Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
310D
DownloadVisualize
BU of 310d by Molmil
Crystal structure of 2'-O-Me(CGCGCG)2: an RNA duplex at 1.3 A resolution. Hydration pattern of 2'-O-methylated RNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*(OMC)P*(OMG)P*(OMC)P*(OMG)P*(OMC)P*(OMG))-3')
Authors:Adamiak, D.A, Milecki, J, Adamiak, R.W, Dauter, Z, Rypniewski, W.R.
Deposit date:1996-05-25
Release date:1997-06-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of 2'-O-Me(CGCGCG)2, an RNA duplex at 1.30 A resolution. Hydration pattern of 2'-O-methylated RNA.
Nucleic Acids Res., 25, 1997
1I7J
DownloadVisualize
BU of 1i7j by Molmil
CRYSTAL STRUCTURE OF 2'-O-ME(CGCGCG)2: AN RNA DUPLEX AT 1.19 A RESOLUTION. 2-METHYL-2,4-PENTANEDIOL AND MAGNESIUM BINDING.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-R(*(OMC)P*(OMG)P*(OMC)P*(OMG)P*(OMC)P*(OMG))-3', MAGNESIUM ION
Authors:Adamiak, D.A, Rypniewski, W.R, Milecki, J, Adamiak, R.W.
Deposit date:2001-03-09
Release date:2001-09-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:The 1.19 A X-ray structure of 2'-O-Me(CGCGCG)(2) duplex shows dehydrated RNA with 2-methyl-2,4-pentanediol in the minor groove.
Nucleic Acids Res., 29, 2001
3JXR
DownloadVisualize
BU of 3jxr by Molmil
X-Ray structure of r[CGCG(5-fluoro)CG]2
Descriptor: r[CGCG(5-fluoro)CG]2
Authors:Adamiak, D.A, Milecki, J, Adamiak, R.W, Rypniewski, W.
Deposit date:2009-09-21
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The hydration and unusual hydrogen bonding in the crystal structure of an RNA duplex containing alternating CG base pairs
New J.Chem., 34, 2010
3JXQ
DownloadVisualize
BU of 3jxq by Molmil
X-Ray structure of r[CGCG(5-fluoro)CG]2
Descriptor: MAGNESIUM ION, r[CGCG(5-fluoro)CG]2
Authors:Adamiak, D.A, Milecki, J, Adamiak, R.W, Rypniewski, W.
Deposit date:2009-09-21
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The hydration and unusual hydrogen bonding in the crystal structure of an RNA duplex containing alternating CG base pairs
New J.Chem., 34, 2010
3D0M
DownloadVisualize
BU of 3d0m by Molmil
X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex
Descriptor: RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), SULFATE ION
Authors:Rypniewski, W, Adamiak, D.A, Milecki, J, Adamiak, R.W.
Deposit date:2008-05-02
Release date:2008-09-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex.
Rna, 14, 2008
3CZW
DownloadVisualize
BU of 3czw by Molmil
X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex
Descriptor: RNA (5'-R(*G*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), SULFATE ION
Authors:Rypniewski, W, Adamiak, D.A, Milecki, J, Adamiak, R.W.
Deposit date:2008-04-30
Release date:2008-09-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex.
Rna, 14, 2008
1PBL
DownloadVisualize
BU of 1pbl by Molmil
STRUCTURE OF RIBONUCLEIC ACID, NMR, 1 STRUCTURE
Descriptor: RNA (5'-R(*OMCP*OMGP*OMCP*OMGP*OMCP*OMG)-3')
Authors:Popenda, M, Biala, E, Milecki, J, Adamiak, R.W.
Deposit date:1996-08-05
Release date:1997-07-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of RNA duplexes containing alternating CG base pairs: NMR study of r(CGCGCG)2 and 2'-O-Me(CGCGCG)2 under low salt conditions.
Nucleic Acids Res., 25, 1997
1T4X
DownloadVisualize
BU of 1t4x by Molmil
The first left-handed RNA structure of (CGCGCG)2, Z-RNA, NMR, 12 structures, determined in high salt
Descriptor: RNA (5'-R(*CP*GP*CP*GP*CP*G)-3')
Authors:Popenda, M, Milecki, J, Adamiak, R.W.
Deposit date:2004-04-30
Release date:2004-08-03
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:High salt solution structure of a left-handed RNA double helix.
Nucleic Acids Res., 32, 2004
1PBM
DownloadVisualize
BU of 1pbm by Molmil
STRUCTURE OF RIBONUCLEIC ACID, NMR, 1 STRUCTURE
Descriptor: RNA (5'-R(*CP*GP*CP*GP*CP*G)-3')
Authors:Popenda, M, Biala, E, Milecki, J, Adamiak, R.W.
Deposit date:1996-08-05
Release date:1997-07-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of RNA duplexes containing alternating CG base pairs: NMR study of r(CGCGCG)2 and 2'-O-Me(CGCGCG)2 under low salt conditions.
Nucleic Acids Res., 25, 1997
2JXS
DownloadVisualize
BU of 2jxs by Molmil
NMR structure of RNA duplex containing single adenosine bulge
Descriptor: 5'-R(*CP*GP*CP*UP*CP*UP*CP*UP*GP*C)-3', 5'-R(*GP*CP*AP*GP*AP*AP*GP*AP*GP*CP*G)-3'
Authors:Popenda, L, Adamiak, R.W, Gdaniec, Z.
Deposit date:2007-11-29
Release date:2008-05-20
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Bulged adenosine influence on the RNA duplex conformation in solution.
Biochemistry, 47, 2008
2K41
DownloadVisualize
BU of 2k41 by Molmil
NMR structure of uridine bulged RNA duplex
Descriptor: RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_, RNA_(5'-R(*GP*UP*CP*GP*UP*GP*CP*UP*G)-3')_
Authors:Popenda, L, Bielecki, L, Gdaniec, Z, Adamiak, R.W.
Deposit date:2008-05-26
Release date:2008-11-04
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure and dynamics of adenosine bulged RNA duplex reveals formation of the dinucleotide platform in the C:G-A triple
ARKIVOC, 2009, 2008
2K3Z
DownloadVisualize
BU of 2k3z by Molmil
NMR structure of adenosine bulged RNA duplex with C:G-A triple
Descriptor: RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_, RNA_(5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3')_
Authors:Popenda, L, Bielecki, L, Gdaniec, Z, Adamiak, R.W.
Deposit date:2008-05-26
Release date:2008-11-04
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure and dynamics of adenosine bulged RNA duplex reveals formation of the dinucleotide platform in the C:G-A triple
ARKIVOC, 2009, 2008
2JXQ
DownloadVisualize
BU of 2jxq by Molmil
NMR structure of RNA duplex
Descriptor: RNA (5'-R(*CP*GP*CP*UP*CP*UP*CP*UP*GP*C)-3'), RNA (5'-R(*GP*CP*AP*GP*AP*GP*AP*GP*CP*G)-3')
Authors:Popenda, L, Adamiak, R.W, Gdaniec, Z.
Deposit date:2007-11-28
Release date:2008-05-20
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Bulged adenosine influence on the RNA duplex conformation in solution.
Biochemistry, 47, 2008

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon