Author results

1P58
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COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY 9.5 ANGSTROM CRYO-EM RECONSTRUCTION
Descriptor:Major envelope protein E, Envelope protein M
Authors:Zhang, W., Chipman, P.R., Corver, J., Johnson, P.R., Zhang, Y., Mukhopadhyay, S., Baker, T.S., Strauss, J.H., Rossmann, M.G., Kuhn, R.J.
Deposit date:2003-04-25
Release date:2003-11-04
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Visualization of membrane protein domains by cryo-electron microscopy of dengue virus
Nat.Struct.Biol., 10, 2003
1CWP
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STRUCTURES OF THE NATIVE AND SWOLLEN FORMS OF COWPEA CHLOROTIC MOTTLE VIRUS DETERMINED BY X-RAY CRYSTALLOGRAPHY AND CRYO-ELECTRON MICROSCOPY
Descriptor:RNA (5'-R(*AP*UP*AP*U)-3'), RNA (5'-R(*AP*U)-3'), Coat protein
Authors:Speir, J.A., Johnson, J.E., Munshi, S., Wang, G., Timothy, S., Baker, T.S.
Deposit date:1995-05-22
Release date:1995-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy.
Structure, 3, 1995
1THD
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COMPLEX ORGANIZATION OF DENGUE VIRUS E PROTEIN AS REVEALED BY 9.5 ANGSTROM CRYO-EM RECONSTRUCTION
Descriptor:Major envelope protein E
Authors:Zhang, Y., Zhang, W., Ogata, S., Clements, D., Strauss, J.H., Baker, T.S., Kuhn, R.J., Rossmann, M.G.
Deposit date:2004-06-01
Release date:2004-09-28
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Conformational changes of the flavivirus e glycoprotein
Structure, 12, 2004
3IYM
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BACKBONE TRACE OF THE CAPSID PROTEIN DIMER OF A FUNGAL PARTITIVIRUS FROM ELECTRON CRYOMICROSCOPY AND HOMOLOGY MODELING
Descriptor:Capsid protein
Authors:Tang, J., Pan, J., Havens, W.F., Ochoa, W.F., Li, H., Sinkovits, R.S., Guu, T.S.Y., Ghabrial, S.A., Nibert, M.L., Tao, J.Y., Baker, T.S.
Deposit date:2010-02-05
Release date:2010-07-28
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Backbone Trace of Partitivirus Capsid Protein from Electron Cryomicroscopy and Homology Modeling
Biophys.J., 99, 2010
1LD4
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PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS
Descriptor:Coat protein C, GENERAL CONTROL PROTEIN GCN4, Spike glycoprotein E1, ...
Authors:Zhang, W., Mukhopadhyay, S., Pletnev, S.V., Baker, T.S., Kuhn, R.J., Rossmann, M.G.
Deposit date:2002-04-08
Release date:2002-11-04
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (11.4 Å)
Cite:Placement of the Structural Proteins in Sindbis virus
J.VIROL., 76, 2002
1DGI
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CRYO-EM STRUCTURE OF HUMAN POLIOVIRUS(SEROTYPE 1)COMPLEXED WITH THREE DOMAIN CD155
Descriptor:POLIOVIRUS RECEPTOR, VP1, VP2, ...
Authors:He, Y., Bowman, V.D., Mueller, S., Bator, C.M., Bella, J., Peng, X., Baker, T.S., Wimmer, E., Kuhn, R.J., Rossmann, M.G.
Deposit date:1999-11-24
Release date:2000-01-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (22 Å)
Cite:Interaction of the poliovirus receptor with poliovirus.
Proc.Natl.Acad.Sci.USA, 97, 2000
1DNV
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PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA
Descriptor:GALLERIA MELLONELLA DENSOVIRUS CAPSID PROTEIN
Authors:Simpson, A.A., Chipmann, P.R., Baker, T.S., Tijssen, P., Rossmann, M.G.
Deposit date:1998-07-22
Release date:1999-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The structure of an insect parvovirus (Galleria mellonella densovirus) at 3.7 A resolution.
Structure, 6, 1998
1FOQ
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PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
Descriptor:BACTERIOPHAGE PHI29 PROHEAD RNA
Authors:Simpson, A.A., Tao, Y., Leiman, P.G., Badasso, M.O., He, Y., Jardine, P.J., Olson, N.H., Morais, M.C., Grimes, S., Anderson, D.L., Baker, T.S., Rossmann, M.G.
Deposit date:2000-08-28
Release date:2000-12-22
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
1FOU
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CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29
Descriptor:UPPER COLLAR PROTEIN
Authors:Simpson, A.A., Tao, Y., Leiman, P.G., Badasso, M.O., He, Y., Jardine, P.J., Olson, N.H., Morais, M.C., Grimes, S.N., Anderson, D.L., Baker, T.S., Rossmann, M.G.
Deposit date:2000-08-28
Release date:2000-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
1K4R
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STRUCTURE OF DENGUE VIRUS
Descriptor:MAJOR ENVELOPE PROTEIN E
Authors:Kuhn, R.J., Zhang, W., Rossmann, M.G., Pletnev, S.V., Corver, J., Lenches, E., Jones, C.T., Mukhopadhyay, S., Chipman, P.R., Strauss, E.G., Baker, T.S., Strauss, J.H.
Deposit date:2001-10-08
Release date:2002-03-13
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.
Cell(Cambridge,Mass.), 108, 2002
1M06
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STRUCTURAL STUDIES OF BACTERIOPHAGE ALPHA3 ASSEMBLY, X-RAY CRYSTALLOGRAPHY
Descriptor:Capsid Protein, Major spike protein, Small core protein, ...
Authors:Bernal, R.A., Hafenstein, S., Olson, N.H., Bowman, V., Chipman, P.R., Baker, T.S., Fane, B.A., Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
1M0F
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STRUCTURAL STUDIES OF BACTERIOPHAGE ALPHA3 ASSEMBLY, CRYO-ELECTRON MICROSCOPY
Descriptor:Scaffolding protein D, Capsid Protein F, Major Spike Protein G, ...
Authors:Bernal, R.A., Hafenstein, S., Olson, N.H., Bowman, V.D., Chipman, P.R., Baker, T.S., Fane, B.A., Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
1M11
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STRUCTURAL MODEL OF HUMAN DECAY-ACCELERATING FACTOR BOUND TO ECHOVIRUS 7 FROM CRYO-ELECTRON MICROSCOPY
Descriptor:decay-accelerating factor, COAT PROTEIN VP1, COAT PROTEIN VP2, ...
Authors:He, Y., Lin, F., Chipman, P.R., Bator, C.M., Baker, T.S., Shoham, M., Kuhn, R.J., Medof, M.E., Rossmann, M.G.
Deposit date:2002-06-17
Release date:2002-08-28
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structure of decay-accelerating factor bound to echovirus 7: a virus-receptor complex.
Proc.Natl.Acad.Sci.USA, 99, 2002
1M4X
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PBCV-1 VIRUS CAPSID, QUASI-ATOMIC MODEL
Descriptor:PBCV-1 virus capsid
Authors:Nandhagopal, N., Simpson, A.A., Gurnon, J.R., Yan, X., Baker, T.S., Graves, M.V., Van Etten, J.L., Rossmann, M.G.
Deposit date:2002-07-05
Release date:2002-12-04
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (28 Å)
Cite:The Structure and Evolution of the Major Capsid Protein of a Large, Lipid containing, DNA virus.
Proc.Natl.Acad.Sci.USA, 99, 2002
1N6G
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THE STRUCTURE OF IMMATURE DENGUE-2 PRM PARTICLES
Descriptor:major envelope protein E
Authors:Zhang, Y., Corver, J., Chipman, P.R., Zhang, W., Pletnev, S.V., Sedlak, D., Baker, T.S., Strauss, J.H., Kuhn, R.J., Rossmann, M.G.
Deposit date:2002-11-10
Release date:2003-06-03
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structures of Immature flavivirus particles
EMBO J., 22, 2003
1NA4
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THE STRUCTURE OF IMMATURE YELLOW FEVER VIRUS PARTICLE
Descriptor:major envelope protein E
Authors:Zhang, Y., Corver, J., Chipman, P.R., Lenches, E., Zhang, W., Pletnev, S.V., Sedlak, D., Baker, T.S., Strauss, J.H., Kuhn, R.J., Rossmann, M.G.
Deposit date:2002-11-26
Release date:2003-12-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY
Cite:Structures of immature flavivirus particles
EMBO J., 22, 2003
1TG8
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THE STRUCTURE OF DENGUE VIRUS E GLYCOPROTEIN
Descriptor:envelope glycoprotein, 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
Authors:Zhang, Y., Zhang, W., Ogata, S., Clements, D., Strauss, J.H., Baker, T.S., Rossmann, M.G.
Deposit date:2004-05-28
Release date:2004-09-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Conformational changes of the flavivirus e glycoprotein
Structure, 12, 2004
1TGE
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THE STRUCTURE OF IMMATURE DENGUE VIRUS AT 12.5 ANGSTROM
Descriptor:envelope glycoprotein
Authors:Zhang, Y., Zhang, W., Ogata, S., Clements, D., Strauss, J.H., Baker, T.S., Kuhn, R.J., Rossmann, M.G.
Deposit date:2004-05-28
Release date:2004-09-28
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Conformational changes of the flavivirus e glycoprotein.
Structure, 12, 2004
1UON
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REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF VIRIONS AT 7.6-A RESOLUTION
Descriptor:MINOR CORE PROTEIN LAMBDA 3, 5'-R(*GP*GP*GP*GP*GP*)-3', 5'-R(*UP*AP*GP*CP*CP*CP*CP*CP*)-3', ...
Authors:Zhang, X., Walker, S.B., Chipman, P.R., Nibert, M.L., Baker, T.S.
Deposit date:2003-09-21
Release date:2003-11-13
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Reovirus Polymerase Lambda3 Localized by Cryo-Electron Microscopy of Virions at a Resolution of 7.6 A
Nat.Struct.Biol., 10, 2003
1Z8Y
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MAPPING THE E2 GLYCOPROTEIN OF ALPHAVIRUSES
Descriptor:Spike glycoprotein E1, Spike glycoprotein E2, Capsid protein C
Authors:Mukhopadhyay, S., Zhang, W., Gabler, S., Chipman, P.R., Strauss, E.G., Strauss, J.H., Baker, T.S., Kuhn, R.J., Rossmann, M.G.
Deposit date:2005-03-31
Release date:2006-02-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Mapping the structure and function of the E1 and E2 glycoproteins in alphaviruses.
Structure, 14, 2006
2BPA
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ATOMIC STRUCTURE OF SINGLE-STRANDED DNA BACTERIOPHAGE PHIX174 AND ITS FUNCTIONAL IMPLICATIONS
Descriptor:DNA (5'-D(*AP*AP*AP*AP*C)-3'), PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174)
Authors:McKenna, R., Xia, D., Willingmann, P., Ilag, L.L., Krishnaswamy, S., Rossmann, M.G., Olson, N.H., Baker, T.S., Incardona, N.L.
Deposit date:1991-12-03
Release date:1991-12-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Atomic structure of single-stranded DNA bacteriophage phi X174 and its functional implications.
Nature, 355, 1992
2CSE
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FEATURES OF REOVIRUS OUTER-CAPSID PROTEIN MU1 REVEALED BY ELECTRON AND IMAGE RECONSTRUCTION OF THE VIRION AT 7.0-A RESOLUTION
Descriptor:major outer-capsid protein mu1, major capsid surface protein sigma-3, guanylyltransferase, ...
Authors:Zhang, X., Ji, Y., Zhang, L., Harrison, S.C., Marinescu, D.C., Nibert, M.L., Baker, T.S.
Deposit date:2005-05-21
Release date:2005-10-18
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Features of reovirus outer capsid protein mu1 revealed by electron cryomicroscopy and image reconstruction of the virion at 7.0 Angstrom resolution.
Structure, 13, 2005
3ES5
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CRYSTAL STRUCTURE OF PARTITIVIRUS (PSV-F)
Descriptor:Putative capsid protein
Authors:Pan, J., Dong, L., Lin, L., Ochoa, W.F., Sinkovits, R.S., Havens, W.M., Nibert, M.L., Baker, T.S., Ghabrial, S.A., Tao, Y.J.
Deposit date:2008-10-03
Release date:2009-03-10
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Atomic structure reveals the unique capsid organization of a dsRNA virus.
Proc.Natl.Acad.Sci.USA, 106, 2009
3IYH
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P22 PROCAPSID COAT PROTEIN STRUCTURES REVEAL A NOVEL MECHANISM FOR CAPSID MATURATION: STABILITY WITHOUT AUXILIARY PROTEINS OR CHEMICAL CROSS-LINKS
Descriptor:Coat protein
Authors:Parent, K.N., Khayat, R., Tu, L.H., Suhanovsky, M.M., Cortines, J.R., Teschke, C.M., Johnson, J.E., Baker, T.S.
Deposit date:2009-12-14
Release date:2010-03-31
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
3IYI
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P22 EXPANDED HEAD COAT PROTEIN STRUCTURES REVEAL A NOVEL MECHANISM FOR CAPSID MATURATION: STABILITY WITHOUT AUXILIARY PROTEINS OR CHEMICAL CROSS-LINKS
Descriptor:P22 coat protein in procapsid shells
Authors:Parent, K.N., Khayat, R., Tu, L.H., Suhanovsky, M.M., Cortines, J.R., Teschke, C.M., Johnson, J.E., Baker, T.S.
Deposit date:2009-12-14
Release date:2010-03-31
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010