Author results

1W9M
  • Download 1w9m
  • View 1w9m
Molmil generated image of 1w9m
AS-ISOLATED HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO VULGARIS X-RAY STRUCTURE AT 1.35A RESOLUTION USING IRON ANOMALOUS SIGNAL
Descriptor:HYDROXYLAMINE REDUCTASE, IRON/SULFUR CLUSTER, FE-S-O HYBRID CLUSTER
Authors:Aragao, D., Macedo, S., Mitchell, E.P., Coelho, D., Romao, C.V., Teixeira, M., Lindley, P.F.
Deposit date:2004-10-14
Release date:2005-02-04
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and Functional Relationships in the Hybrid Cluster Protein Family:Structure of the Anaerobically Purified Hybrid Cluster Protein from Desulfovibrio Vulgaris at 1.35 A Resolution
Acta Crystallogr.,Sect.D, 64, 2008
2UX8
  • Download 2ux8
  • View 2ux8
Molmil generated image of 2ux8
CRYSTAL STRUCTURE OF SPHINGOMONAS ELODEA ATCC 31461 GLUCOSE-1- PHOSPHATE URIDYLYLTRANSFERASE IN COMPLEX WITH GLUCOSE-1-PHOSPHATE.
Descriptor:GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE, ALPHA-D-GLUCOSE-1-PHOSPHATE
Authors:Aragao, D., Fialho, A.M., Marques, A.R., Frazao, C., Sa-Correia, I., Mitchell, E.P.
Deposit date:2007-03-27
Release date:2007-05-22
Last modified:2014-10-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Complex of Sphingomonas Elodea Atcc 31461 Glucose-1-Phosphate Uridylyltransferase with Glucose-1-Phosphate Reveals a Novel Quaternary Structure, Unique Among Nucleoside Diphosphate-Sugar Pyrophosphorylase Members.
J.Bacteriol., 189, 2007
1GYO
  • Download 1gyo
  • View 1gyo
Molmil generated image of 1gyo
CRYSTAL STRUCTURE OF THE DI-TETRAHEME CYTOCHROME C3 FROM DESULFOVIBRIO GIGAS AT 1.2 ANGSTROM RESOLUTION
Descriptor:CYTOCHROME C3, A DIMERIC CLASS III C-TYPE CYTOCHROME, HEME C, ...
Authors:Aragao, D., Frazao, C., Sieker, L., Sheldrick, G.M., Legall, J., Carrondo, M.A.
Deposit date:2002-04-29
Release date:2002-05-24
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of Dimeric Cytochrome C3 from Desulfovibrio Gigas at 1.2 A Resolution
Acta Crystallogr.,Sect.D, 59, 2003
1OA1
  • Download 1oa1
  • View 1oa1
Molmil generated image of 1oa1
REDUCED HYBRID CLUSTER PROTEIN (HCP) FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH STRUCTURE AT 1.55A RESOLUTION USING SYNCHROTRON RADIATION.
Descriptor:HYDROXYLAMINE REDUCTASE, IRON/SULFUR CLUSTER, FE4-S3 CLUSTER, ...
Authors:Aragao, D., Macedo, S., Mitchell, E.P., Romao, C.V., Liu, M.Y., Frazao, C., Saraiva, L.M., Xavier, A.V., Legall, J., Van Dongen, W.M.A.M., Hagen, W.R., Teixeira, M., Carrondo, M.A., Lindley, P.F.
Deposit date:2002-12-23
Release date:2003-04-08
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reduced Hybrid Cluster Proteins (Hcp) from Desulfovibrio Desulfuricans Atcc 27774 and Desulfovibrio Vulgaris (Hildenborough): X-Ray Structures at High Resolution Using Synchrotron Radiation
J.Biol.Inorg.Chem., 8, 2003
1OA0
  • Download 1oa0
  • View 1oa0
Molmil generated image of 1oa0
REDUCED HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS X-RAY STRUCTURE AT 1.25A RESOLUTION
Descriptor:PRISMANE PROTEIN, IRON/SULFUR CLUSTER, FE4-S3 CLUSTER, ...
Authors:Macedo, S., Aragao, D., Mitchell, E.P., Romao, C.V., Liu, M.Y., Frazao, C., Saraiva, L.M., Xavier, A.V., Legall, J., Van Dongen, W.M.A.M., Hagen, W.R., Teixeira, M., Carrondo, M.A., Lindley, P.F.
Deposit date:2002-12-23
Release date:2003-04-08
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Reduced hybrid cluster proteins (HCP) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at high resolution using synchrotron radiation.
J. Biol. Inorg. Chem., 8, 2003
1UPX
  • Download 1upx
  • View 1upx
Molmil generated image of 1upx
THE CRYSTAL STRUCTURE OF THE HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS CONTAINING MOLECULES IN THE OXIDIZED AND REDUCED STATES.
Descriptor:HYDROXYLAMINE REDUCTASE, IRON/SULFUR CLUSTER, FE4-S3 CLUSTER, ...
Authors:Aragao, D., Macedo, S., Mitchell, E.P., Lindley, P.F.
Deposit date:2003-10-14
Release date:2003-12-02
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of the Hybrid Cluster Protein (Hcp) from Desulfovibrio Desulfuricans Atcc 27774 Containing Molecules in the Oxidized and Reduced States
Acta Crystallogr.,Sect.D, 59, 2003
3ZE3
  • Download 3ze3
  • View 3ze3
Molmil generated image of 3ze3
CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL KINASE - DELTA7
Descriptor:DIACYLGLYCEROL KINASE, (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ...
Authors:Li, D., Pye, V.E., Lyons, J.A., Vogeley, L., Aragao, D., Caffrey, M.
Deposit date:2012-12-03
Release date:2013-05-22
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase.
Nature, 497, 2013
3ZE4
  • Download 3ze4
  • View 3ze4
Molmil generated image of 3ze4
CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL KINASE - WILD-TYPE
Descriptor:DIACYLGLYCEROL KINASE
Authors:Li, D., Lyons, J.A., Pye, V.E., Vogeley, L., Aragao, D., Caffrey, M.
Deposit date:2012-12-03
Release date:2013-05-22
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (3.702 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase.
Nature, 497, 2013
3ZE5
  • Download 3ze5
  • View 3ze5
Molmil generated image of 3ze5
CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL KINASE - DELTA4
Descriptor:DIACYLGLYCEROL KINASE
Authors:Li, D., Vogeley, L., Pye, V.E., Lyons, J.A., Aragao, D., Caffrey, M.
Deposit date:2012-12-03
Release date:2013-05-22
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Crystal Structure of the Integral Membrane Diacylglycerol Kinase.
Nature, 497, 2013
4UXW
  • Download 4uxw
  • View 4uxw
Molmil generated image of 4uxw
STRUCTURE OF DELTA4-DGKA-APO IN 9.9 MAG
Descriptor:DIACYLGLYCEROL KINASE, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Li, D., Pye, V.E., Aragao, D., Caffrey, M.
Deposit date:2014-08-27
Release date:2015-09-30
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015
5J09
  • Download 5j09
  • View 5j09
Molmil generated image of 5j09
CRYSTAL STRUCTURE OF DECAMERIC BFDV CAPSID PROTEIN
Descriptor:Beak and feather disease virus capsid protein
Authors:Sarker, S., Raidal, S., Aragao, D., Forwood, J.K.
Deposit date:2016-03-28
Release date:2016-05-04
Last modified:2016-10-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
5J36
  • Download 5j36
  • View 5j36
Molmil generated image of 5j36
CRYSTAL STRUCTURE OF 60-MER BFDV CAPSID PROTEIN
Descriptor:Beak and feather disease virus capsid protein, PHOSPHATE ION
Authors:Sarker, S., Raidal, S., Aragao, D., Forwood, J.K.
Deposit date:2016-03-30
Release date:2016-05-04
Last modified:2016-10-12
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
5J37
  • Download 5j37
  • View 5j37
Molmil generated image of 5j37
CRYSTAL STRUCTURE OF 60-MER BFDV CAPSID PROTEIN IN COMPLEX WITH SINGLE STRANDED DNA
Descriptor:Beak and feather disease virus capsid protein, single stranded DNA, PHOSPHATE ION
Authors:Sarker, S., Raidal, S., Aragao, D., Forwood, J.K.
Deposit date:2016-03-30
Release date:2016-05-04
Last modified:2016-10-12
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
2VKR
  • Download 2vkr
  • View 2vkr
Molmil generated image of 2vkr
3FE-4S, 4FE-4S PLUS ZN ACIDIANUS AMBIVALENS FERREDOXIN
Descriptor:ZINC-CONTAINING FERREDOXIN, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Frazao, C., Aragao, D., Coelho, R., Leal, S.S., Gomes, C.M., Teixeira, M., Carrondo, M.A.
Deposit date:2007-12-23
Release date:2008-03-04
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystallographic analysis of the intact metal centres [3Fe-4S](1+/0) and [4Fe-4S](2+/1+) in a Zn(2+) -containing ferredoxin.
FEBS Lett., 582, 2008
2XDC
  • Download 2xdc
  • View 2xdc
Molmil generated image of 2xdc
STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A LIPID CUBIC PHASE.
Descriptor:GRAMICIDIN A, POLYETHYLENE GLYCOL (N=34), SODIUM ION
Authors:Hoefer, N., Aragao, D., Caffrey, M.
Deposit date:2010-04-30
Release date:2010-08-11
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallizing Transmembrane Peptides in Lipidic Mesophases
Biophys.J., 99, 2010
2Y5M
  • Download 2y5m
  • View 2y5m
Molmil generated image of 2y5m
STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 7.7 MONOACYLGLYCEROL LIPID CUBIC PHASE.
Descriptor:VAL-GRAMICIDIN A, POLYETHYLENE GLYCOL (N=34)
Authors:Hoefer, N., Aragao, D., Caffrey, M.
Deposit date:2011-01-14
Release date:2011-05-11
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Membrane Protein Crystallization in Lipidic Mesophases. Hosting Lipid Effects on the Crystallization and Structure of a Transmembrane Peptide
Cryst.Growth Des., 11, 2011
2Y6N
  • Download 2y6n
  • View 2y6n
Molmil generated image of 2y6n
STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 8.8 MONOACYLGLYCEROL LIPID CUBIC PHASE.
Descriptor:VAL-GRAMICIDIN A, POLYETHYLENE GLYCOL (N=34), O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL
Authors:Hoefer, N., Aragao, D., Caffrey, M.
Deposit date:2011-01-25
Release date:2011-05-11
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Membrane Protein Crystallization in Lipidic Mesophases. Hosting Lipid Effects on the Crystallization and Structure of a Transmembrane Peptide
Cryst.Growth Des., 11, 2011
2YEV
  • Download 2yev
  • View 2yev
Molmil generated image of 2yev
STRUCTURE OF CAA3-TYPE CYTOCHROME OXIDASE
Descriptor:CYTOCHROME C OXIDASE POLYPEPTIDE I+III, CYTOCHROME C OXIDASE SUBUNIT 2, CAA3-TYPE CYTOCHROME OXIDASE SUBUNIT IV, ...
Authors:Lyons, J.A., Aragao, D., Soulimane, T., Caffrey, M.
Deposit date:2011-03-31
Release date:2012-05-23
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural Insights Into Electron Transfer in Caa3-Type Cytochrome Oxidases.
Nature, 487, 2012
3PDS
  • Download 3pds
  • View 3pds
Molmil generated image of 3pds
IRREVERSIBLE AGONIST-BETA2 ADRENOCEPTOR COMPLEX
Descriptor:Fusion protein Beta-2 adrenergic receptor/Lysozyme, 8-hydroxy-5-[(1R)-1-hydroxy-2-({2-[3-methoxy-4-(3-sulfanylpropoxy)phenyl]ethyl}amino)ethyl]quinolin-2(1H)-one, CHOLESTEROL, ...
Authors:Rosenbaum, D.M., Zhang, C., Lyons, J.A., Holl, R., Aragao, D., Arlow, D.H., Rasmussen, S.G.F., Choi, H.-J., DeVree, B.T., Sunahara, R.K., Chae, P.S., Gellman, S.H., Dror, R.O., Shaw, D.E., Weis, W.I., Caffrey, M., Gmeiner, P., Kobilka, B.K.
Deposit date:2010-10-24
Release date:2011-01-12
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and function of an irreversible agonist-beta(2) adrenoceptor complex
Nature, 469, 2011
3ZQ8
  • Download 3zq8
  • View 3zq8
Molmil generated image of 3zq8
STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A MONOVACCENIN LIPID CUBIC PHASE
Descriptor:VAL-GRAMICIDIN A, MONOVACCENIN
Authors:Hoefer, N., Aragao, D., Caffrey, M.
Deposit date:2011-06-08
Release date:2012-07-18
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallization of Gramicidin from a Monovaccenin Lipidic Cubic Phase
To be Published
5KMP
  • Download 5kmp
  • View 5kmp
Molmil generated image of 5kmp
THE STRUCTURE OF G164E VARIANT OF TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM
Descriptor:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Cook, G.M., Aragao, D., Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
5KMQ
  • Download 5kmq
  • View 5kmq
Molmil generated image of 5kmq
THE STRUCTURE OF I379E VARIANT OF TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM
Descriptor:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Cook, G.M., Aragao, D., Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
5KMR
  • Download 5kmr
  • View 5kmr
Molmil generated image of 5kmr
THE STRUCTURE OF TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM COMPLEXED WITH NAD+ AT 3.0 ANGSTROM RESOLUTION.
Descriptor:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Cook, G.M., Aragao, D., Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
5KMS
  • Download 5kms
  • View 5kms
Molmil generated image of 5kms
THE STRUCTURE OF TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM COMPLEXED WITH NAD+ AT 2.5 ANGSTROM RESOLUTION.
Descriptor:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Cook, G.M., Aragao, D., Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-02-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
5WED
  • Download 5wed
  • View 5wed
Molmil generated image of 5wed
STRUCTURE OF BACTERIAL TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM AT 2.15A RESOLUTION
Descriptor:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nakatani, Y., Aragao, D., Cook, G.M.
Deposit date:2017-07-09
Release date:2017-10-18
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of type II NADH:quinone oxidoreductase from Caldalkalibacillus thermarum with an improved resolution of 2.15 angstrom.
Acta Crystallogr F Struct Biol Commun, 73, 2017
<123>