Author results

3VM6
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CRYSTAL STRUCTURE OF RIBOSE-1,5-BISPHOSPHATE ISOMERASE FROM THERMOCOCCUS KODAKARENSIS KOD1 IN COMPLEX WITH ALPHA-D-RIBOSE-1,5-BISPHOSPHATE
Descriptor:Translation initiation factor eIF-2B, delta subunit, 1,5-di-O-phosphono-alpha-D-ribofuranose, ...
Authors:Nakamura, A., Fujihashi, M., Aono, R., Sato, T., Nishiba, Y., Yoshida, S., Yano, A., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2011-12-08
Release date:2012-04-25
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Dynamic, ligand-dependent conformational change triggers reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1
J.Biol.Chem., 287, 2012
4GA4
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CRYSTAL STRUCTURE OF AMP PHOSPHORYLASE N-TERMINAL DELETION MUTANT
Descriptor:Putative thymidine phosphorylase, PHOSPHATE ION
Authors:Nishitani, Y., Aono, R., Nakamura, A., Sato, T., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2012-07-25
Release date:2013-05-15
Last modified:2014-03-12
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization
J.Mol.Biol., 425, 2013
4GA5
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CRYSTAL STRUCTURE OF AMP PHOSPHORYLASE C-TERMINAL DELETION MUTANT IN THE APO-FORM
Descriptor:Putative thymidine phosphorylase
Authors:Nishitani, Y., Aono, R., Nakamura, A., Sato, T., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2012-07-25
Release date:2013-05-15
Last modified:2014-03-12
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization
J.Mol.Biol., 425, 2013
4GA6
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CRYSTAL STRUCTURE OF AMP PHOSPHORYLASE C-TERMINAL DELETION MUTANT IN COMPLEX WITH SUBSTRATES
Descriptor:Putative thymidine phosphorylase, ADENOSINE MONOPHOSPHATE, SULFATE ION
Authors:Nishitani, Y., Aono, R., Nakamura, A., Sato, T., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2012-07-25
Release date:2013-05-15
Last modified:2014-03-12
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure analysis of archaeal AMP phosphorylase reveals two unique modes of dimerization
J.Mol.Biol., 425, 2013
1BC6
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7-FE FERREDOXIN FROM BACILLUS SCHLEGELII, NMR, 20 STRUCTURES
Descriptor:7-FE FERREDOXIN, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER
Authors:Aono, S., Bentrop, D., Bertini, I., Donaire, A., Luchinat, C., Niikura, Y., Rosato, A.
Deposit date:1998-05-05
Release date:1998-06-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the oxidized Fe7S8 ferredoxin from the thermophilic bacterium Bacillus schlegelii by 1H NMR spectroscopy.
Biochemistry, 37, 1998
1BD6
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7-FE FERREDOXIN FROM BACILLUS SCHLEGELII, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:7-FE FERREDOXIN, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER
Authors:Aono, S., Bentrop, D., Bertini, I., Donaire, A., Luchinat, C., Niikura, Y., Rosato, A.
Deposit date:1998-05-06
Release date:1998-06-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the oxidized Fe7S8 ferredoxin from the thermophilic bacterium Bacillus schlegelii by 1H NMR spectroscopy.
Biochemistry, 37, 1998
3A11
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CRYSTAL STRUCTURE OF RIBOSE-1,5-BISPHOSPHATE ISOMERASE FROM THERMOCOCCUS KODAKARAENSIS KOD1
Descriptor:Translation initiation factor eIF-2B, delta subunit, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, A., Fujihashi, M., Nishiba, Y., Yoshida, S., Yano, A., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2009-03-25
Release date:2010-03-31
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dynamic, ligand-dependent conformational change triggers reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1
J.Biol.Chem., 287, 2012
3A9C
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CRYSTAL STRUCTURE OF RIBOSE-1,5-BISPHOSPHATE ISOMERASE FROM THERMOCOCCUS KODAKARAENSIS KOD1 IN COMPLEX WITH RIBULOSE-1,5-BISPHOSPHATE
Descriptor:Translation initiation factor eIF-2B, delta subunit, RIBULOSE-1,5-DIPHOSPHATE, ...
Authors:Nakamura, A., Fujihashi, M., Nishiba, Y., Yoshida, S., Yano, A., Atomi, H., Imanaka, T., Miki, K.
Deposit date:2009-10-22
Release date:2010-11-03
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dynamic, ligand-dependent conformational change triggers reaction of ribose-1,5-bisphosphate isomerase from Thermococcus kodakarensis KOD1
J.Biol.Chem., 287, 2012
3WQP
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CRYSTAL STRUCTURE OF RUBISCO T289D MUTANT FROM THERMOCOCCUS KODAKARENSIS
Descriptor:Ribulose bisphosphate carboxylase, MAGNESIUM ION, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, ...
Authors:Fujihashi, M., Nishitani, Y., Kiriyama, T., Miki, K.
Deposit date:2014-01-29
Release date:2015-02-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutation design of thermophilic Rubisco based on the three-dimensional structure enhances its activity at ambient temperature
to be published