Author results

5KAF
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RT XFEL STRUCTURE OF PHOTOSYSTEM II IN THE DARK STATE AT 3.0 A RESOLUTION
分子名称:Photosystem II protein D1 1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
著者Young, I.D., Ibrahim, M., Chatterjee, R., Gul, S., Koroidov, S., Brewster, A.S., Tran, R., Alonso-Mori, R., Fuller, F., Kroll, T., Michels-Clark, T., Laksmono, H., Sierra, R.G., Stan, C.A., Saracini, C., Bean, M.A., Seuffert, I., Sokaras, D., Weng, T.-C., Hunter, M.S., Aquila, A., Koglin, J.E., Robinson, J., Liang, M., Boutet, S., Lyubimov, A.Y., Uervirojnangkoorn, M., Moriarty, N.W., Liebschner, D., Afonine, P.V., Waterman, D.G., Evans, G., Dobbek, H., Weis, W.I., Brunger, A.T., Zwart, P.H., Adams, P.D., Zouni, A., Messinger, J., Bergmann, U., Sauter, N.K., Kern, J., Yachandra, V.K., Yano, J.
登録日2016-06-01
公開日2016-11-23
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (3.00001 Å)
主引用文献Structure of photosystem II and substrate binding at room temperature.
Nature, 540, 2016
5KAI
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NH3-BOUND RT XFEL STRUCTURE OF PHOTOSYSTEM II 500 MS AFTER THE 2ND ILLUMINATION (2F) AT 2.8 A RESOLUTION
分子名称:Photosystem II protein D1 1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
著者Young, I.D., Ibrahim, M., Chatterjee, R., Gul, S., Koroidov, S., Brewster, A.S., Tran, R., Alonso-Mori, R., Fuller, F., Kroll, T., Michels-Clark, T., Laksmono, H., Sierra, R.G., Stan, C.A., Saracini, C., Bean, M.A., Seuffert, I., Sokaras, D., Weng, T.-C., Hunter, M.S., Aquila, A., Koglin, J.E., Robinson, J., Liang, M., Boutet, S., Lyubimov, A.Y., Uervirojnangkoorn, M., Moriarty, N.W., Liebschner, D., Afonine, P.V., Waterman, D.G., Evans, G., Dobbek, H., Weis, W.I., Brunger, A.T., Zwart, P.H., Adams, P.D., Zouni, A., Messinger, J., Bergmann, U., Sauter, N.K., Kern, J., Yachandra, V.K., Yano, J.
登録日2016-06-01
公開日2016-11-23
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.800009 Å)
主引用文献Structure of photosystem II and substrate binding at room temperature.
Nature, 540, 2016
5TIS
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ROOM TEMPERATURE XFEL STRUCTURE OF THE NATIVE, DOUBLY-ILLUMINATED PHOTOSYSTEM II COMPLEX
分子名称:Photosystem II protein D1 1, Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, ...
著者Young, I.D., Ibrahim, M., Chatterjee, R., Gul, S., Fuller, F., Koroidov, S., Brewster, A.S., Tran, R., Alonso-Mori, R., Kroll, T., Michels-Clark, T., Laksmono, H., Sierra, R.G., Stan, C.A., Hussein, R., Zhang, M., Douthit, L., Kubin, M., de Lichtenberg, C., Pham, L.V., Nilsson, H., Cheah, M.H., Shevela, D., Saracini, C., Bean, M.A., Seuffert, I., Sokaras, D., Weng, T.-C., Pastor, E., Weninger, C., Fransson, T., Lassalle, L., Braeuer, P., Aller, P., Docker, P.T., Andi, B., Orville, A.M., Glownia, J.M., Nelson, S., Sikorski, M., Zhu, D., Hunter, M.S., Aquila, A., Koglin, J.E., Robinson, J., Liang, M., Boutet, S., Lyubimov, A.Y., Uervirojnangkoorn, M., Moriarty, N.W., Liebschner, D., Afonine, P.V., Watermann, D.G., Evans, G., Wernet, P., Dobbek, H., Weis, W.I., Brunger, A.T., Zwart, P.H., Adams, P.D., Zouni, A., Messinger, J., Bergmann, U., Sauter, N.K., Kern, J., Yachandra, V.K., Yano, J.
登録日2016-10-03
公開日2016-11-23
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.250004 Å)
主引用文献Structure of photosystem II and substrate binding at room temperature.
Nature, 540, 2016
3J40
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VALIDATED NEAR-ATOMIC RESOLUTION STRUCTURE OF BACTERIOPHAGE EPSILON15 DERIVED FROM CRYO-EM AND MODELING
分子名称:gp10, gp7
著者Baker, M.L., Hryc, C.F., Zhang, Q., Wu, W., Jakana, J., Haase-Pettingell, C., Afonine, P.V., Adams, P.D., King, J.A., Jiang, W., Chiu, W.
登録日2013-05-30
公開日2013-07-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.
Proc.Natl.Acad.Sci.USA, 110, 2013
3J7L
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FULL VIRUS MAP OF BROME MOSAIC VIRUS
分子名称:Capsid protein
著者Wang, Z., Hryc, C., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.H., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.D., Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7M
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VIRUS MODEL OF BROME MOSAIC VIRUS (FIRST HALF DATA SET)
分子名称:Capsid protein
著者Wang, Z., Hryc, C., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.H., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.D., Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7N
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VIRUS MODEL OF BROME MOSAIC VIRUS (SECOND HALF DATA SET)
分子名称:Capsid protein
著者Wang, Z., Hryc, C., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.H., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.D., Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3OS8
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ESTROGEN RECEPTOR
分子名称:Estrogen receptor, 4-[1-benzyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol
著者Bruning, J., Parent, A.A., Gil, G., Zhao, M., Nowak, J., Pace, M.C., Smith, C.L., Afonine, P.V., Adams, P.D., Katzenellenbogen, J.A., Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3OS9
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ESTROGEN RECEPTOR
分子名称:Estrogen receptor, 4-[1-allyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol
著者Bruning, J., Parent, A.A., Gil, G., Zhao, M., Nowak, J., Pace, M.C., Smith, C.L., Afonine, P.V., Adams, P.D., Katzenellenbogen, J.A., Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
3OSA
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ESTROGEN RECEPTOR
分子名称:Estrogen receptor, 4-[1-(3-methylbut-2-en-1-yl)-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol
著者Bruning, J., Parent, A.A., Gil, G., Zhao, M., Nowak, J., Pace, M.C., Smith, C.L., Afonine, P.V., Adams, P.D., Katzenellenbogen, J.A., Nettles, K.W.
登録日2010-09-08
公開日2010-11-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.296 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
5OF4
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THE CRYO-EM STRUCTURE OF HUMAN TFIIH
分子名称:TFIIH basal transcription factor complex helicase XPB subunit,XPB,TFIIH basal transcription factor complex helicase XPB subunit, TFIIH basal transcription factor complex helicase XPD subunit, General transcription factor IIH subunit 4,p52,General transcription factor IIH subunit 4, ...
著者Greber, B.J., Nguyen, T.H.D., Fang, J., Afonine, P.V., Adams, P.D., Nogales, E.
登録日2017-07-10
公開日2017-09-13
最終更新日2018-10-17
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献The cryo-electron microscopy structure of human transcription factor IIH.
Nature, 549, 2017
5UU5
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BACTERIOPHAGE P22 MATURE VIRION CAPSID PROTEIN
分子名称:Major capsid protein
著者Hryc, C.F., Chen, D.-H., Afonine, P.V., Jakana, J., Wang, Z., Haase-Pettingell, C., Jiang, W., Adams, P.D., King, J.A., Schmid, M.F., Chiu, W.
登録日2017-02-16
公開日2017-03-15
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Accurate model annotation of a near-atomic resolution cryo-EM map.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5WNW
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CHAPERONE SPY BOUND TO IM7 6-45 ENSEMBLE
分子名称:Periplasmic chaperone Spy, Colicin-E7 immunity protein, IMIDAZOLE, ...
著者Horowitz, S., Salmon, L., Koldewey, P., Ahlstrom, L.S., Martin, R., Xu, Q., Afonine, P.V., Trievel, R.C., Brooks, C.L., Bardwell, J.C.A.
登録日2017-08-01
公開日2017-08-16
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Visualizing chaperone-assisted protein folding.
Nat. Struct. Mol. Biol., 23, 2016
6DZ1
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STUDIES OF ION TRANSPORT IN K+ CHANNELS
分子名称:Potassium channel protein, POTASSIUM ION, (4S)-2-METHYL-2,4-PENTANEDIOL
著者Langan, P.S., Vandavasi, V.G., Weiss, K.L., Wagner, A., Duman, R., El Omari, K., Afonine, P.V., Coates, L.
登録日2018-07-02
公開日2018-11-14
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Anomalous X-ray diffraction studies of ion transport in K+channels.
Nat Commun, 9, 2018
2QXS
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CRYSTAL STRUCTURE OF ANTAGONIZING MUTANT 536S OF THE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN COMPLEXED TO RALOXIFENE
分子名称:Estrogen receptor, RALOXIFENE
著者Bruning, J.B., Gil, G., Nowak, J., Katzenellenbogen, J., Nettles, K.W.
登録日2007-08-12
公開日2008-09-02
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
2QZO
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CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN COMPLEXED WITH WAY-169916
分子名称:Estrogen receptor, Nuclear receptor coactivator 2, 4-[1-allyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol
著者Bruning, J.B., Gil, G., Nowak, J., Katzenellenbogen, J., Nettles, K.W.
登録日2007-08-16
公開日2008-08-26
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
4TNH
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RT XFEL STRUCTURE OF PHOTOSYSTEM II IN THE DARK STATE AT 4.9 A RESOLUTION
分子名称:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
著者Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (4.900007 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4TNI
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RT XFEL STRUCTURE OF PHOTOSYSTEM II 500 MS AFTER THE THIRD ILLUMINATION AT 4.6 A RESOLUTION
分子名称:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
著者Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (4.6 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4TNJ
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RT XFEL STRUCTURE OF PHOTOSYSTEM II 500 MS AFTER THE 2ND ILLUMINATION (2F) AT 4.5 A RESOLUTION
分子名称:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
著者Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4TNK
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RT XFEL STRUCTURE OF PHOTOSYSTEM II 250 MICROSEC AFTER THE THIRD ILLUMINATION AT 5.2 A RESOLUTION
分子名称:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
著者Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (5.2 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4TNL
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1.8 A RESOLUTION ROOM TEMPERATURE STRUCTURE OF THERMOLYSIN RECORDED USING AN XFEL
分子名称:Thermolysin, ZINC ION, CALCIUM ION
著者Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2015-10-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4YE7
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N-TERMINAL DOMAIN OF ORF22, A CYDIA POMONELLA GRANULOVIRUS ENVELOPE PROTEIN
分子名称:ORF22 similar to XcGV ORF19, ACETATE ION
著者Busby, J.N., Metcalf, P.
登録日2015-02-23
公開日2016-03-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural studies of granulovirus envelope fibres.
To Be Published
5H31
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STRUCTURAL BASIS FOR DIMERIZATION OF THE DEATH EFFECTOR DOMAINS OF CASPASE-8
分子名称:Caspase-8
著者Shen, C., Pei, J., Guo, X., Quan, J.
登録日2016-10-19
公開日2017-10-25
実験手法X-RAY DIFFRACTION (3.169535 Å)
主引用文献Structural basis for dimerization of the death effector domains of Caspase-8
To Be Published
5HLL
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RE-REFINEMENT OF 4G4A: ROOM-TEMPERATURE X-RAY DIFFRACTION STUDY OF CISPLATIN AND ITS BINDING TO HIS15 OF HEWL AFTER 14 MONTHS CHEMICAL EXPOSURE IN THE PRESENCE OF DMSO.
分子名称:Lysozyme C, DIMETHYL SULFOXIDE, CHLORIDE ION, ...
著者Helliwell, J.R.
登録日2016-01-15
公開日2016-03-02
最終更新日2018-08-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5I6U
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THE CRYSTAL STRUCTURE OF PI3KDELTA WITH COMPOUND 32
分子名称:Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, 2-[(1S)-1-({6-amino-5-[(1H-pyrazol-4-yl)ethynyl]pyrimidin-4-yl}amino)ethyl]-5-chloro-3-phenylquinazolin-4(3H)-one
著者Somoza, J.R., Villasenor, A.G.
登録日2016-02-16
公開日2017-02-22
実験手法X-RAY DIFFRACTION (2.842 Å)
主引用文献The crystal structure of PI3Kdelta with compound 32
To Be Published
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