Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6GV9
DownloadVisualize
BU of 6gv9 by Molmil
Structure of the type IV pilus from enterohemorrhagic Escherichia coli (EHEC)
Descriptor: Prepilin peptidase-dependent protein D
Authors:Bardiaux, B, Amorim, G.C, Luna-Rico, A, Zheng, W, Guilvout, I, Jollivet, C, Nilges, M, Egelman, E, Francetic, O, Izadi-Pruneyre, N.
Deposit date:2018-06-20
Release date:2019-05-15
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Structure, 27, 2019
6RHY
DownloadVisualize
BU of 6rhy by Molmil
Structure of pore-forming amyloid-beta tetramers
Descriptor: Amyloid beta A4 protein
Authors:Bardiaux, B, Ciudad, S, Carulla, N.
Deposit date:2019-04-23
Release date:2019-09-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A beta (1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage.
Nat Commun, 11, 2020
6GMS
DownloadVisualize
BU of 6gms by Molmil
Solution NMR structure of the major type IV pilin PpdD from enterohemorrhagic Escherichia coli (EHEC)
Descriptor: Prepilin peptidase-dependent protein D
Authors:Amorim, G.C, Bardiaux, B, Luna-Rico, A, Zeng, W, Guilvout, I, Egelman, E, Nilges, M, Francetic, O, Izadi-Pruneyre, N.
Deposit date:2018-05-28
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Structure, 27, 2019
3J07
DownloadVisualize
BU of 3j07 by Molmil
Model of a 24mer alphaB-crystallin multimer
Descriptor: Alpha-crystallin B chain
Authors:Jehle, S, Vollmar, B, Bardiaux, B, Dove, K.K, Rajagopal, P, Gonen, T, Oschkinat, H, Klevit, R.E.
Deposit date:2011-04-27
Release date:2016-01-20
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (20 Å), SOLID-STATE NMR, SOLUTION SCATTERING
Cite:N-terminal domain of {alpha}B-crystallin provides a conformational switch for multimerization and structural heterogeneity.
Proc.Natl.Acad.Sci.USA, 108, 2011
5WDA
DownloadVisualize
BU of 5wda by Molmil
Structure of the PulG pseudopilus
Descriptor: CALCIUM ION, General secretion pathway protein G
Authors:Lopez-Castilla, A, Thomassin, J.L, Bardiaux, B, Zheng, W, Nivaskumar, M, Yu, X, Nilges, M, Egelman, E.H, Izadi-Pruneyre, N, Francetic, O.
Deposit date:2017-07-04
Release date:2017-10-25
Last modified:2020-01-01
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure of the calcium-dependent type 2 secretion pseudopilus.
Nat Microbiol, 2, 2017
6YP5
DownloadVisualize
BU of 6yp5 by Molmil
Solution NMR structure of the oligomerization domain of respiratory syncytial virus phosphoprotein
Descriptor: Phosphoprotein
Authors:Cardone, C, Bontems, F, Bardiaux, B, Sizun, C.
Deposit date:2020-04-15
Release date:2021-04-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Structural and Dynamic Analysis of the Partially Disordered Polymerase-Binding Domain in RSV Phosphoprotein.
Biomolecules, 11, 2021
8A9W
DownloadVisualize
BU of 8a9w by Molmil
Crystal structure of PulL C-ter domain
Descriptor: SULFATE ION, Type II secretion system protein L
Authors:Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
Deposit date:2022-06-29
Release date:2023-01-11
Last modified:2023-04-12
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
8A9X
DownloadVisualize
BU of 8a9x by Molmil
Crystal structure of PulM C-ter domain
Descriptor: Type II secretion system protein M
Authors:Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
Deposit date:2022-06-29
Release date:2023-01-25
Last modified:2023-04-12
Method:X-RAY DIFFRACTION (1.523 Å)
Cite:Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
8PEK
DownloadVisualize
BU of 8pek by Molmil
Structure of the dimeric, periplasmic domain of ExbD
Descriptor: Biopolymer transport protein ExbD
Authors:Zinke, M, Bardiaux, B, Izadi-Pruneyre, N.
Deposit date:2023-06-14
Release date:2023-09-06
Method:SOLUTION NMR
Cite:Ton Motor Conformational Switch and Peptidoglycan Role in Bacterial Nutrient Uptake.
Biorxiv, 2023
6EKA
DownloadVisualize
BU of 6eka by Molmil
Solid-state MAS NMR structure of the HELLF prion amyloid fibrils
Descriptor: Podospora anserina S mat+ genomic DNA chromosome 3, supercontig 2
Authors:Martinez, D, Daskalov, A, Andreas, L, Bardiaux, B, Coustou, V, Stanek, J, Berbon, M, Noubhani, M, Kauffmann, B, Wall, J.S, Pintacuda, G, Saupe, S.J, Habenstein, B, Loquet, A.
Deposit date:2017-09-25
Release date:2018-10-10
Last modified:2023-06-14
Method:SOLID-STATE NMR
Cite:Structural and molecular basis of cross-seeding barriers in amyloids
Proc.Natl.Acad.Sci.USA, 118, 2021
6G81
DownloadVisualize
BU of 6g81 by Molmil
Solution structure of the Ni metallochaperone HypA from Helicobacter pylori
Descriptor: Hydrogenase maturation factor HypA, ZINC ION
Authors:Spronk, C.A.E.M, Zerko, S, Gorka, M, Kozminski, W, Bardiaux, B, Zambelli, B, Musiani, F, Piccioli, M, Hu, H, Maroney, M, Ciurli, S.
Deposit date:2018-04-07
Release date:2018-10-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and dynamics of Helicobacter pylori nickel-chaperone HypA: an integrated approach using NMR spectroscopy, functional assays and computational tools.
J. Biol. Inorg. Chem., 23, 2018
5O2Y
DownloadVisualize
BU of 5o2y by Molmil
NMR structure of the calcium bound form of PulG, major pseudopilin from Klebsiella oxytoca T2SS
Descriptor: CALCIUM ION, General secretion pathway protein G
Authors:Lopez-Castilla, A, Bardiaux, B, Vitorge, B, Thomassin, J.-L, Zheng, W, Yu, X, Egelman, E.H, Nilges, M, Francetic, O, Izadi-Pruneyre, N.
Deposit date:2017-05-23
Release date:2017-10-18
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structure of the calcium-dependent type 2 secretion pseudopilus.
Nat Microbiol, 2, 2017
5LME
DownloadVisualize
BU of 5lme by Molmil
Specific-DNA binding activity of the cross-brace zinc finger motif of the piggyBac transposase
Descriptor: ZINC ION, piggyBac transposase
Authors:Morellet, N, Taylor, J.A, Wieninger, S, Moriau, S, Li, X, Lescop, E, Mathy, N, Bischerour, J, Betermier, M, Bardiaux, B, Nilges, M, Craig, N.L, Hickman, A.B, Dyda, F, Guittet, E.
Deposit date:2016-07-30
Release date:2017-12-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Sequence-specific DNA binding activity of the cross-brace zinc finger motif of the piggyBac transposase.
Nucleic Acids Res., 46, 2018
5MWV
DownloadVisualize
BU of 5mwv by Molmil
Solid-state NMR Structure of outer membrane protein G in lipid bilayers
Descriptor: Outer membrane protein G
Authors:Retel, J.S, Nieuwkoop, A.J, Hiller, M, Higman, V.A, Barbet-Massin, E, Stanek, J, Andreas, L.B, Franks, W.T, van Rossum, B.-J, Vinothkumar, K.R, Handel, L, de Palma, G.G, Bardiaux, B, Pintacuda, G, Emsley, L, Kuelbrandt, W, Oschkinat, H.
Deposit date:2017-01-20
Release date:2017-12-27
Last modified:2019-08-21
Method:SOLID-STATE NMR
Cite:Structure of outer membrane protein G in lipid bilayers.
Nat Commun, 8, 2017
7ZBQ
DownloadVisualize
BU of 7zbq by Molmil
Structure of the ADP-ribosyltransferase TccC3HVR from Photorhabdus Luminescens
Descriptor: TccC3
Authors:Lindemann, F, Belyy, A, Friedrich, D, Schmieder, P, Bardiaux, B, Roderer, D, Funk, J, Protze, J, Bieling, P, Oschkinat, H, Raunser, S.
Deposit date:2022-03-24
Release date:2022-06-29
Last modified:2022-08-03
Method:SOLUTION NMR
Cite:Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin.
Nat Commun, 13, 2022
7ZE0
DownloadVisualize
BU of 7ze0 by Molmil
Solution structure of the PulM C-terminal domain from Klebsiella oxytoca
Descriptor: Type II secretion system protein M
Authors:Lopez-Castilla, A, Bardiaux, B, Nilges, M, Francetic, O, Izadi-Pruneyre, N.
Deposit date:2022-03-30
Release date:2023-01-18
Last modified:2023-02-15
Method:SOLUTION NMR
Cite:Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
8AB1
DownloadVisualize
BU of 8ab1 by Molmil
Crystal structure of the PulL-PulM C-terminal domain heterocomplex
Descriptor: Type II secretion system protein L, Type II secretion system protein M
Authors:Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-02-15
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
2MWG
DownloadVisualize
BU of 2mwg by Molmil
Full-Length Solution Structure Of YtvA, a LOV-Photoreceptor Protein and Regulator of Bacterial Stress Response
Descriptor: Blue-light photoreceptor, FLAVIN MONONUCLEOTIDE
Authors:Jurk, M, Bardiaux, B, Schmieder, P.
Deposit date:2014-11-07
Release date:2016-05-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of YtvA from Bacillus subtilis Provides Insight into Activation Mechanism and Regulation of Bacterial Stress Response.
To be Published
2RLZ
DownloadVisualize
BU of 2rlz by Molmil
Solid-State MAS NMR structure of the dimer Crh
Descriptor: HPr-like protein crh
Authors:Loquet, A, Bardiaux, B, Gardiennet, C, Blanchet, C, Baldus, M, Nilges, M, Malliavin, T, Bockmann, A.
Deposit date:2007-09-04
Release date:2008-06-17
Last modified:2022-03-16
Method:SOLID-STATE NMR
Cite:3D structure determination of the Crh protein from highly ambiguous solid-state NMR restraints.
J.Am.Chem.Soc., 130, 2008
2KLR
DownloadVisualize
BU of 2klr by Molmil
Solid-state NMR structure of the alpha-crystallin domain in alphaB-crystallin oligomers
Descriptor: Alpha-crystallin B chain
Authors:Jehle, S, Rajagopal, P, Markovic, S, Bardiaux, B, Kuehne, R, Higman, V.A, Klevit, R.E, van Rossum, B, Oschkinat, H.
Deposit date:2009-07-08
Release date:2010-07-07
Last modified:2011-07-13
Method:SOLID-STATE NMR
Cite:Solid-state NMR and SAXS studies provide a structural basis for the activation of alphaB-crystallin oligomers.
Nat.Struct.Mol.Biol., 17, 2010
2LME
DownloadVisualize
BU of 2lme by Molmil
Solid-state NMR structure of the membrane anchor domain of the trimeric autotransporter YadA
Descriptor: Adhesin yadA
Authors:Shahid, S.A, Bardiaux, B, Franks, W.T, Habeck, M, Linke, D, van Rossum, B.
Deposit date:2011-11-30
Release date:2012-11-07
Last modified:2023-06-14
Method:SOLID-STATE NMR
Cite:Membrane-protein structure determination by solid-state NMR spectroscopy of microcrystals.
Nat.Methods, 9, 2012
2KUB
DownloadVisualize
BU of 2kub by Molmil
Solution structure of the alpha subdomain of the major non-repeat unit of Fap1 fimbriae of Streptococcus parasanguis
Descriptor: Fimbriae-associated protein Fap1
Authors:Ramboarina, S, Garnett, J.A, Bodey, A, Simpson, P, Bardiaux, B, Nilges, M, Matthews, S.
Deposit date:2010-02-17
Release date:2010-07-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structural insights into serine-rich fimbriae from gram-positive bacteria.
J.Biol.Chem., 2010
2MS7
DownloadVisualize
BU of 2ms7 by Molmil
High-resolution solid-state NMR structure of the helical signal transduction filament MAVS CARD
Descriptor: Mitochondrial antiviral-signaling protein
Authors:He, L, Bardiaux, B, Spehr, J, Luehrs, T, Ritter, C.
Deposit date:2014-07-25
Release date:2015-09-02
Last modified:2016-02-03
Method:SOLID-STATE NMR
Cite:Structure determination of helical filaments by solid-state NMR spectroscopy.
Proc.Natl.Acad.Sci.USA, 113, 2016
2X12
DownloadVisualize
BU of 2x12 by Molmil
pH-induced modulation of Streptococcus parasanguinis adhesion by Fap1 fimbriae
Descriptor: FIMBRIAE-ASSOCIATED PROTEIN FAP1
Authors:Ramboarina, S, Murray, J.W, Garnett, J, Matthews, S.
Deposit date:2009-12-21
Release date:2010-07-07
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Insights Into Serine-Rich Fimbriae from Gram-Positive Bacteria.
J.Biol.Chem., 285, 2010
8P9R
DownloadVisualize
BU of 8p9r by Molmil
Structure of the periplasmic domain of ExbD from E. coli in complex with TonB
Descriptor: Biopolymer transport protein ExbD, Protein TonB
Authors:Zinke, M, Mechaly, A, Lejeune, M, Haouz, A, Izadi-Pruneyre, N.
Deposit date:2023-06-06
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Ton Motor Conformational Switch and Peptidoglycan Role in Bacterial Nutrient Uptake.
Biorxiv, 2023

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon