Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8DFU
DownloadVisualize
BU of 8dfu by Molmil
Cryo-EM structure of conjugation pili from Aeropyrum pernix
Descriptor: (2S)-3-{[(3R,7S,11S,15S)-3,7,11,15,19-pentamethylicosyl]oxy}-2-{[(2R,6S,10S,14R)-2,6,10,14,18-pentamethylnonadecyl]oxy}propyl dihydrogen phosphate, Pilin protein
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-06-22
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery.
Nat Commun, 14, 2023
8DFT
DownloadVisualize
BU of 8dft by Molmil
Cryo-EM structure of conjugative pili from Pyrobaculum calidifontis
Descriptor: Pilin protein, [(2~{S},7~{S},11~{S},15~{S},19~{R},22~{R},26~{S},30~{R},34~{R},38~{S},43~{S},47~{S},51~{S},55~{R},58~{R},62~{S},66~{R},70~{R})-38-(hydroxymethyl)-7,11,15,19,22,26,30,34,43,47,51,55,58,62,66,70-hexadecamethyl-1,4,37,40-tetraoxacyclodoheptacont-2-yl]methanol
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-06-22
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery.
Nat Commun, 14, 2023
8EXH
DownloadVisualize
BU of 8exh by Molmil
Agrobacterium tumefaciens Tpilus
Descriptor: (14S,17R)-20-amino-17-hydroxy-11,17-dioxo-12,16,18-trioxa-17lambda~5~-phosphaicosan-14-yl tetradecanoate, Protein virB2
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-10-25
Release date:2023-03-22
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery
Nat Commun, 14, 2023
7SZZ
DownloadVisualize
BU of 7szz by Molmil
Structure of the smaller diameter PSMalpha3 nanotubes
Descriptor: Phenol-soluble modulin PSM-alpha-3
Authors:Beltran, L.C, Kreutzberger, M.A, Wang, S, Egelman, E.H, Conticello, V.P.
Deposit date:2021-11-29
Release date:2022-05-18
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SZI
DownloadVisualize
BU of 7szi by Molmil
Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae
Descriptor: OmpK36, TraN
Authors:Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H.
Deposit date:2021-11-27
Release date:2022-06-08
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mating pair stabilization mediates bacterial conjugation species specificity.
Nat Microbiol, 7, 2022
6W8X
DownloadVisualize
BU of 6w8x by Molmil
Cryo-EM of the S. solfataricus pilus
Descriptor: pilin
Authors:Wang, F, Baquero, D.P, Su, Z, Beltran, L.C, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2020-03-21
Release date:2020-07-08
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structures of two archaeal type IV pili illuminate evolutionary relationships.
Nat Commun, 11, 2020
6W8U
DownloadVisualize
BU of 6w8u by Molmil
Cryo-EM of the Pyrobaculum arsenaticum pilus
Descriptor: pilin
Authors:Wang, F, Baquero, D.P, Su, Z, Beltran, L.C, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2020-03-21
Release date:2020-07-08
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The structures of two archaeal type IV pili illuminate evolutionary relationships.
Nat Commun, 11, 2020
6WL9
DownloadVisualize
BU of 6wl9 by Molmil
Cryo-EM of Form 2 like peptide filament, Form2a
Descriptor: peptide Form2a
Authors:Wang, F, Beltran, L.C, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-18
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WQ0
DownloadVisualize
BU of 6wq0 by Molmil
Cryo-EM of the S. solfataricus rod-shaped virus, SSRV1
Descriptor: DNA (301-MER), Structural protein
Authors:Wang, F, Baquero, D.P, Beltran, L.C, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2020-04-28
Release date:2020-07-29
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.
Proc.Natl.Acad.Sci.USA, 117, 2020
7T0X
DownloadVisualize
BU of 7t0x by Molmil
Structure of the larger diameter PSMalpha3 nanotube
Descriptor: Phenol-soluble modulin PSM-alpha-3
Authors:Kreutzberger, M.A, Wang, S, Beltran, L.C, Egelman, E.H, Conticello, V.P.
Deposit date:2021-11-30
Release date:2022-05-18
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
6WL7
DownloadVisualize
BU of 6wl7 by Molmil
Cryo-EM of Form 2 like peptide filament, 29-20-2
Descriptor: peptide 29-20-2
Authors:Wang, F, Gnewou, O.M, Modlin, C, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-18
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WKX
DownloadVisualize
BU of 6wkx by Molmil
Cryo-EM of Form 1 related peptide filament, 15-10-3
Descriptor: peptide 15-10-3
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WL1
DownloadVisualize
BU of 6wl1 by Molmil
Cryo-EM of Form 1 related peptide filament, 36-31-3
Descriptor: peptide 36-31-3
Authors:Wang, F, Gnewou, O.M, Modlin, C, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WL8
DownloadVisualize
BU of 6wl8 by Molmil
Cryo-EM of Form 2 peptide filament
Descriptor: Form 2 peptide
Authors:Wang, F, Gnewou, O.M, Xu, C, Su, Z, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-18
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WL0
DownloadVisualize
BU of 6wl0 by Molmil
Cryo-EM of Form 1 related peptide filament, 36-31-3-RD
Descriptor: peptide 36-31-3-RD
Authors:Wang, F, Gnewou, O.M, Su, Z, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WKY
DownloadVisualize
BU of 6wky by Molmil
Cryo-EM of Form 1 related peptide filament, 29-24-3
Descriptor: peptide 29-24-3
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
6WQ2
DownloadVisualize
BU of 6wq2 by Molmil
Cryo-EM of the S. islandicus filamentous virus, SIFV
Descriptor: A-DNA, Structural protein MCP1, Structural protein MCP2
Authors:Wang, F, Baquero, D.P, Su, Z, Zheng, W, Prangishvili, D, Krupovic, M, Egelman, E.H.
Deposit date:2020-04-28
Release date:2020-07-29
Last modified:2021-10-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.
Proc.Natl.Acad.Sci.USA, 117, 2020
7RO4
DownloadVisualize
BU of 7ro4 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 3
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7RO3
DownloadVisualize
BU of 7ro3 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 2
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7RO2
DownloadVisualize
BU of 7ro2 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 1
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7RO5
DownloadVisualize
BU of 7ro5 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 4
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7RO6
DownloadVisualize
BU of 7ro6 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 5
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7ROC
DownloadVisualize
BU of 7roc by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 7
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7ROB
DownloadVisualize
BU of 7rob by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 6
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
7ROE
DownloadVisualize
BU of 7roe by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 9
Descriptor: major capsid protein
Authors:Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
Deposit date:2021-07-30
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon