Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5ZZ4
DownloadVisualize
BU of 5zz4 by Molmil
Crystal structure of bruton's tyrosine kinase in complex with inhibitor 2e
Descriptor: N-[3-(4-amino-6-{[4-(morpholine-4-carbonyl)phenyl]amino}-1,3,5-triazin-2-yl)-2-methylphenyl]-4-tert-butylbenzamide, Tyrosine-protein kinase BTK
Authors:Kawahata, W, Asami, T, Irie, T, Kiyoi, T, Taniguchi, H, Asamitsu, Y, Inoue, T, Miyake, T, Sawa, M.
Deposit date:2018-05-30
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Design and Synthesis of Novel Amino-triazine Analogues as Selective Bruton's Tyrosine Kinase Inhibitors for Treatment of Rheumatoid Arthritis.
J. Med. Chem., 61, 2018
5YZ7
DownloadVisualize
BU of 5yz7 by Molmil
Crystal structure of OsD14 in complex with D-ring-opened 7'-carba-4BD
Descriptor: (2Z,4S)-5-(4-bromophenyl)-4-hydroxy-2-methylpent-2-enoic acid, Strigolactone esterase D14
Authors:Hirabayashi, K, Jiang, K, Xu, Y, Miyakawa, T, Asami, T, Tanokura, M.
Deposit date:2017-12-13
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Rationally Designed Strigolactone Analogs as Antagonists of the D14 Receptor.
Plant Cell Physiol., 59, 2018
5DNW
DownloadVisualize
BU of 5dnw by Molmil
Crystal structure of KAI2-like protein from Striga (apo state 1)
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, SODIUM ION, ...
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2015-09-10
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
5DNU
DownloadVisualize
BU of 5dnu by Molmil
Crystal structure of Striga KAI2-like protein in complex with karrikin
Descriptor: 1,2-ETHANEDIOL, 3-methyl-2H-furo[2,3-c]pyran-2-one, BENZOIC ACID, ...
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2015-09-10
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
8K5V
DownloadVisualize
BU of 8k5v by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: 6,7-dihydro-4H-[1,3]oxazolo[4,5-c]pyridin-5-yl-(7-ethyl-2H-indazol-3-yl)methanone, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5Y
DownloadVisualize
BU of 8k5y by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: (3-azanyl-4-fluoranyl-5,7,8,9-tetrahydropyrido[4,3-c]azepin-6-yl)-[6-(2-oxidanylpropan-2-yl)-1H-indol-2-yl]methanone, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5W
DownloadVisualize
BU of 8k5w by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: 2-[[5-fluoranyl-7-(methylamino)-1H-indol-2-yl]carbonyl]-N-(2-pyrrol-1-ylethyl)-3,4-dihydro-1H-isoquinoline-7-carboxamide, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5X
DownloadVisualize
BU of 8k5x by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: (6-cyclopropyl-1~{H}-indol-2-yl)-(5,7,8,9-tetrahydropyrido[4,3-c]azepin-6-yl)methanone, CALCIUM ION, CHLORIDE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
5DNV
DownloadVisualize
BU of 5dnv by Molmil
Crystal structure of KAI2-like protein from Striga (apo state 2)
Descriptor: BENZOIC ACID, FORMIC ACID, ShKAI2iB
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2015-09-10
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
7C8L
DownloadVisualize
BU of 7c8l by Molmil
Hybrid designing of potent inhibitors of Striga strigolactone receptor ShHTL7
Descriptor: 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL, GLYCEROL, Hyposensitive to light 7, ...
Authors:Shahul Hameed, U.F, Arold, S.T.
Deposit date:2020-06-02
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Rational design of Striga hermonthica-specific seed germination inhibitors.
Plant Physiol., 188, 2022
7VKA
DownloadVisualize
BU of 7vka by Molmil
Crystal Structure of GH3.6 in complex with an inhibitor
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, Indole-3-acetic acid-amido synthetase GH3.6, ...
Authors:Wang, N, Luo, M, Bao, H, Huang, H.
Deposit date:2021-09-29
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Chemical genetic screening identifies nalacin as an inhibitor of GH3 amido synthetase for auxin conjugation.
Proc.Natl.Acad.Sci.USA, 119, 2022
3VXK
DownloadVisualize
BU of 3vxk by Molmil
Crystal structure of OsD14
Descriptor: Dwarf 88 esterase
Authors:Xue, Y.-L, Miyakawa, T, Hou, F, Qin, H.-M, Tanokura, M.
Deposit date:2012-09-18
Release date:2013-09-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular mechanism of strigolactone perception by DWARF14
Nat Commun, 4, 2013
3WIO
DownloadVisualize
BU of 3wio by Molmil
Crystal structure of OSD14 in complex with hydroxy D-ring
Descriptor: (5R)-5-hydroxy-3-methylfuran-2(5H)-one, Probable strigolactone esterase D14
Authors:Xue, Y.-L, Miyakawa, T, Hou, F, Qin, H.-M, Tanokura, M.
Deposit date:2013-09-22
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of strigolactone perception by DWARF14
Nat Commun, 4, 2013
5Z7Y
DownloadVisualize
BU of 5z7y by Molmil
Crystal structure of Striga hermonthica HTL7 (ShHTL7)
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, Hyposensitive to light 7, ...
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2018-01-30
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5Z7Z
DownloadVisualize
BU of 5z7z by Molmil
Crystal structure of Striga hermonthica Dwarf14 (ShD14)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Dwarf 14, ...
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2018-01-30
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5Z7W
DownloadVisualize
BU of 5z7w by Molmil
Crystal structure of Striga hermonthica HTL1 (ShHTL1)
Descriptor: GLYCEROL, Hyposensitive to light 1, MAGNESIUM ION, ...
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2018-01-30
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.657 Å)
Cite:Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5Z7X
DownloadVisualize
BU of 5z7x by Molmil
Crystal structure of Striga hermonthica HTL4 (ShHTL4)
Descriptor: 1,2-ETHANEDIOL, Hyposensitive to light 4, MAGNESIUM ION
Authors:Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2018-01-30
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.055 Å)
Cite:Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5ZD4
DownloadVisualize
BU of 5zd4 by Molmil
Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*CP*AP*CP*AP*CP*GP*TP*GP*TP*GP*AP*AP*A)-3'), Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1, ...
Authors:Nosaki, S, Miyakawa, T, Xu, Y, Nakamura, A, Hirabayashi, K, Tanokura, M.
Deposit date:2018-02-22
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural basis for brassinosteroid response by BIL1/BZR1.
Nat Plants, 4, 2018
5ZHS
DownloadVisualize
BU of 5zhs by Molmil
Crystal structure of OsD14 in complex with covalently bound KK052
Descriptor: (4-phenylpiperazin-1-yl)(1H-1,2,3-triazol-1-yl)methanone, Strigolactone esterase D14
Authors:Hirabayashi, K, Miyakawa, T, Tanokura, M.
Deposit date:2018-03-13
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses.
Mol Plant, 12, 2019
5ZHT
DownloadVisualize
BU of 5zht by Molmil
Crystal structure of OsD14 in complex with covalently bound KK073
Descriptor: (1H-1,2,3-triazol-1-yl){4-[4-(trifluoromethyl)phenyl]piperazin-1-yl}methanone, Strigolactone esterase D14
Authors:Hirabayashi, K, Miyakawa, T, Tanokura, M.
Deposit date:2018-03-13
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.532 Å)
Cite:Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses.
Mol Plant, 12, 2019
5ZHR
DownloadVisualize
BU of 5zhr by Molmil
Crystal structure of OsD14 in complex with covalently bound KK094
Descriptor: (2,3-dihydro-1H-indol-1-yl)(1H-1,2,3-triazol-1-yl)methanone, Strigolactone esterase D14
Authors:Hirabayashi, K, Miyakawa, T, Tanokura, M.
Deposit date:2018-03-13
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Triazole Ureas Covalently Bind to Strigolactone Receptor and Antagonize Strigolactone Responses.
Mol Plant, 12, 2019

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon