Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1AQM
DownloadVisualize
BU of 1aqm by Molmil
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS COMPLEXED WITH TRIS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALPHA-AMYLASE, CALCIUM ION, ...
Authors:Aghajari, N, Haser, R.
Deposit date:1997-07-31
Release date:1999-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the psychrophilic alpha-amylase from Alteromonas haloplanctis in its native form and complexed with an inhibitor.
Protein Sci., 7, 1998
1AQH
DownloadVisualize
BU of 1aqh by Molmil
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS
Descriptor: ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Aghajari, N, Haser, R.
Deposit date:1997-07-30
Release date:1999-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the psychrophilic alpha-amylase from Alteromonas haloplanctis in its native form and complexed with an inhibitor.
Protein Sci., 7, 1998
1B0I
DownloadVisualize
BU of 1b0i by Molmil
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS
Descriptor: CALCIUM ION, CHLORIDE ION, PROTEIN (ALPHA-AMYLASE)
Authors:Aghajari, N, Haser, R.
Deposit date:1998-11-10
Release date:1999-11-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the psychrophilic Alteromonas haloplanctis alpha-amylase give insights into cold adaptation at a molecular level.
Structure, 6, 1998
1G94
DownloadVisualize
BU of 1g94 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE TERNARY COMPLEX BETWEEN PSYCHROPHILIC ALPHA AMYLASE FROM PSEUDOALTEROMONAS HALOPLANCTIS IN COMPLEX WITH A HEPTA-SACCHARIDE AND A TRIS MOLECULE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Aghajari, N, Roth, M, Haser, R.
Deposit date:2000-11-22
Release date:2001-12-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystallographic evidence of a transglycosylation reaction: ternary complexes of a psychrophilic alpha-amylase.
Biochemistry, 41, 2002
1G9H
DownloadVisualize
BU of 1g9h by Molmil
TERNARY COMPLEX BETWEEN PSYCHROPHILIC ALPHA-AMYLASE, COMII (PSEUDO TRI-SACCHARIDE FROM BAYER) AND TRIS (2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-beta-D-glucopyranose, ALPHA-AMYLASE, ...
Authors:Aghajari, N, Roth, M, Haser, R.
Deposit date:2000-11-23
Release date:2002-06-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic evidence of a transglycosylation reaction: ternary complexes of a psychrophilic alpha-amylase.
Biochemistry, 41, 2002
1JD9
DownloadVisualize
BU of 1jd9 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE MUTANT K300Q OF PSEUDOALTEROMONAS HALOPLANCTIS ALPHA-AMYLASE
Descriptor: ALPHA-AMYLASE, CALCIUM ION
Authors:Aghajari, N, Haser, R.
Deposit date:2001-06-13
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of alpha-amylase activation by chloride
PROTEIN SCI., 11, 2002
1JD7
DownloadVisualize
BU of 1jd7 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE MUTANT K300R OF PSEUDOALTEROMONAS HALOPLANCTIS ALPHA-AMYLASE
Descriptor: ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Aghajari, N, Haser, R.
Deposit date:2001-06-13
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of alpha-amylase activation by chloride
PROTEIN SCI., 11, 2002
1L0P
DownloadVisualize
BU of 1l0p by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE COMPLEX BETWEEN PSYCHROPHILIC ALPHA AMYLASE FROM PSEUDOALTEROMONAS HALOPLANCTIS AND NITRATE
Descriptor: ALPHA-AMYLASE, CALCIUM ION, NITRATE ION
Authors:Aghajari, N, Haser, R.
Deposit date:2002-02-12
Release date:2002-06-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of alpha-amylase activation by chloride.
Protein Sci., 11, 2002
1G9K
DownloadVisualize
BU of 1g9k by Molmil
CRYSTAL STRUCTURE OF A PSYCHROPHILIC ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18
Descriptor: CALCIUM ION, SERRALYSIN, SULFATE ION, ...
Authors:Aghajari, N, Haser, R.
Deposit date:2000-11-24
Release date:2003-02-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structures of a psychrophilic metalloprotease reveal new insights into catalysis by cold-adapted proteases
Proteins, 50, 2003
1KXH
DownloadVisualize
BU of 1kxh by Molmil
Crystal structure of the complex between an inactive mutant of psychrophilic alpha-amylase (D174N) and acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Aghajari, N, Haser, R.
Deposit date:2002-01-31
Release date:2002-06-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic evidence of a transglycosylation reaction: ternary complexes of a psychrophilic alpha-amylase.
Biochemistry, 41
8QYE
DownloadVisualize
BU of 8qye by Molmil
Catalytic core of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF) concieved by deep network hallucination: dEngBF4
Descriptor: 1,2-ETHANEDIOL, ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE
Authors:Aghajari, N.
Deposit date:2023-10-25
Release date:2024-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Carving out a Glycoside Hydrolase Active Site for Incorporation into a New Protein Scaffold Using Deep Network Hallucination.
Acs Synth Biol, 13, 2024
8QZK
DownloadVisualize
BU of 8qzk by Molmil
Catalytic core of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF) concieved by deep network hallucination: dEngBF4 Hexagonal form
Descriptor: ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE
Authors:Aghajari, N, Hansen, A.L, Thiesen, F.F, Crehuet, R, Marcos, E, Willemoes, M.
Deposit date:2023-10-27
Release date:2024-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Carving out a Glycoside Hydrolase Active Site for Incorporation into a New Protein Scaffold Using Deep Network Hallucination.
Acs Synth Biol, 13, 2024
8OR6
DownloadVisualize
BU of 8or6 by Molmil
Crystal structure of Drosophila melanogaster alpha-amylase
Descriptor: Alpha-amylase A, CHLORIDE ION, STRONTIUM ION
Authors:Aghajari, N, Haser, R.
Deposit date:2023-04-13
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Functional Characterization of Drosophila melanogaster alpha-Amylase.
Molecules, 28, 2023
8ORP
DownloadVisualize
BU of 8orp by Molmil
Crystal structure of Drosophila melanogaster alpha-amylase in complex with the inhibitor acarbose
Descriptor: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Aghajari, N, Haser, R.
Deposit date:2023-04-16
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Characterization of Drosophila melanogaster alpha-Amylase.
Molecules, 28, 2023
5CR7
DownloadVisualize
BU of 5cr7 by Molmil
Human cytosolic 5'-nucleotidase II in complex with N-(9H-Purin-6-yl)-3-(3-pyrrol-1-ylphenyl)benzamide
Descriptor: ACETATE ION, Cytosolic purine 5'-nucleotidase, GLYCEROL, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2015-07-22
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of Noncompetitive Inhibitors of Cytosolic 5'-Nucleotidase II Using a Fragment-Based Approach.
J.Med.Chem., 58, 2015
1H71
DownloadVisualize
BU of 1h71 by Molmil
Psychrophilic Protease from Pseudoalteromonas 'TAC II 18'
Descriptor: CALCIUM ION, SERRALYSIN, ZINC ION
Authors:Villeret, V, Van Petegem, F, Aghajari, N, Chessa, J.-P, Gerday, C, Haser, R, Van Beeumen, J.
Deposit date:2001-07-02
Release date:2003-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of a Psychrophilic Metalloprotease Reveal New Insights Into Catalysis by Cold-Adapted Proteases
Proteins: Struct.,Funct., Genet., 50, 2003
6FIS
DownloadVisualize
BU of 6fis by Molmil
Human cytosolic 5'-nucleotidase II soaked with 10mM 7-Benzyloxymethyl-7H-adenine
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6FIW
DownloadVisualize
BU of 6fiw by Molmil
Human cytosolic 5'-nucleotidase II co-crystallized with 10mM Sodium ((4-(3'-((7H-purin-6-yl)carbamoyl)-[1,1'-biphenyl]-3-yl)-1H-imidazol-1-yl) methyl) phosphonate
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6FIR
DownloadVisualize
BU of 6fir by Molmil
Human cytosolic 5'-nucleotidase II soaked with 5mM3-Phenyl-N-(9H-purin-6-yl)benzamide
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6FIU
DownloadVisualize
BU of 6fiu by Molmil
Human cytosolic 5'-nucleotidase II soaked with 10mM 2-(6-([1,1'-Biphenyl]-3-carboxamido)-9H-purin-9-yl)acetic acid
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
6FXH
DownloadVisualize
BU of 6fxh by Molmil
Human cytosolic 5'-nucleotidase II soaked with 10mM 3-Phenyl-N-(9H-purin-6-yl)benzamide
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-03-09
Release date:2019-03-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
2QPS
DownloadVisualize
BU of 2qps by Molmil
"Sugar tongs" mutant Y380A in complex with acarbose
Descriptor: Alpha-amylase type A isozyme, CALCIUM ION
Authors:Aghajari, N, Jensen, M.H, Tranier, S, Haser, R.
Deposit date:2007-07-25
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 'pair of sugar tongs' site on the non-catalytic domain C of barley alpha-amylase participates in substrate binding and activity
Febs J., 274, 2007
2QPU
DownloadVisualize
BU of 2qpu by Molmil
Sugar tongs mutant S378P in complex with acarbose
Descriptor: 1,2-ETHANEDIOL, 1,5-anhydro-4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S,6R)-2,3,4,6-tetrahydroxy-5-methylcyclohexyl]amino}-alpha-D-glucopyranosyl)-D-glucitol, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Aghajari, N, Jensen, M.H, Tranier, S, Haser, R.
Deposit date:2007-07-25
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 'pair of sugar tongs' site on the non-catalytic domain C of barley alpha-amylase participates in substrate binding and activity
Febs J., 274, 2007
3BSH
DownloadVisualize
BU of 3bsh by Molmil
Barley alpha-amylase isozyme 1 (AMY1) double mutant Y105A/Y380A in complex with inhibitor acarbose
Descriptor: Alpha-amylase type A isozyme, CALCIUM ION, beta-D-glucopyranose
Authors:Aghajari, N, Robert, X, Haser, R.
Deposit date:2007-12-24
Release date:2008-08-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Multi-site substrate binding and interplay in barley alpha-amylase 1
Febs Lett., 582, 2008
3BSG
DownloadVisualize
BU of 3bsg by Molmil
Barley alpha-amylase isozyme 1 (AMY1) H395A mutant
Descriptor: Alpha-amylase type A isozyme, CALCIUM ION
Authors:Aghajari, N, Robert, X, Haser, R.
Deposit date:2007-12-24
Release date:2008-08-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Multi-site substrate binding and interplay in barley alpha-amylase 1
Febs Lett., 582, 2008

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon