Mbio, 14, 2023
6S0M
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BU of 6s0m by Molmil
Structural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulence
Descriptor: 3'-5' exoribonuclease, MAGNESIUM ION, RNA (5'-R(P*G)-3')
Authors:Berisio, R, Romano, M.
Deposit date:2019-06-17
Release date:2019-08-28
Last modified:2020-05-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and dynamic studies provide insights into specificity and allosteric regulation of ribonuclease as, a key enzyme in mycobacterial virulence.
J.Biomol.Struct.Dyn., 38, 2020
6TKU
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BU of 6tku by Molmil
Crystal structure of a capsule-specific depolymerase produced by Klebsiella phage
Descriptor: depolymerase KP32gp38
Authors:Berisio, R, Squeglia, F.
Deposit date:2019-11-29
Release date:2020-04-22
Last modified:2020-06-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Studies of a Klebsiella Phage Capsule Depolymerase Tailspike: Mechanistic Insights into Capsular Degradation.
Structure, 28, 2020
2Z53
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BU of 2z53 by Molmil
Crystal structure of the S211A mutant of the ribosome inactivating protein PDL4 from P. dioica leaves
Descriptor: 1,2-ETHANEDIOL, Ribosome-inactivating protein PD-L4
Authors:Berisio, R, Ruggiero, A.
Deposit date:2007-06-27
Release date:2008-02-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Atomic resolution (1.1 A) structure of the ribosome-inactivating protein PD-L4 from Phytolacca dioica L. leaves
Proteins, 71, 2008
4Q4G
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BU of 4q4g by Molmil
Structure of the Resuscitation Promoting Factor Interacting protein RipA mutated at C383
Descriptor: Peptidoglycan endopeptidase RipA
Authors:Berisio, R.
Deposit date:2014-04-14
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Mutational and structural study of RipA, a key enzyme in Mycobacterium tuberculosis cell division: evidence for the L-to-D inversion of configuration of the catalytic cysteine.
Acta Crystallogr.,Sect.D, 70, 2014
5EOC
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BU of 5eoc by Molmil
Crystal structure of Fab C2 in complex with a Cyclic variant of Hepatitis C Virus E2 epitope I
Descriptor: ALA-CYS-GLN-LEU-ILE-ASN-THR-ASN-GLY-SER-TRP-HIS-ILE-CYS, Fab fragment (Heavy chain), Fab fragment (Light chain)
Authors:Berisio, R, Ruggiero, A, Sandomenico, A, Patel, A.H, Ruvo, M, Vitagliano, L.
Deposit date:2015-11-10
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Generation and Characterization of Monoclonal Antibodies against a Cyclic Variant of Hepatitis C Virus E2 Epitope 412-422.
J.Virol., 90, 2016
4OKE
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BU of 4oke by Molmil
Structure of RNase AS, a polyadenylate-specific exoribonuclease affecting mycobacterial virulence in vivo
Descriptor: 3'-5' exoribonuclease Rv2179c/MT2234.1, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION
Authors:Berisio, R, Romano, M.
Deposit date:2014-01-22
Release date:2014-05-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo
Structure, 22, 2014
4NSM
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BU of 4nsm by Molmil
crystal structure of the streptococcal collagen-like protein 2 globular domain from invasive M3-type group A Streptococcus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Collagen-like protein SclB, SULFATE ION
Authors:Berisio, R, Squeglia, F, Lukomski, S, Bachert, B.
Deposit date:2013-11-28
Release date:2013-12-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of the Streptococcal Collagen-like Protein 2 Globular Domain from Invasive M3-type Group A Streptococcus Shows Significant Similarity to Immunomodulatory HIV Protein gp41.
J.Biol.Chem., 289, 2014
5LKW
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BU of 5lkw by Molmil
Crystal structure of the peptidoglycan-associated lipoprotein (Pal) from Burkholderia cepacia in complex with DAP
Descriptor: 2,6-DIAMINOPIMELIC ACID, Putative OmpA family lipoprotein
Authors:Romano, M, Ruggiero, A, Berisio, R.
Deposit date:2016-07-25
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Burkholderia cenocepacia peptidoglycan-associated lipoprotein is involved in epithelial cell attachment and elicitation of inflammation.
Cell. Microbiol., 19, 2017
1A3J
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BU of 1a3j by Molmil
X-RAY CRYSTALLOGRAPHIC DETERMINATION OF A COLLAGEN-LIKE PEPTIDE WITH THE REPEATING SEQUENCE (PRO-PRO-GLY)
Descriptor: COLLAGEN-LIKE PEPTIDE
Authors:Kramer, R.Z, Vitagliano, L, Bella, J, Berisio, R, Mazzarella, L, Brodsky, B, Zagari, A, Berman, H.M.
Deposit date:1998-01-22
Release date:1998-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystallographic determination of a collagen-like peptide with the repeating sequence (Pro-Pro-Gly).
J.Mol.Biol., 280, 1998
1A3I
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BU of 1a3i by Molmil
X-RAY CRYSTALLOGRAPHIC DETERMINATION OF A COLLAGEN-LIKE PEPTIDE WITH THE REPEATING SEQUENCE (PRO-PRO-GLY)
Descriptor: ACETIC ACID, COLLAGEN-LIKE PEPTIDE
Authors:Kramer, R.Z, Vitagliano, L, Bella, J, Berisio, R, Mazzarella, L, Brodsky, B, Zagari, A, Berman, H.M.
Deposit date:1998-01-22
Release date:1998-05-06
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:X-ray crystallographic determination of a collagen-like peptide with the repeating sequence (Pro-Pro-Gly).
J.Mol.Biol., 280, 1998
6SVF
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BU of 6svf by Molmil
Crystal structure of the P235GK mutant of ArgBP from T. maritima
Descriptor: ARGININE, Amino acid ABC transporter, periplasmic amino acid-binding protein
Authors:Vitagliano, L, Berisio, R, Esposito, L, Balasco, N, Smaldone, G, Ruggiero, A.
Deposit date:2019-09-18
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The non-swapped monomeric structure of the arginine-binding protein from Thermotoga maritima.
Acta Crystallogr.,Sect.F, 75, 2019
1G9W
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BU of 1g9w by Molmil
STRUCTURAL BASIS OF COLLAGEN STABILIZATION INDUCED BY PROLINE HYDROXYLATION
Descriptor: COLLAGEN-LIKE PEPTIDE
Authors:Vitagliano, L, Berisio, R, Mazzarella, L, Zagari, A.
Deposit date:2000-11-28
Release date:2001-04-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural bases of collagen stabilization induced by proline hydroxylation.
Biopolymers, 58, 2001
4EMN
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BU of 4emn by Molmil
Crystal structure of RpfB catalytic domain in complex with benzamidine
Descriptor: BENZAMIDINE, Probable resuscitation-promoting factor rpfB, SULFATE ION
Authors:Ruggiero, A, Marchant, J, Squeglia, F, Makarov, V, De Simone, A, Berisio, R.
Deposit date:2012-04-12
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Molecular determinants of inactivation of the resuscitation promoting factor B from Mycobacterium tuberculosis.
J.Biomol.Struct.Dyn., 31, 2013

 

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