Author results

4HBC
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CRYSTAL STRUCTURE OF A CONFORMATION-DEPENDENT RABBIT IGG FAB SPECIFIC FOR AMYLOID PREFIBRILLAR OLIGOMERS
Descriptor:Antigen Binding Fragment, Immunoglobulin IgG - Heavy Chain, Immunoglobulin IgG - Light Chain, ...
Authors:Arai, H.
Deposit date:2012-09-27
Release date:2012-10-31
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of a conformation-dependent rabbit IgG Fab specific for amyloid prefibrillar oligomers.
Biochim.Biophys.Acta, 1820, 2012
1WAB
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PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Descriptor:PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE, ACETATE ION
Authors:Ho, Y.S., Swenson, L., Derewenda, U., Serre, L., Wei, Y., Dauter, Z., Hattori, M., Aoki, J., Arai, H., Adachi, T., Inoue, K., Derewenda, Z.S.
Deposit date:1996-10-30
Release date:1997-11-12
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Brain acetylhydrolase that inactivates platelet-activating factor is a G-protein-like trimer.
Nature, 385, 1997
1BWP
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PROBING THE SUBSTRATE SPECIFICITY OF THE INTRACELLULAR BRAIN PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Descriptor:PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Authors:Ho, Y.S., Sheffield, P.J., Masuyama, J., Arai, H., Li, J., Aoki, J., Inoue, K., Derewenda, U., Derewenda, Z.
Deposit date:1998-09-27
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Probing the Substrate Specificity of the Intracellular Brain Platelet-Activating Factor Acetylhydrolase
Protein Eng., 12, 1999
1BWQ
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PROBING THE SUBSTRATE SPECIFICITY OF THE INTRACELLULAR BRAIN PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Descriptor:PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Authors:Ho, Y.S., Sheffield, P.J., Masuyama, J., Arai, H., Li, J., Aoki, J., Inoue, K., Derewenda, U., Derewenda, Z.
Deposit date:1998-09-27
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Probing the Substrate Specificity of the Intracellular Brain Platelet-Activating Factor Acetylhydrolase
Protein Eng., 12, 1999
1BWR
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PROBING THE SUBSTRATE SPECIFICITY OF THE INTRACELLULAR BRAIN PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Descriptor:PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Authors:Ho, Y.S., Sheffield, P.J., Masuyama, J., Arai, H., Li, J., Aoki, J., Inoue, K., Derewenda, U., Derewenda, Z.
Deposit date:1998-09-27
Release date:1999-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Probing the Substrate Specificity of the Intracellular Brain Platelet-Activating Factor Acetylhydrolase
Protein Eng., 12, 1999
1ES9
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X-RAY CRYSTAL STRUCTURE OF R22K MUTANT OF THE MAMMALIAN BRAIN PLATELET-ACTIVATING FACTOR ACETYLHYDROLASES (PAF-AH)
Descriptor:PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT
Authors:McMullen, T.W.P., Li, J., Sheffield, P.J., Aoki, J., Martin, T.W., Arai, H., Inoue, K., Derewenda, Z.S.
Deposit date:2000-04-07
Release date:2000-05-31
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The functional implications of the dimerization of the catalytic subunits of the mammalian brain platelet-activating factor acetylhydrolase (Ib).
Protein Eng., 13, 2000
2NAO
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ATOMIC RESOLUTION STRUCTURE OF A DISEASE-RELEVANT ABETA(1-42) AMYLOID FIBRIL
Descriptor:Beta-amyloid protein 42
Authors:Waelti, M.A., Ravotti, F., Arai, H., Glabe, C., Wall, J., Bockmann, A., Guntert, P., Meier, B.H., Riek, R.
Deposit date:2016-01-07
Release date:2016-07-27
Last modified:2016-09-07
Method:SOLUTION NMR
Cite:Atomic-resolution structure of a disease-relevant A beta (1-42) amyloid fibril.
Proc.Natl.Acad.Sci.USA, 113, 2016
4IJ5
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CRYSTAL STRUCTURE OF A NOVEL-TYPE PHOSPHOSERINE PHOSPHATASE FROM HYDROGENOBACTER THERMOPHILUS TK-6
Descriptor:Phosphoserine phosphatase 1, CHLORIDE ION, 1,2-ETHANEDIOL
Authors:Chiba, Y., Horita, S., Ohtsuka, J., Arai, H., Nagata, K., Igarashi, Y., Tanokura, M., Ishii, M.
Deposit date:2012-12-21
Release date:2013-03-20
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural units important for activity of a novel-type phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 revealed by crystal structure analysis
J.Biol.Chem., 288, 2013
4IJ6
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CRYSTAL STRUCTURE OF A NOVEL-TYPE PHOSPHOSERINE PHOSPHATASE MUTANT (H9A) FROM HYDROGENOBACTER THERMOPHILUS TK-6 IN COMPLEX WITH L-PHOSPHOSERINE
Descriptor:Phosphoserine phosphatase 1, PHOSPHOSERINE, CHLORIDE ION, ...
Authors:Chiba, Y., Horita, S., Ohtsuka, J., Arai, H., Nagata, K., Igarashi, Y., Tanokura, M., Ishii, M.
Deposit date:2012-12-21
Release date:2013-03-20
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural units important for activity of a novel-type phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 revealed by crystal structure analysis
J.Biol.Chem., 288, 2013
5EGE
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STRUCTURE OF ENPP6, A CHOLINE-SPECIFIC GLYCEROPHOSPHODIESTER-PHOSPHODIESTERASE
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 6, N-ACETYL-D-GLUCOSAMINE, BETA-L-FUCOSE, ...
Authors:Morita, J., Kano, K., Kato, K., Takita, H., Ishitani, R., Nishimasu, H., Nureki, O., Aoki, J.
Deposit date:2015-10-27
Release date:2016-03-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase
Sci Rep, 6, 2016
5EGH
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STRUCTURE OF ENPP6, A CHOLINE-SPECIFIC GLYCEROPHOSPHODIESTER-PHOSPHODIESTERASE IN COMPLEX WITH PHOSPHOCHOLINE
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 6, N-ACETYL-D-GLUCOSAMINE, BETA-L-FUCOSE, ...
Authors:Morita, J., Kano, K., Kato, K., Takita, H., Ishitani, R., Nishimasu, H., Nureki, O., Aoki, J.
Deposit date:2015-10-27
Release date:2016-03-09
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase
Sci Rep, 6, 2016
5GUW
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COMPLEX OF CYTOCHROME CD1 NITRITE REDUCTASE AND NITRIC OXIDE REDUCTASE IN DENITRIFICATION OF PSEUDOMONAS AERUGINOSA
Descriptor:Nitric oxide reductase subunit C, Nitric oxide reductase subunit B, Nitrite reductase, ...
Authors:Terasaka, E., Sugimoto, H., Shiro, Y., Tosha, T.
Deposit date:2016-08-31
Release date:2017-08-16
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dynamics of nitric oxide controlled by protein complex in bacterial system
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5GUX
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CYTOCHROME C-DEPENDENT NITRIC OXIDE REDUCTASE (CNOR) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH XENON
Descriptor:Antibody fab fragment light chain, Antibody fab fragment heavy chain, Nitric oxide reductase subunit B, ...
Authors:Ishii, S., Terasaka, E., Sugimoto, H., Shiro, Y., Tosha, T.
Deposit date:2016-08-31
Release date:2017-08-16
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Dynamics of nitric oxide controlled by protein complex in bacterial system.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1JFR
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CRYSTAL STRUCTURE OF THE STREPTOMYCES EXFOLIATUS LIPASE AT 1.9A RESOLUTION: A MODEL FOR A FAMILY OF PLATELET-ACTIVATING FACTOR ACETYLHYDROLASES
Descriptor:LIPASE
Authors:Wei, Y., Derewenda, Z.S.
Deposit date:1997-07-11
Release date:1998-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a microbial homologue of mammalian platelet-activating factor acetylhydrolases: Streptomyces exfoliatus lipase at 1.9 A resolution.
Structure, 6, 1998
3AJ4
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CRYSTAL STRUCTURE OF THE PH DOMAIN OF EVECTIN-2 FROM HUMAN COMPLEXED WITH O-PHOSPHO-L-SERINE
Descriptor:Pleckstrin homology domain-containing family B member 2, PHOSPHOSERINE, 1,2-ETHANEDIOL
Authors:Okazaki, S., Kato, R., Wakatsuki, S.
Deposit date:2010-05-21
Release date:2011-05-25
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (1 Å)
Cite:Intracellular phosphatidylserine is essential for retrograde membrane traffic through endosomes
Proc.Natl.Acad.Sci.USA, 108, 2011
3VIA
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CRYSTAL STRUCTURE OF THE PH DOMAIN OF EVECTIN-2 FROM HUMAN
Descriptor:Pleckstrin homology domain-containing family B member 2
Authors:Okazaki, S., Kato, R., Wakatsuki, S.
Deposit date:2011-09-26
Release date:2012-01-25
Last modified:2012-02-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of the strict phospholipid binding specificity of the pleckstrin homology domain of human evectin-2
Acta Crystallogr.,Sect.D, 68, 2012
3W67
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CRYSTAL STRUCTURE OF MOUSE ALPHA-TOCOPHEROL TRANSFER PROTEIN IN COMPLEX WITH ALPHA-TOCOPHEROL AND PHOSPHATIDYLINOSITOL-(3,4)-BISPHOSPHATE
Descriptor:Alpha-tocopherol transfer protein, (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate
Authors:Ohto, U., Satow, Y.
Deposit date:2013-02-11
Release date:2013-05-01
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
3W68
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CRYSTAL STRUCTURE OF MOUSE ALPHA-TOCOPHEROL TRANSFER PROTEIN IN COMPLEX WITH ALPHA-TOCOPHEROL AND PHOSPHATIDYLINOSITOL-(4,5)-BISPHOSPHATE
Descriptor:Alpha-tocopherol transfer protein, (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXYBUTOXY)PROPYL BUTYRATE, ...
Authors:Ohto, U., Satow, Y.
Deposit date:2013-02-11
Release date:2013-05-01
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
4CH7
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CRYSTAL STRUCTURE OF THE SIROHEME DECARBOXYLASE NIRDL
Descriptor:NIRD-LIKE PROTEIN
Authors:Schmelz, S., Kriegler, T.M., Haufschildt, K., Layer, G., Heinz, D.W.
Deposit date:2013-11-29
Release date:2014-07-30
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The Crystal Structure of Siroheme Decarboxylase in Complex with Iron-Uroporphyrin III Reveals Two Essential Histidine Residues
J.Mol.Biol., 426, 2014
4CZC
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CRYSTAL STRUCTURE OF THE SIROHEME DECARBOXYLASE NIRDL IN CO-COMPLEX WITH IRON-UROPORPHYRIN III ANALOGUE
Descriptor:NIRD-LIKE PROTEIN, Fe(III) Uroporphyrin
Authors:Schmelz, S., Kriegler, T.M., Haufschildt, K., Layer, G., Heinz, D.W.
Deposit date:2014-04-17
Release date:2014-07-30
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Crystal Structure of Siroheme Decarboxylase in Complex with Iron-Uroporphyrin III Reveals Two Essential Histidine Residues
J.Mol.Biol., 426, 2014
1FXW
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CRYSTAL STRUCTURE OF THE RECOMBINANT ALPHA1/ALPHA2 CATALYTIC HETERODIMER OF BOVINE BRAIN PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB.
Descriptor:PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT, PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT, CALCIUM ION
Authors:Derewenda, Z., Li, J.
Deposit date:2000-09-27
Release date:2001-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Preparation and crystal structure of the recombinant alpha(1)/alpha(2) catalytic heterodimer of bovine brain platelet-activating factor acetylhydrolase Ib.
Protein Eng., 14, 2001
3DT6
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CRYSTAL STRUCTURE OF BOVIN BRAIN PLATELET ACTIVATING FACTOR ACETYLHYDROLASE COVALENTLY INHIBITED BY PARAOXON
Descriptor:Brain Platelet-activating factor acetylhydrolase IB subunit alpha, DIETHYL PHOSPHONATE
Authors:Epstein, T.M., Samanta, U., Bahnson, B.J.
Deposit date:2008-07-14
Release date:2009-05-12
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of brain group-VIII phospholipase A2 in nonaged complexes with the organophosphorus nerve agents soman and sarin.
Biochemistry, 48, 2009
3DT8
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CRYSTAL STRUCTURE OF BOVIN BRAIN PLATELET ACTIVATING FACTOR ACETYLHYDROLASE COVALENTLY INHIBITED BY SARIN
Descriptor:Brain Platelet-activating factor acetylhydrolase IB subunit alpha
Authors:Epstein, T.M., Samanta, U., Bahnson, B.J.
Deposit date:2008-07-14
Release date:2009-05-12
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of brain group-VIII phospholipase A2 in nonaged complexes with the organophosphorus nerve agents soman and sarin.
Biochemistry, 48, 2009
3DT9
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CRYSTAL STRUCTURE OF BOVIN BRAIN PLATELET ACTIVATING FACTOR ACETYLHYDROLASE COVALENTLY INHIBITED BY SOMAN
Descriptor:Brain Platelet-activating factor acetylhydrolase IB subunit alpha, (1R)-1,2,2-TRIMETHYLPROPYL (R)-METHYLPHOSPHINATE
Authors:Epstein, T.M., Samanta, U., Bahnson, B.J.
Deposit date:2008-07-14
Release date:2009-05-12
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of brain group-VIII phospholipase A2 in nonaged complexes with the organophosphorus nerve agents soman and sarin.
Biochemistry, 48, 2009