7OIN
 
 | | Crystal structure of LSSmScarlet - a genetically encoded red fluorescent protein with a large Stokes shift | | Descriptor: | LSSmScarlet - Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift, SODIUM ION, SULFATE ION | | Authors: | Boyko, K.M, Nikolaeva, A.Y, Dorovatovskii, P.V, Subach, O.M, Vlaskina, A.V, Agapova, Y.K, Ivashkina, O.I, Popov, V.O, Subach, F.V. | | Deposit date: | 2021-05-12 | | Release date: | 2022-02-16 | | Last modified: | 2024-01-31 | | Method: | X-RAY DIFFRACTION (1.4 Å) | | Cite: | LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift.
Int J Mol Sci, 22, 2021
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8P6G
 | | Crystal structure of the improved version of the Genetically Encoded Green Calcium Indicator YTnC2-5 | | Descriptor: | DI(HYDROXYETHYL)ETHER, Genetically Encoded Green Calcium Indicator YTnC2-5 based on Troponin C from toadfish | | Authors: | Boyko, K.M, Nikolaeva, A.Y, Subach, O.M, Vlaskina, A.V, Agapova, Y.K, Popov, V.O, Subach, F.V. | | Deposit date: | 2023-05-26 | | Release date: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C.
Febs Open Bio, 13, 2023
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8C0N
 | | Crystal structure of the red form of the mTagFT fluorescent timer | | Descriptor: | Blue-to-red TagFT fluorescent timer | | Authors: | Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Agapova, Y.K, Subach, O.M, Popov, V.O, Subach, F.V. | | Deposit date: | 2022-12-19 | | Release date: | 2023-03-08 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Blue-to-Red TagFT, mTagFT, mTsFT, and Green-to-FarRed mNeptusFT2 Proteins, Genetically Encoded True and Tandem Fluorescent Timers.
Int J Mol Sci, 24, 2023
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5OGU
 | | Structure of DNA-binding HU protein from micoplasma Spiroplasma melliferum | | Descriptor: | DNA-binding protein | | Authors: | Altukhov, D.A, Talyzina, A.A, Agapova, Y.K, Vlaskina, A.V, Korzhenevskiy, D.A, Bocharov, E.V, Rakitina, T.V, Timofeev, V.I. | | Deposit date: | 2017-07-13 | | Release date: | 2017-08-23 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structural plasticity and thermal stability of the histone-like protein from Spiroplasma melliferum are due to phenylalanine insertions into the conservative scaffold.
J.Biomol.Struct.Dyn., 36, 2018
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2NDP
 | | Structure of DNA-binding HU protein from micoplasma Mycoplasma gallisepticum | | Descriptor: | Histone-like DNA-binding superfamily protein | | Authors: | Altukhov, D.A, Talyzina, A.A, Agapova, Y.K, Vlaskina, A.V, Korzhenevskiy, D.A, Bocharov, E.V, Rakitina, T.V, Timofeev, V.I, Popov, V.O. | | Deposit date: | 2016-09-13 | | Release date: | 2016-11-09 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Enhanced conformational flexibility of the histone-like (HU) protein from Mycoplasma gallisepticum.
J.Biomol.Struct.Dyn., 36, 2018
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6U1A
 | | Crystal Structure of Fluorescent Protein FusionRed | | Descriptor: | CALCIUM ION, NICKEL (II) ION, Red fluorescent protein | | Authors: | Pletnev, S, Muslinkina, L, Pletneva, N, Pletnev, V.Z. | | Deposit date: | 2019-08-15 | | Release date: | 2020-04-22 | | Last modified: | 2023-11-15 | | Method: | X-RAY DIFFRACTION (1.09 Å) | | Cite: | Two independent routes of post-translational chemistry in fluorescent protein FusionRed.
Int.J.Biol.Macromol., 155, 2020
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7PZO
 | | mite allergen Der p 3 from Dermatophagoides pteronyssinus | | Descriptor: | SULFATE ION, mite allergen Der p 3 | | Authors: | Timofeev, V.I, Shevtsov, M.B, Abramchik, Y.A, Mikheeva, O.O, Kostromina, M.A, Lykoshin, D.D, Zayats, E.A, Zavriev, S.K, Esipov, R.S, Kuranova, I.P. | | Deposit date: | 2021-10-13 | | Release date: | 2022-11-02 | | Last modified: | 2024-01-31 | | Method: | X-RAY DIFFRACTION (2.25 Å) | | Cite: | Structural plasticity and thermal stability of the histone-like protein from Spiroplasma melliferum are due to phenylalanine insertions into the conservative scaffold.
J.Biomol.Struct.Dyn., 36, 2018
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7NE7
 | | oligopeptidase B from S. proteomaculans with modified hinge region in complex with N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide | | Descriptor: | N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide, Oligopeptidase B, SPERMINE | | Authors: | Petrenko, D.E, Nikolaeva, A.Y, Lazarenko, V.A, Dorovatovskiy, P.V, Vlaskina, A.V, Mikhailova, A.G, Rakitina, T.V, Timofeev, V.I. | | Deposit date: | 2021-02-03 | | Release date: | 2021-02-17 | | Last modified: | 2024-01-31 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | The Crystal Structure of N alpha-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding
Crystals, 11, 2021
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5L8Z
 | | Structure of thermostable DNA-binding HU protein from micoplasma Spiroplasma melliferum | | Descriptor: | DNA-binding protein, SODIUM ION | | Authors: | Boyko, K.M, Gorbacheva, M.A, Rakitina, T.V, Korzhenevskiy, D.A, Kamashev, D.E, Vanyushkina, A.A, Lipkin, A.V, Popov, V.O. | | Deposit date: | 2016-06-09 | | Release date: | 2016-06-22 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (1.4 Å) | | Cite: | Structural basis of the high thermal stability of the histone-like HU protein from the mollicute Spiroplasma melliferum KC3.
Sci Rep, 6, 2016
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8ARM
 | | Crystal structure of LSSmScarlet2 | | Descriptor: | LSSmScarlet2, SULFATE ION | | Authors: | Samygina, V.R, Subach, O.M, Vlaskina, A.V, Subach, F.V. | | Deposit date: | 2022-08-17 | | Release date: | 2022-11-02 | | Last modified: | 2024-01-31 | | Method: | X-RAY DIFFRACTION (1.41 Å) | | Cite: | LSSmScarlet2 and LSSmScarlet3, Chemically Stable Genetically Encoded Red Fluorescent Proteins with a Large Stokes' Shift.
Int J Mol Sci, 23, 2022
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8OSI
 | | Genetically encoded green ratiometric calcium indicator FNCaMP in calcium-bound state | | Descriptor: | CALCIUM ION, mNeonGreen,Calmodulin,Protein kinase domain-containing protein, {(4Z)-2-(aminomethyl)-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid | | Authors: | Varfolomeeva, L.A, Boyko, K.M, Nikolaeva, A.Y, Subach, O.M, Subach, F.V. | | Deposit date: | 2023-04-19 | | Release date: | 2023-05-24 | | Method: | X-RAY DIFFRACTION (2.42 Å) | | Cite: | FNCaMP, ratiometric green calcium indicator based on mNeonGreen protein.
Biochem.Biophys.Res.Commun., 665, 2023
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