Search by PDB author

Crystal structure of YTHDF3 disulfide mutant (closed conformation)
Descriptor:	YTH domain-containing family protein 3
Authors:	Bedi, R.K, Li, Y, Caflisch, A.
Deposit date:	2022-11-24
Release date:	2023-12-13
Method:	X-RAY DIFFRACTION (1.2 Å)
Cite:	Crystal structure of YTHDF3 disulfide mutant (closed conformation) To Be Published

8BS5

Crystal structure of YTHDF3 YTH domain open conformation
Descriptor:	DI(HYDROXYETHYL)ETHER, L(+)-TARTARIC ACID, YTH domain-containing family protein 3
Authors:	Bedi, R.K, Caflisch, A.
Deposit date:	2022-11-24
Release date:	2023-12-13
Method:	X-RAY DIFFRACTION (2.49 Å)
Cite:	Crystal structure of YTHDF3 YTH domain open conformation To Be Published

8BS4

Crystal structure of YTHDF1 YTH domain dimer
Descriptor:	ACETATE ION, GLYCEROL, YTH domain-containing family protein 1
Authors:	Bedi, R.K, Caflisch, A.
Deposit date:	2022-11-24
Release date:	2023-12-13
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal structure of YTHDF1 YTH domain dimer To Be Published

8Q33

Crystal structure of YTHDC1 in complex with Compound 15 (ZA_343)
Descriptor:	SULFATE ION, YTH domain-containing protein 1, ~{N}-[2-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]phenyl]-2,2,2-tris(fluoranyl)ethanamide
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.43 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 15 (ZA_343) To Be Published

8Q4R

Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326)
Descriptor:	SULFATE ION, YTH domain-containing protein 1, [4-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]phenyl]methanol
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.43 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326) To Be Published

8Q2W

Crystal structure of YTHDC1 in complex with Compound 8 (CS_01)
Descriptor:	2-chloranyl-9-(cyclohexylmethyl)-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.41 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 8 (CS_01) To Be Published

8Q3A

Crystal structure of YTHDC1 in complex with Compound 22 (ZA_393)
Descriptor:	3-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzamide, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.43 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 22 (ZA_393) To Be Published

8Q4V

Crystal structure of YTHDC1 in complex with Compound 37 (ZA_356)
Descriptor:	2-chloranyl-9-[(3-chlorophenyl)methyl]-~{N}-cyclopropyl-7,8-dihydropurin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.36 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 37 (ZA_356) To Be Published

8Q2V

Crystal structure of YTHDC1 in complex with Compound 7 (ZA_560)
Descriptor:	2-chloranyl-~{N}-methyl-9-[(2~{S})-oxan-2-yl]purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.71 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 7 (ZA_560) To Be Published

8Q2Y

Crystal structure of YTHDC1 in complex with Compound 11 (ZA_572)
Descriptor:	2-[2-chloranyl-6-(methylamino)purin-9-yl]-~{N}-phenyl-ethanamide, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.71 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 11 (ZA_572) To Be Published

8Q2X

Crystal structure of YTHDC1 in complex with Compound 10 (ZA_294)
Descriptor:	3-[2-chloranyl-6-(methylamino)purin-9-yl]benzoic acid, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 10 (ZA_294) To Be Published

8Q3G

Crystal structure of YTHDC1 in complex with Compound 23 (ZA_385)
Descriptor:	3-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]-~{N}-methyl-benzamide, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-04
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.42 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 23 (ZA_385) To Be Published

8Q4W

Crystal structure of YTHDC1 in complex with Compound 40 (CS_3a)
Descriptor:	5-chloranyl-3-[(3-chlorophenyl)methyl]-~{N}-methyl-2~{H}-pyrazolo[4,3-d]pyrimidin-7-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.61 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 40 (CS_3a) To Be Published

8Q4M

Crystal structure of YTHDC1 in complex with Compound 25 (ZA_349)
Descriptor:	2-chloranyl-9-[(3-chlorophenyl)methyl]-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.43 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 25 (ZA_349) To Be Published

8Q4P

Crystal structure of YTHDC1 in complex with Compound 27 (ZA_309)
Descriptor:	2-chloranyl-9-[(3-methoxyphenyl)methyl]-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.43 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 27 (ZA_309) To Be Published

8Q2T

Crystal structure of YTHDC1 in complex with Compound 5 (ZA_236)
Descriptor:	2-chloranyl-~{N}-methyl-9-(phenylmethyl)purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.41 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 5 (ZA_236) To Be Published

8Q2U

Crystal structure of YTHDC1 in complex with Compound 6 (ZA_308)
Descriptor:	2-chloranyl-~{N}-methyl-9-(pyridin-4-ylmethyl)purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.36 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 6 (ZA_308) To Be Published

8Q37

Crystal structure of YTHDC1 in complex with Compound 18 (ZA_312)
Descriptor:	2-chloranyl-9-[(2-methoxyphenyl)methyl]-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.28 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 18 (ZA_312) To Be Published

8Q38

Crystal structure of YTHDC1 in complex with Compound 19 (ZA_347)
Descriptor:	SULFATE ION, YTH domain-containing protein 1, methyl 3-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzoate
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.42 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 19 (ZA_347) To Be Published

8Q4T

Crystal structure of YTHDC1 in complex with Compound 31 (ZA_400)
Descriptor:	SULFATE ION, YTH domain-containing protein 1, ~{N}-[4-chloranyl-2-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]phenyl]methanesulfonamide
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.51 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 31 (ZA_400) To Be Published

8Q39

Crystal structure of YTHDC1 in complex with Compound 21 (ZA_515)
Descriptor:	2-chloranyl-N-methyl-9-[[3-(1H-1,2,3,4-tetrazol-5-yl)phenyl]methyl]purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.42 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 21 (ZA_515) To Be Published

8Q4U

Crystal structure of YTHDC1 in complex with Compound 36 (ZA_540b)
Descriptor:	9-[(3-chlorophenyl)methyl]-2-fluoranyl-~{N}-methyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.37 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 36 (ZA_540b) To Be Published

8Q4Q

Crystal structure of YTHDC1 in complex with Compound 29 (ZA_337)
Descriptor:	4-[[2-chloranyl-6-(methylamino)purin-9-yl]methyl]benzoic acid, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-07
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 29 (ZA_337) To Be Published

8Q2R

Crystal structure of YTHDC1 in complex with Compound 3 (ZA_431)
Descriptor:	5-chloranyl-~{N},3-dimethyl-1~{H}-pyrazolo[4,3-d]pyrimidin-7-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Li, Y, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 3 (ZA_431) To Be Published

8Q2S

Crystal structure of YTHDC1 in complex with Compound 4 (ZA_232)
Descriptor:	2-chloranyl-~{N}-methyl-9-phenyl-purin-6-amine, SULFATE ION, YTH domain-containing protein 1
Authors:	Bedi, R.K, Zalesak, F, Caflisch, A.
Deposit date:	2023-08-03
Release date:	2023-12-06
Method:	X-RAY DIFFRACTION (1.41 Å)
Cite:	Crystal structure of YTHDC1 in complex with Compound 4 (ZA_232) To Be Published

12 3 4 5 6 7 >

Total results:	159
Displayed results:	25
Sorted by:	Hit score (from highest)