Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1AVV
DownloadVisualize
BU of 1avv by Molmil
HIV-1 NEF PROTEIN, UNLIGANDED CORE DOMAIN
Descriptor: NEGATIVE FACTOR
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1997-09-21
Release date:1998-03-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
Structure, 5, 1997
1AVZ
DownloadVisualize
BU of 1avz by Molmil
V-1 NEF PROTEIN IN COMPLEX WITH WILD TYPE FYN SH3 DOMAIN
Descriptor: FYN TYROSINE KINASE, NEGATIVE FACTOR
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1997-09-23
Release date:1998-03-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
Structure, 5, 1997
1BU1
DownloadVisualize
BU of 1bu1 by Molmil
SRC FAMILY KINASE HCK SH3 DOMAIN
Descriptor: PROTEIN (HEMOPOIETIC CELL KINASE)
Authors:Arold, S, Franken, P, Dumas, C.
Deposit date:1998-09-09
Release date:1998-11-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:RT loop flexibility enhances the specificity of Src family SH3 domains for HIV-1 Nef.
Biochemistry, 37, 1998
4DY6
DownloadVisualize
BU of 4dy6 by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with 2'-phosphate bis(adenosine)-5'-diphosphate
Descriptor: CITRIC ACID, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE, inorganic polyphosphate/ATP-NAD kinase 1
Authors:Poncet-Montange, G, Assairi, L, Arold, S, Pochet, S, Labesse, G.
Deposit date:2012-02-28
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
1NI8
DownloadVisualize
BU of 1ni8 by Molmil
H-NS dimerization motif
Descriptor: DNA-binding protein H-NS
Authors:Bloch, V, Yang, Y, Margeat, E, Chavanieu, A, Aug, M.T, Robert, B, Arold, S, Rimsky, S, Kochoyan, M.
Deposit date:2002-12-22
Release date:2003-02-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The H-NS dimerisation domain defines a new fold contributing to DNA recognition
Nat.Struct.Biol., 10, 2003
2Q5F
DownloadVisualize
BU of 2q5f by Molmil
Crystal structure of LMNADK1 from Listeria monocytogenes
Descriptor: (2S,3S,4R,5R,2'S,3'S,4'R,5'R)-2,2'-[DITHIOBIS(METHYLENE)]BIS[5-(6-AMINO-9H-PURIN-9-YL)TETRAHYDROFURAN-3,4-DIOL], Probable inorganic polyphosphate/ATP-NAD kinase 1
Authors:Poncet-Montange, G, Assairi, L, Arold, S, Pochet, S, Labesse, G.
Deposit date:2007-06-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2I2F
DownloadVisualize
BU of 2i2f by Molmil
Crystal structure of LmNADK1
Descriptor: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION, ...
Authors:Poncet-Montange, G, Assairi, L, Arold, S, Pochet, S, Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2I1W
DownloadVisualize
BU of 2i1w by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes
Descriptor: IODIDE ION, Probable inorganic polyphosphate/ATP-NAD kinase 1
Authors:Poncet-Montange, G, Assairi, L, Arold, S, Pochet, S, Labesse, G.
Deposit date:2006-08-15
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2I29
DownloadVisualize
BU of 2i29 by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes
Descriptor: CITRIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Probable inorganic polyphosphate/ATP-NAD kinase 1
Authors:Poncet-Montange, G, Assairi, L, Arold, S, Pochet, S, Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2JO7
DownloadVisualize
BU of 2jo7 by Molmil
Solution structure of the adhesion protein Bd37 from Babesia divergens
Descriptor: Glycosylphosphatidylinositol-anchored merozoite surface protein
Authors:Auguin, D, Yang, Y, Lohr, F, Arold, S, Schetters, T, Precigout, E, Gorenflot, A, Delbecq, S, Roumestand, C.
Deposit date:2007-02-26
Release date:2007-12-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The Solution Structure of the Adhesion Protein Bd37 from Babesia divergens Reveals Structural Homology with Eukaryotic Proteins Involved in Membrane Trafficking
J.Mol.Biol., 375, 2007
4D8D
DownloadVisualize
BU of 4d8d by Molmil
Crystal structure of HIV-1 NEF Fyn-SH3 R96W variant
Descriptor: GLYCEROL, Protein Nef, Tyrosine-protein kinase Fyn
Authors:Arold, S.T, Hoh, F, Dumas, C.
Deposit date:2012-01-10
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5201 Å)
Cite:Synergy and allostery in ligand binding by HIV-1 Nef.
Biochem.J., 478, 2021
2DRM
DownloadVisualize
BU of 2drm by Molmil
Acanthamoeba myosin I SH3 domain bound to Acan125
Descriptor: 18-mer peptide from Acan125, Acanthamoeba Myosin IB, GLYCEROL, ...
Authors:Houdusse, A, Bahloul, A, Ostap, E.M.
Deposit date:2006-06-09
Release date:2007-05-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The crystal structure of the SH3 domain of Acanthamoeba myosin IB bound to Acan125
To be Published
3FWR
DownloadVisualize
BU of 3fwr by Molmil
Crystal Structure of the CBS domains from the Bacillus subtilis CcpN repressor complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, YqzB protein
Authors:Chaix, D, Arold, S, Hoh, F, Declerck, N.
Deposit date:2009-01-19
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Ligand recognition by the energy sensor domain of the CcpN repressor
To be Published
3FWS
DownloadVisualize
BU of 3fws by Molmil
Crystal Structure of the CBS domains from the Bacillus subtilis CcpN repressor complexed with AppNp, phosphate and magnesium ions
Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Chaix, D, Arold, S, Hoh, F, Declerck, N.
Deposit date:2009-01-19
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Ligand recognition by the energy sensor domain of the CcpN repressor
To be Published
3FV6
DownloadVisualize
BU of 3fv6 by Molmil
Crystal Structure of the CBS domains from the Bacillus subtilis CcpN repressor
Descriptor: YqzB protein
Authors:Chaix, D, Arold, S, Hoh, F, Declerck, N.
Deposit date:2009-01-15
Release date:2010-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Ligand recognition by the energy sensor domain of the CcpN repressor
To be Published
2I2B
DownloadVisualize
BU of 2i2b by Molmil
Crystal structure of LmNADK1 from Listeria monocytogenes
Descriptor: BETA-D-ERYTHROFURANOSYL-ADENOSINE, CITRIC ACID, GLYCEROL, ...
Authors:Poncet-Montange, G, Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2I2D
DownloadVisualize
BU of 2i2d by Molmil
Crystal structure of LmNADK1
Descriptor: BIS{[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL} DIHYDROGEN DIPHOSPHATE, CITRIC ACID, Probable inorganic polyphosphate/ATP-NAD kinase 1
Authors:Poncet-Montange, G, Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2I2C
DownloadVisualize
BU of 2i2c by Molmil
Crystal structure of LmNADK1
Descriptor: (2S,3S,4R,5R,2'S,3'S,4'R,5'R)-2,2'-[DITHIOBIS(METHYLENE)]BIS[5-(6-AMINO-9H-PURIN-9-YL)TETRAHYDROFURAN-3,4-DIOL], Probable inorganic polyphosphate/ATP-NAD kinase 1, TETRAETHYLENE GLYCOL
Authors:Poncet-Montange, G, Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
2I2A
DownloadVisualize
BU of 2i2a by Molmil
Crystal structure of LmNADK1 from Listeria monocytogenes
Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Probable inorganic polyphosphate/ATP-NAD kinase 1
Authors:Labesse, G.
Deposit date:2006-08-16
Release date:2007-08-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NAD kinases use substrate-assisted catalysis for specific recognition of NAD.
J.Biol.Chem., 282, 2007
1QA5
DownloadVisualize
BU of 1qa5 by Molmil
MYRISTOYLATED HIV-1 NEF ANCHOR DOMAIN, NMR, 2 STRUCTURES
Descriptor: PROTEIN (MYRISTOYLATED HIV-1 NEF ANCHOR DOMAIN (MYRISTATE-GLY2 TO TRP57))
Authors:Geyer, M, Kalbitzer, H.R.
Deposit date:1999-04-12
Release date:1999-05-26
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:Structure of the anchor-domain of myristoylated and non-myristoylated HIV-1 Nef protein.
J.Mol.Biol., 289, 1999
1QA4
DownloadVisualize
BU of 1qa4 by Molmil
HIV-1 NEF ANCHOR DOMAIN, NMR, 2 STRUCTURES
Descriptor: Protein Nef
Authors:Geyer, M, Kalbitzer, H.R.
Deposit date:1999-04-12
Release date:1999-05-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the anchor-domain of myristoylated and non-myristoylated HIV-1 Nef protein.
J.Mol.Biol., 289, 1999

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon