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5CUQ
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BU of 5cuq by Molmil
Identification and characterization of novel broad spectrum inhibitors of the flavivirus methyltransferase
Descriptor: N,N'-BIS(4-AMINO-2-METHYLQUINOLIN-6-YL)UREA, Nonstructural protein NS5
Authors:Brecher, B, Chen, H, Li, Z, Banavali, N.K, Jones, S.A, Zhang, J, Kramer, L.D, Li, H.M.
Deposit date:2015-07-24
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Identification and Characterization of Novel Broad-Spectrum Inhibitors of the Flavivirus Methyltransferase.
Acs Infect Dis., 1, 2015
3IZZ
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BU of 3izz by Molmil
Models for ribosome components that are nearest neighbors to the bovine mitochondrial initiation factor2 bound to the E. Coli ribosome
Descriptor: Helix 18 (Small Subunit), Helix 44 (Small Subunit), Helix 5, ...
Authors:Yassin, A.S, Haque, E, Datta, P.P, Elmore, K, Banavali, N.K, Spremulli, L.L, Agrawal, R.K.
Deposit date:2011-01-20
Release date:2011-03-30
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1.
Proc.Natl.Acad.Sci.USA, 108, 2011
3IZY
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BU of 3izy by Molmil
Mammalian mitochondrial translation initiation factor 2
Descriptor: Translation initiation factor IF-2, mitochondrial, tRNA-Phe
Authors:Yassin, A.S, Haque, E, Datta, P.P, Elmore, K, Banavali, N.K, Spremulli, L.L, Agrawal, R.K.
Deposit date:2011-01-19
Release date:2011-03-23
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1
Proc.Natl.Acad.Sci.USA, 108, 2011
8FN2
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BU of 8fn2 by Molmil
The structure of a 50S ribosomal subunit in the Lyme disease pathogen Borreliella burgdorferi
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Sharma, M.R, Manjari, S.R, Agrawal, E.K, Keshavan, P, Koripella, R.K, Majumdar, S, Marcinkiewicz, A.L, Lin, Y.P, Agrawal, R.K, Banavali, N.K.
Deposit date:2022-12-26
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structure of a hibernating ribosome in a Lyme disease pathogen.
Nat Commun, 14, 2023
8FMW
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BU of 8fmw by Molmil
The structure of a hibernating ribosome in the Lyme disease pathogen
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Sharma, M.R, Manjari, S.R, Agrawal, E.K, Keshavan, P, Koripella, R.K, Majumdar, S, Marcinkiewicz, A.L, Lin, Y.P, Agrawal, R.K, Banavali, N.K.
Deposit date:2022-12-25
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:The structure of a hibernating ribosome in a Lyme disease pathogen.
Nat Commun, 14, 2023
8FR8
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BU of 8fr8 by Molmil
Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
Descriptor: 16S rRNA (1511-MER), 23S rRNA (3119-MER), 30S ribosomal protein S10, ...
Authors:Majumdar, S, Sharma, M.R, Manjari, S.R, Banavali, N.K, Agrawal, R.K.
Deposit date:2023-01-06
Release date:2023-05-17
Last modified:2023-06-28
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Starvation sensing by mycobacterial RelA/SpoT homologue through constitutive surveillance of translation.
Proc.Natl.Acad.Sci.USA, 120, 2023
1SKM
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BU of 1skm by Molmil
HhaI methyltransferase in complex with DNA containing an abasic south carbocyclic sugar at its target site
Descriptor: 5'-D(*T*GP*TP*CP*AP*GP*(HCX)P*GP*CP*AP*TP*GP*G)-3', 5'-D(*TP*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3', Modification methylase HhaI, ...
Authors:Horton, J.R, Ratner, G, Banavali, N, Huang, N, Marquez, V.E, MacKerell, A.D, Cheng, X.
Deposit date:2004-03-05
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase
Nucleic Acids Res., 32, 2004
6BS8
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BU of 6bs8 by Molmil
The class 3 DnaB intein from Mycobacterium smegmatis
Descriptor: Replicative DNA helicase
Authors:Li, Z, Kelley, D.S, Banavali, N, Belfort, M, Li, H.
Deposit date:2017-12-01
Release date:2018-11-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mycobacterial DnaB helicase intein as oxidative stress sensor.
Nat Commun, 9, 2018
6VMI
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BU of 6vmi by Molmil
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
Descriptor: 12s rRNA, 16s rRNA, 28S ribosomal protein S10, ...
Authors:Sharma, M.R, Koripella, R.K, Agrawal, R.K.
Deposit date:2020-01-28
Release date:2020-08-05
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation.
Nat Commun, 11, 2020
6MX6
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BU of 6mx6 by Molmil
The Prp8 intein of Cryptococcus neoformans
Descriptor: Pre-mRNA-processing-splicing factor 8
Authors:Li, Z, Li, H.
Deposit date:2018-10-30
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.
Plos Biol., 17, 2019
6OWU
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BU of 6owu by Molmil
THE PRP8 INTEIN OF CRYPTOCOCCUS NEOFORMANS in complex with Zn2+
Descriptor: PRP8 protein, ZINC ION
Authors:Li, Z, Li, H.
Deposit date:2019-05-11
Release date:2019-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.
Plos Biol., 17, 2019
7L20
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BU of 7l20 by Molmil
Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.
Descriptor: 16S rRNA mitochondrial, 39 S P-site finger, 39S ribosomal protein L10, ...
Authors:Agrawal, E, Koripella, R.
Deposit date:2020-12-15
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
7L08
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BU of 7l08 by Molmil
Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.
Descriptor: 12S rRNA, 16S RRNA, 28S ribosomal protein S10, ...
Authors:Koripella, R, Agrawal, E.K, Deep, A, Agrawal, R.K.
Deposit date:2020-12-11
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
6VLZ
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BU of 6vlz by Molmil
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
Descriptor: 12s rRNA, 16s rRNA, 28S ribosomal protein S10, ...
Authors:Sharma, M.R, Koripella, R.K, Agrawal, R.K.
Deposit date:2020-01-27
Release date:2020-08-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation.
Nat Commun, 11, 2020

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PDB entries from 2024-03-27

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