Author results

5K1G
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CRYSTAL STRUCTURE OF REDUCED PRX3 FROM VIBRIO VULNIFICUS
Descriptor:1-Cys peroxiredoxin
Authors:Ahn, J., Ha, N.-C.
Deposit date:2016-05-18
Release date:2017-05-24
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Crystal structure of peroxiredoxin 3 fromVibrio vulnificusand its implications for scavenging peroxides and nitric oxide.
IUCrJ, 5, 2018
5K2I
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CRYSTAL STRUCTURE OF OXIDIZED PRX3 FROM VIBRIO VULNIFICUS
Descriptor:1-Cys peroxiredoxin
Authors:Ahn, J., Ha, N.-C.
Deposit date:2016-05-19
Release date:2017-05-24
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Crystal structure of peroxiredoxin 3 fromVibrio vulnificusand its implications for scavenging peroxides and nitric oxide.
IUCrJ, 5, 2018
5K2J
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CRYSTAL STRUCTURE OF REDUCED PRX3 IN COMPLEX WITH H2O2 FROM VIBRIO VULNIFICUS
Descriptor:1-Cys peroxiredoxin, HYDROGEN PEROXIDE
Authors:Ahn, J., Ha, N.-C.
Deposit date:2016-05-19
Release date:2017-05-24
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (1.908 Å)
Cite:Crystal structure of peroxiredoxin 3 fromVibrio vulnificusand its implications for scavenging peroxides and nitric oxide.
IUCrJ, 5, 2018
6MIU
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CRYSTAL STRUCTURE OF P62 ZZ DOMAIN IN COMPLEX WITH ARG-GLU PEPTIDE
Descriptor:Sequestosome-1, Arg-Glu peptide chimera, ZINC ION
Authors:Ahn, J., Zhang, Y., Kutateladze, T.G.
Deposit date:2018-09-20
Release date:2018-10-31
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:ZZ-dependent regulation of p62/SQSTM1 in autophagy.
Nat Commun, 9, 2018
6MJ7
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CRYSTAL STRUCTURE OF P62 ZZ DOMAIN IN COMPLEX WITH FREE ARGININE
Descriptor:Sequestosome-1, ZINC ION, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Ahn, J., Zhang, Y., Kutateladze, T.G.
Deposit date:2018-09-20
Release date:2018-10-31
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (1.412 Å)
Cite:ZZ-dependent regulation of p62/SQSTM1 in autophagy.
Nat Commun, 9, 2018
6O5W
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CRYSTAL STRUCTURE OF MORC3 CW DOMAIN FUSED WITH VIRAL INFLUENZA A NS1 PEPTIDE
Descriptor:NS1-linked peptide,MORC family CW-type zinc finger protein 3, ZINC ION
Authors:Ahn, J., Zhang, Y., Vann, K.R., Kutateleadze, T.
Deposit date:2019-03-04
Release date:2019-05-08
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (1.412 Å)
Cite:MORC3 Is a Target of the Influenza A Viral Protein NS1.
Structure, 27, 2019
2KOD
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A HIGH-RESOLUTION NMR STRUCTURE OF THE DIMERIC C-TERMINAL DOMAIN OF HIV-1 CA
Descriptor:HIV-1 CA C-terminal domain
Authors:Byeon, I.-J.L., Jung, J., Ahn, J., concel, J., Gronenborn, A.M.
Deposit date:2009-09-18
Release date:2009-11-24
Last modified:2012-03-21
Method:SOLUTION NMR
Cite:Structural convergence between Cryo-EM and NMR reveals intersubunit interactions critical for HIV-1 capsid function.
Cell(Cambridge,Mass.), 139, 2009
4BZB
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CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP-BOUND SAMHD1 MUTANT CATALYTIC CORE
Descriptor:DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Ji, X., Yang, H., Wu, Y., Yan, J., Mehrens, J., DeLucia, M., Hao, C., Gronenborn, A.M., Skowronski, J., Ahn, J., Xiong, Y.
Deposit date:2013-07-25
Release date:2013-10-23
Last modified:2013-11-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Mechanism of Allosteric Activation of Samhd1 by Dgtp
Nat.Struct.Mol.Biol., 20, 2013
4BZC
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CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP-BOUND WILD TYPE SAMHD1 CATALYTIC CORE
Descriptor:DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, 2'-deoxyguanosine-5'-O-(1-thiotriphosphate), MANGANESE (II) ION, ...
Authors:Ji, X., Yang, H., Wu, Y., Yan, J., Mehrens, J., DeLucia, M., Hao, C., Gronenborn, A.M., Skowronski, J., Ahn, J., Xiong, Y.
Deposit date:2013-07-25
Release date:2013-10-23
Last modified:2013-11-20
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Mechanism of Allosteric Activation of Samhd1 by Dgtp
Nat.Struct.Mol.Biol., 20, 2013
2M65
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NMR STRUCTURE OF HUMAN RESTRICTION FACTOR APOBEC3A
Descriptor:Probable DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Byeon, I.L., Byeon, C., Ahn, J., Gronenborn, A.M.
Deposit date:2013-03-21
Release date:2013-05-22
Last modified:2013-06-19
Method:SOLUTION NMR
Cite:NMR structure of human restriction factor APOBEC3A reveals substrate binding and enzyme specificity.
Nat Commun, 4, 2013
3J34
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STRUCTURE OF HIV-1 CAPSID PROTEIN BY CRYO-EM
Descriptor:capsid protein
Authors:Zhao, G., Perilla, J.R., Yufenyuy, E., Meng, X., Chen, B., Ning, J., Ahn, J., Gronenborn, A.M., Schulten, K., Aiken, C., Zhang, P.
Deposit date:2013-02-23
Release date:2013-05-29
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
4QFX
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CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP/DATP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-21
Release date:2014-10-15
Last modified:2014-12-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QFY
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CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP/DCTP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2014-12-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QFZ
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CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP/DTTP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, THYMIDINE-5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2014-12-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QG0
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CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP/DUTP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DEOXYURIDINE-5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2014-12-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QG1
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CRYSTAL STRUCTURE OF THE TETRAMERIC GTP/DATP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QG2
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CRYSTAL STRUCTURE OF THE TETRAMERIC GTP/DATP/ATP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2014-12-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QG4
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CRYSTAL STRUCTURE OF THE TETRAMERIC GTP/DATP/ATP-BOUND SAMHD1 (H210A) MUTANT CATALYTIC CORE
Descriptor:Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ...
Authors:Koharudin, L.M.I., Wu, Y., DeLucia, M., Mehrens, J., Gronenborn, A.M., Ahn, J.
Deposit date:2014-05-22
Release date:2014-10-15
Last modified:2014-12-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4Z8L
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CRYSTAL STRUCTURE OF DCAF1/SIV-MND VPX/MND SAMHD1 NTD TERNARY COMPLEX
Descriptor:Protein VPRBP, Vpx protein, SAM domain and HD domain-containing protein, ...
Authors:Koharudin, L.M., Wu, Y., Calero, G., Ahn, J., Gronenborn, A.M.
Deposit date:2015-04-09
Release date:2015-06-17
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis of Clade-specific Engagement of SAMHD1 (Sterile alpha Motif and Histidine/Aspartate-containing Protein 1) Restriction Factors by Lentiviral Viral Protein X (Vpx) Virulence Factors.
J.Biol.Chem., 290, 2015
5FJB
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CYCLOPHILIN A STABILIZE HIV-1 CAPSID THROUGH A NOVEL NON- CANONICAL BINDING SITE
Descriptor:GAG POLYPROTEIN, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
Authors:Liu, C., Perilla, J.R., Ning, J., Lu, M., Hou, G., Ramalhu, R., Bedwell, G.J., Ahn, J., Shi, J., Gronenborn, A.M., Prevelige Jr, P.E., Rousso, I., Aiken, C., Polenova, T., Schulten, K., Zhang, P.
Deposit date:2015-10-07
Release date:2016-03-16
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Cyclophilin a Stabilizes the HIV-1 Capsid Through a Novel Non-Canonical Binding Site.
Nat.Commun., 7, 2016
5JK7
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THE X-RAY STRUCTURE OF THE DDB1-DCAF1-VPR-UNG2 COMPLEX
Descriptor:DNA damage-binding protein 1, Protein VPRBP, Uracil-DNA glycosylase, ...
Authors:Calero, G., Ahn, J., Wu, Y.
Deposit date:2016-04-26
Release date:2016-10-05
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:The DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction.
Nat.Struct.Mol.Biol., 23, 2016
5Y9S
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CRYSTAL STRUCTURE OF VV2_1132, A LYSR FAMILY TRANSCRIPTIONAL REGULATOR
Descriptor:VV2_1132, BROMIDE ION
Authors:Jang, Y., Hong, S., Jo, I., Ahn, J., Ha, N.C.
Deposit date:2017-08-28
Release date:2018-03-28
Last modified:2018-05-09
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:A Novel Tetrameric Assembly Configuration in VV2_1132, a LysR-Type Transcriptional Regulator inVibrio vulnificus
Mol. Cells, 41, 2018
5YDO
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REGULATORY DOMAIN OF HYPT FROM SALMONELLA TYPHIMURIUM (APO-FORM)
Descriptor:Cell density-dependent motility repressor, SULFATE ION
Authors:Jo, I., Hong, S., Ahn, J., Ha, N.C.
Deposit date:2017-09-13
Release date:2018-11-28
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5YDV
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REGULATORY DOMAIN OF HYPT FROM SALMONELLA TYPHIMURIUM COMPLEXED WITH HOCL (HOCL-BOUND FORM)
Descriptor:Cell density-dependent motility repressor, hypochlorous acid, SULFATE ION
Authors:Jo, I., Hong, S., Ahn, J., Ha, N.C.
Deposit date:2017-09-14
Release date:2018-11-28
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5YDW
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FULL-LENGTH STRUCTURE OF HYPT FROM SALMONELLA TYPHIMURIUMA (HYPOCHLORITE-SPECIFIC LYSR-TYPE TRANSCRIPTIONAL REGULATOR)
Descriptor:Cell density-dependent motility repressor
Authors:Jo, I., Hong, S., Ahn, J., Ha, N.C.
Deposit date:2017-09-15
Release date:2018-11-28
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for HOCl recognition and regulation mechanisms of HypT, a hypochlorite-specific transcriptional regulator.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
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