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4V7E
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MODEL OF THE SMALL SUBUNIT RNA BASED ON A 5.5 A CRYO-EM MAP OF TRITICUM AESTIVUM TRANSLATING 80S RIBOSOME
Descriptor:18S ribosomal RNA, P-site tRNA, 5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3', ...
Authors:Barrio-Garcia, C., Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R.
Deposit date:2013-11-22
Release date:2014-07-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Nature, 506, 2014
3IZD
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MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME. 3IZD IS A SMALL PART (AN EXPANSION SEGMENT) WHICH IS IN AN ALTERNATIVE CONFORMATION TO WHAT IS IN ALREADY 3IZF.
Descriptor:rRNA expansion segment ES27L in an "out" conformation
Authors:Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R.
Deposit date:2010-10-13
Release date:2010-12-01
Last modified:2012-05-30
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
4V6I
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LOCALIZATION OF THE SMALL SUBUNIT RIBOSOMAL PROTEINS INTO A 6.1 A CRYO-EM MAP OF SACCHAROMYCES CEREVISIAE TRANSLATING 80S RIBOSOME
Descriptor:40S ribosomal protein RACK1 (RACK1), 40S ribosomal protein rpS0 (S2p), 40S ribosomal protein rpS3 (S3p), ...
Authors:Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke, T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R.
Deposit date:2010-10-12
Release date:2014-07-09
Last modified:2015-03-25
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
1TR8
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CRYSTAL STRUCTURE OF ARCHAEAL NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX (AENAC)
Descriptor:conserved protein (MTH177)
Authors:Spreter, T., Pech, M., Beatrix, B.
Deposit date:2004-06-21
Release date:2005-02-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The crystal structure of archaeal nascent polypeptide-associated complex (NAC) reveals a unique fold and the presence of a UBA domain
J.Biol.Chem., 280, 2005
4CG5
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CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE 80S RIBOSOME TRANSLATING A SECRETORY SUBSTRATE
Descriptor:PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA
Authors:Gogala, M., Becker, T., Beatrix, B., Barrio-Garcia, C., Berninghausen, O., Beckmann, R.
Deposit date:2013-11-21
Release date:2014-02-05
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
4CG6
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CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE 80S RIBOSOME TRANSLATING A MEMBRANE-INSERTING SUBSTRATE
Descriptor:PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA, ...
Authors:Gogala, M., Becker, T., Beatrix, B., Barrio-Garcia, C., Berninghausen, O., Beckmann, R.
Deposit date:2013-11-21
Release date:2014-02-05
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
4CG7
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CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE IDLE 80S RIBOSOME
Descriptor:PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1, PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA, TRANSPORT PROTEIN SEC61 SUBUNIT BETA
Authors:Gogala, M., Becker, T., Beatrix, B., Barrio-Garcia, C., Berninghausen, O., Beckmann, R.
Deposit date:2013-11-21
Release date:2014-02-05
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structures of the Sec61 Complex Engaged in Nascent Peptide Translocation or Membrane Insertion.
Nature, 506, 2014
4URD
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CRYO-EM MAP OF TRIGGER FACTOR BOUND TO A TRANSLATING RIBOSOME
Descriptor:TRIGGER FACTOR
Authors:Deeng, J., Chan, K.Y., van der Sluis, E., Bischoff, L., Berninghausen, O., Han, W., Gumbart, J., Schulten, K., Beatrix, B., Beckmann, R.
Deposit date:2014-06-27
Release date:2016-01-13
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Dynamic Behavior of Trigger Factor on the Ribosome.
J.Mol.Biol., 428, 2016
4V6M
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STRUCTURE OF THE RIBOSOME-SECYE COMPLEX IN THE MEMBRANE ENVIRONMENT
Descriptor:16S RIBOSOMAL RNA, mRNA, FtsQ nascent chain, ...
Authors:Frauenfeld, J., Gumbart, J., van der Sluis, E.O., Funes, S., Gartmann, M., Beatrix, B., Mielke, T., Berninghausen, O., Becker, T., Schulten, K., Beckmann, R.
Deposit date:2011-02-08
Release date:2014-07-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Cryo-EM structure of the ribosome-SecYE complex in the membrane environment.
Nat.Struct.Mol.Biol., 18, 2011
6HD5
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CRYO-EM STRUCTURE OF THE RIBOSOME-NATA COMPLEX
Descriptor:N-terminal acetyltransferase A complex subunit NAT1, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-alpha-acetyltransferase NAT5
Authors:Knorr, A.G., Becker, T., Beckmann, R.
Deposit date:2018-08-17
Release date:2018-12-19
Last modified:2019-01-16
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation.
Nat. Struct. Mol. Biol., 26, 2019
6HD7
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CRYO-EM STRUCTURE OF THE RIBOSOME-NATA COMPLEX
Descriptor:Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5S rRNA, ...
Authors:Knorr, A.G., Becker, T., Beckmann, R.
Deposit date:2018-08-17
Release date:2018-12-19
Last modified:2019-01-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation.
Nat. Struct. Mol. Biol., 26, 2019
6Q8Y
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CRYO-EM STRUCTURE OF THE MRNA TRANSLATING AND DEGRADING YEAST 80S RIBOSOME-XRN1 NUCLEASE COMPLEX
Descriptor:18S ribosomal RNA, 60S ribosomal protein L8-A, 60S ribosomal protein L23-A, ...
Authors:Tesina, P., Heckel, E., Cheng, J., Buschauer, R., Kater, L., Berninghausen, O., Becker, T., Beckmann, R.
Deposit date:2018-12-16
Release date:2019-03-13
Last modified:2019-04-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the 80S ribosome-Xrn1 nuclease complex.
Nat.Struct.Mol.Biol., 26, 2019
1B1A
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GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:GLUTAMATE MUTASE
Authors:Hoffmann, B., Konrat, R., Bothe, H., Buckel, W., Kraeutler, B.
Deposit date:1998-11-19
Release date:1999-07-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure and dynamics of the B12-binding subunit of glutamate mutase from Clostridium cochlearium.
Eur.J.Biochem., 263, 1999
1CB7
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GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM RECONSTITUTED WITH METHYL-COBALAMIN
Descriptor:PROTEIN (GLUTAMATE MUTASE), CO-METHYLCOBALAMIN, D(-)-TARTARIC ACID
Authors:Gruber, K., Reitzer, R., Kratky, C.
Deposit date:1999-03-03
Release date:2000-02-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights.
Structure Fold.Des., 7, 1999
1CCW
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STRUCTURE OF THE COENZYME B12 DEPENDENT ENZYME GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM
Descriptor:PROTEIN (GLUTAMATE MUTASE), CO-CYANOCOBALAMIN, D(-)-TARTARIC ACID
Authors:Reitzer, R., Gruber, K., Kratky, C.
Deposit date:1999-03-01
Release date:2000-03-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights
Structure Fold.Des., 7, 1999
1I9C
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GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM: COMPLEX WITH ADENOSYLCOBALAMIN AND SUBSTRATE
Descriptor:GLUTAMATE MUTASE, COBALAMIN, 5'-DEOXYADENOSINE, ...
Authors:Gruber, K., Kratky, C.
Deposit date:2001-03-19
Release date:2002-03-19
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Radical Shuttling in a Protein: Ribose Pseudorotation Controls Alkyl-Radical Transfer in the Coenzyme B(12) Dependent Enzyme Glutamate Mutase
Angew.Chem.Int.Ed.Engl., 40, 2001