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6RM3
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BU of 6rm3 by Molmil
Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
Descriptor: 16S rRNA, 23S rRNA, 5S rRNA, ...
Authors:Barandun, J, Hunziker, M, Vossbrinck, C.R, Klinge, S.
Deposit date:2019-05-05
Release date:2019-07-10
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome.
Nat Microbiol, 4, 2019
5WLC
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BU of 5wlc by Molmil
The complete structure of the small subunit processome
Descriptor: 18S pre-rRNA, 5' ETS, Bms1, ...
Authors:Barandun, J, Chaker-Margot, M, Hunziker, M, Klinge, S.
Deposit date:2017-07-26
Release date:2017-09-27
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The complete structure of the small-subunit processome.
Nat. Struct. Mol. Biol., 24, 2017
4BJR
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BU of 4bjr by Molmil
Crystal structure of the complex between Prokaryotic Ubiquitin-like Protein Pup and its Ligase PafA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PUP--PROTEIN LIGASE, ...
Authors:Barandun, J, Delley, C.L, Ban, N, Weber-Ban, E.
Deposit date:2013-04-19
Release date:2013-05-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Complex between Prokaryotic Ubiquitin-Like Protein Pup and its Ligase Pafa.
J.Am.Chem.Soc., 135, 2013
2Y1L
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BU of 2y1l by Molmil
Caspase-8 in Complex with DARPin-8.4
Descriptor: 1,2-ETHANEDIOL, AC-IETD-CHO, CASPASE-8, ...
Authors:Barandun, J, Schroeder, T, Mittl, P.R.E, Grutter, M.G.
Deposit date:2010-12-08
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Caspase-8 in Complex with Darpin-8.4
To be Published
2Y0B
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BU of 2y0b by Molmil
Caspase-3 in Complex with an Inhibitory DARPin-3.4_S76R
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CASPASE-3, ...
Authors:Barandun, J, Schroeder, T, Mittl, P, Grutter, M.G.
Deposit date:2010-12-01
Release date:2011-12-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Specific Inhibition of Caspase-3 by a Competitive Darpin: Molecular Mimicry between Native and Designed Inhibitors.
Structure, 21, 2013
2XZD
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BU of 2xzd by Molmil
Caspase-3 in Complex with an Inhibitory DARPin-3.4
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CASPASE-3, ...
Authors:Barandun, J, Schroeder, T, Mittl, P, Grutter, M.G.
Deposit date:2010-11-24
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Specific Inhibition of Caspase-3 by a Competitive Darpin: Molecular Mimicry between Native and Designed Inhibitors.
Structure, 21, 2013
2XZT
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BU of 2xzt by Molmil
Caspase-3 in Complex with DARPin-3.4_I78S
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CASPASE-3, DARPIN-3.4_I78S
Authors:Barandun, J, Schroeder, T, Mittl, P, Grutter, M.G.
Deposit date:2010-11-29
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Caspase-3 in Complex with Darpin-3.4_I78S
To be Published
8ADN
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BU of 8adn by Molmil
Vairimorpha necatrix 20S proteasome from spores
Descriptor: Proteasome Inhibitor 31-Like, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
Authors:Jespersen, N, Ehrenbolger, K, Winiger, R, Svedberg, D, Vossbrinck, C.R, Barandun, J.
Deposit date:2022-07-08
Release date:2022-11-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Structure of the reduced microsporidian proteasome bound by PI31-like peptides in dormant spores.
Nat Commun, 13, 2022
7OCY
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BU of 7ocy by Molmil
Enterococcus faecalis EfrCD in complex with a nanobody
Descriptor: ABC transporter ATP-binding protein, Nanobody
Authors:Ehrenbolger, K, Hutter, C.A.J, Meier, G, Seeger, M.A, Barandun, J.
Deposit date:2021-04-28
Release date:2022-05-18
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:Deep mutational scan of a drug efflux pump reveals its structure-function landscape.
Nat.Chem.Biol., 19, 2023
6CB1
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BU of 6cb1 by Molmil
Yeast nucleolar pre-60S ribosomal subunit (state 3)
Descriptor: 35S pre-ribosomal RNA miscRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ...
Authors:Sanghai, Z.A, Miller, L, Barandun, J, Hunziker, M, Chaker-Margot, M, Klinge, S.
Deposit date:2018-02-01
Release date:2018-03-14
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Modular assembly of the nucleolar pre-60S ribosomal subunit.
Nature, 556, 2018
7P3R
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BU of 7p3r by Molmil
Helical structure of the toxin MakA from Vibrio cholera
Descriptor: MakA tetramer
Authors:Berg, A, Nadeem, A, Uhlin, B.E, Wai, S.N, Barandun, J.
Deposit date:2021-07-08
Release date:2022-02-23
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae .
Elife, 11, 2022
6ZU5
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BU of 6zu5 by Molmil
Structure of the Paranosema locustae ribosome in complex with Lso2
Descriptor: 18S rRNA, 25S rRNA, 5S rRNA, ...
Authors:Ehrenbolger, K, Jespersen, N, Sharma, H, Sokolova, Y.Y, Tokarev, Y.S, Vossbrinck, C.R, Barandun, J.
Deposit date:2020-07-21
Release date:2020-11-04
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Differences in structure and hibernation mechanism highlight diversification of the microsporidian ribosome.
Plos Biol., 18, 2020
5TZS
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BU of 5tzs by Molmil
Architecture of the yeast small subunit processome
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 3' domain-associated, ...
Authors:Chaker-Margot, M, Barandun, J, Hunziker, M, Klinge, S.
Deposit date:2016-11-22
Release date:2016-12-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Architecture of the yeast small subunit processome.
Science, 355, 2017
6ND4
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BU of 6nd4 by Molmil
Conformational switches control early maturation of the eukaryotic small ribosomal subunit
Descriptor: 18S rRNA 5' domain start, 5'ETS rRNA, Bud21, ...
Authors:Hunziker, M, Barandun, J, Klinge, S.
Deposit date:2018-12-13
Release date:2019-06-19
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Conformational switches control early maturation of the eukaryotic small ribosomal subunit.
Elife, 8, 2019
6C0F
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BU of 6c0f by Molmil
Yeast nucleolar pre-60S ribosomal subunit (state 2)
Descriptor: 5.8S rRNA, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Sanghai, Z.A, Miller, L, Barandun, J, Hunziker, M, Chaker-Margot, M, Klinge, S.
Deposit date:2017-12-29
Release date:2018-03-14
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Modular assembly of the nucleolar pre-60S ribosomal subunit.
Nature, 556, 2018
4B0S
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BU of 4b0s by Molmil
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DEAMIDASE-DEPUPYLASE DOP, MAGNESIUM ION
Authors:Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
Deposit date:2012-07-04
Release date:2012-09-12
Last modified:2020-04-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structures of Pup Ligase Pafa and Depupylase Dop from the Prokaryotic Ubiquitin-Like Modification Pathway.
Nat.Commun., 3, 2012
4B0R
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BU of 4b0r by Molmil
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway
Descriptor: DEAMIDASE-DEPUPYLASE DOP
Authors:Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
Deposit date:2012-07-04
Release date:2012-09-12
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway.
Nat Commun, 3, 2012
4B0T
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BU of 4b0t by Molmil
Structure of the Pup Ligase PafA of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PUP--PROTEIN LIGASE
Authors:Ozcelik, D, Barandun, J, Schmitz, N, Sutter, M, Guth, E, Damberger, F.F, Allain, F.H.-T, Ban, N, Weber-Ban, E.
Deposit date:2012-07-04
Release date:2012-09-12
Method:X-RAY DIFFRACTION (2.159 Å)
Cite:Structures of Pup Ligase Pafa and Depupylase Dop from the Prokaryotic Ubiquitin-Like Modification Pathway.
Nat.Commun., 3, 2012

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