Author results

1WKS
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SOLUTION STRUCTURE OF AN RNA STEM-LOOP DERIVED FROM THE 3' CONSERVED REGION OF EEL LINE UNAL2
Descriptor:5'-R(*GP*GP*CP*UP*UP*UP*GP*GP*AP*UP*AP*AP*AP*AP*GP*CP*C)-3'
Authors:Baba, S., Kajikawa, M., Okada, N., Kawai, G.
Deposit date:2004-06-04
Release date:2004-06-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of an RNA stem-loop derived from the 3' conserved region of eel LINE UnaL2
Rna, 10, 2004
2D17
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SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV-1 DIMERIZATION INITIATION SITE
Descriptor:5'-R(*CP*GP*GP*CP*AP*AP*GP*AP*GP*GP*CP*GP*AP*CP*CP*C)-3', 5'-R(*GP*GP*GP*UP*CP*GP*GP*CP*UP*UP*GP*CP*UP*G)-3'
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D18
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SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER
Descriptor:5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D19
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SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
Descriptor:5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D1A
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SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER
Descriptor:RNA
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D1B
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SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
Descriptor:RNA
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2FDT
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SOLUTION STRUCTURE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2
Descriptor:36-mer
Authors:Nomura, Y., Baba, S., Nakazato, S., Sakamoto, T., Kajikawa, M., Okada, N., Kawai, G.
Deposit date:2005-12-14
Release date:2006-12-05
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2
Nucleic Acids Res., 34, 2006
2IDE
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CRYSTAL STRUCTURE OF THE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C (TTHA1789) FROM THERMUS THEROMOPHILUS HB8
Descriptor:Molybdenum cofactor biosynthesis protein C, PHOSPHATE ION
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-15
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from Thermus Theromophilus HB8
To be Published
2IEX
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CRYSTAL STRUCTURE OF DIHYDROXYNAPTHOIC ACID SYNTHETASE (GK2873) FROM GEOBACILLUS KAUSTOPHILUS HTA426
Descriptor:Dihydroxynapthoic acid synthetase
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., BaBa, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-19
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of dihydroxynapthoic acid synthetase (GK2873) from Geobacillus kaustophilus HTA426
To be Published
2IIH
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CRYSTAL STRUCTURE OF THE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C (TTHA1789) FROM THERMUS THEROMOPHILUS HB8 (H32 FORM)
Descriptor:Molybdenum cofactor biosynthesis protein C, PHOSPHATE ION
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Baba, S., Chen, L., Liu, Z.-J., Wang, B.-C., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-28
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from thermus theromophilus HB8 (H32 form)
To be Published
2III
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CRYSTAL STRUCTURE OF THE ADENOSYLMETHIONINE DECARBOXYLASE (AQ_254) FROM AQUIFEX AEOLICUS VF5
Descriptor:S-adenosylmethionine decarboxylase proenzyme, MAGNESIUM ION, CALCIUM ION
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-28
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the adenosylmethionine decarboxylase (aq_254) from aquifex aeolicus vf5
To be Published
2IP4
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CRYSTAL STRUCTURE OF GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Phosphoribosylamine--glycine ligase, SULFATE ION
Authors:Sampei, G., Baba, S., Kanagawa, M., Yanai, H., Ishii, T., Kawai, H., Fukai, Y., Ebihara, A., Nakagawa, N., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-11
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2IRP
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CRYSTAL STRUCTURE OF THE L-FUCULOSE-1-PHOSPHATE ALDOLASE (AQ_1979) FROM AQUIFEX AEOLICUS VF5
Descriptor:Putative aldolase class 2 protein aq_1979, CHLORIDE ION, BETA-MERCAPTOETHANOL
Authors:Jeyakanthan, J., Gayathri, D., Yogavel, M., Velmurugan, D., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
To be Published
2IS8
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CRYSTAL STRUCTURE OF THE MOLYBDOPTERIN BIOSYNTHESIS ENZYME MOAB (TTHA0341) FROM THERMUS THEROMOPHILUS HB8
Descriptor:Molybdopterin biosynthesis enzyme, MoaB, FORMIC ACID
Authors:Jeyakanthan, J., Kanaujia, S.P., Vasuki Ranjani, C., Sekar, K., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of the molybdopterin biosynthesis enzyme MoaB (TTHA0341) from thermus theromophilus HB8
To be Published
2OM6
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HYPOTHETICAL PROTEIN (PROBABLE PHOSPHOSERINE PHOSPH (PH0253) FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:Probable phosphoserine phosphatase, SULFATE ION, MAGNESIUM ION, ...
Authors:Jeyakanthan, J., Vaijayanthimala, S., Gayathri, D., Velmurugan, D., Baba, S., Ebihara, A., Shinkai, A., Kuramitsu, S., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-21
Release date:2008-01-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hypothetical Protein (Probable Phosphoserine Phosph (PH0253) from Pyrococcus Horikoshii OT3
To be Published
2YRW
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CRYSTAL STRUCTURE OF GAR SYNTHETASE FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Phosphoribosylglycinamide synthetase, PHOSPHATE ION
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YRX
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CRYSTAL STRUCTURE OF GAR SYNTHETASE FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Phosphoribosylglycinamide synthetase, PHOSPHATE ION, ADENOSINE MONOPHOSPHATE
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YS6
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CRYSTAL STRUCTURE OF GAR SYNTHETASE FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Phosphoribosylglycinamide synthetase, GLYCINE, ADENOSINE MONOPHOSPHATE
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YS7
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CRYSTAL STRUCTURE OF GAR SYNTHETASE FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Phosphoribosylglycinamide synthetase
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YW2
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CRYSTAL STRUCTURE OF GAR SYNTHETASE FROM AQUIFEX AEOLICUS IN COMPLEX WITH ATP
Descriptor:Phosphoribosylamine--glycine ligase, PHOSPHATE ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-19
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2YWB
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CRYSTAL STRUCTURE OF GMP SYNTHETASE FROM THERMUS THERMOPHILUS
Descriptor:GMP synthase [glutamine-hydrolyzing]
Authors:Baba, S., Kanagawa, M., Yanai, H., Ishii, T., Kuramitsu, S., Yokoyama, S., Sampei, G., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2YWC
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CRYSTAL STRUCTURE OF GMP SYNTHETASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH XMP
Descriptor:GMP synthase [glutamine-hydrolyzing], XANTHOSINE-5'-MONOPHOSPHATE
Authors:Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Sampei, G., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2YWR
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CRYSTAL STRUCTURE OF GAR TRANSFORMYLASE FROM AQUIFEX AEOLICUS
Descriptor:Phosphoribosylglycinamide formyltransferase, MAGNESIUM ION, COBALT (II) ION
Authors:Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures and reaction mechanisms of the two related enzymes, PurN and PurU.
J.Biochem., 154, 2013
2YWV
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CRYSTAL STRUCTURE OF SAICAR SYNTHETASE FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Phosphoribosylaminoimidazole succinocarboxamide synthetase, SULFATE ION, MAGNESIUM ION, ...
Authors:Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
To be Published
2YWW
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CRYSTAL STRUCTURE OF ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN FROM METHANOCALDOCOCCUS JANNASCHII
Descriptor:Aspartate carbamoyltransferase regulatory chain, ZINC ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of aspartate carbamoyltransferase regulatory chain from Methanocaldococcus jannaschii
To be Published