Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6Q6P
DownloadVisualize
BU of 6q6p by Molmil
Antarctic fish cytoglobin 1 from D.mawsoni
Descriptor: Cytoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Giordano, D, Pesce, A, Vermeylen, S, Abbruzzetti, S, Nardini, M, Marchesani, F, Berghmans, H, Seira, C, Bruno, S, Luque, F.J, di Prisco, G, Ascenzi, P, Dewilde, S, Bolognesi, M, Viappiani, C, Verde, C.
Deposit date:2018-12-11
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional properties of Antarctic fish cytoglobins-1: Cold-reactivity in multi-ligand reactions.
Comput Struct Biotechnol J, 18, 2020
4B3W
DownloadVisualize
BU of 4b3w by Molmil
Crystal structure of human cytoglobin H(E7)Q mutant
Descriptor: ACETATE ION, CYANIDE ION, CYTOGLOBIN, ...
Authors:Gabba, M, Abbruzzetti, S, Spyrakis, F, Forti, F, Bruno, S, Mozzarelli, A, Luque, F.J, Viappiani, C, Cozzini, P, Nardini, M, Germani, F, Bolognesi, M, Moens, L, Dewilde, S.
Deposit date:2012-07-26
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Co Rebinding Kinetics and Molecular Dynamics Simulations Highlight Dynamic Regulation of Internal Cavities in Human Cytoglobin.
Plos One, 8, 2013
3ZOL
DownloadVisualize
BU of 3zol by Molmil
M.acetivorans protoglobin F93Y mutant in complex with cyanide
Descriptor: CYANIDE ION, GLYCEROL, PROTOGLOBIN, ...
Authors:Tilleman, L, Abbruzzetti, S, Ciaccio, C, De Sanctis, G, Nardini, M, Pesce, A, Desmet, F, Moens, L, Van Doorslaer, S, Bruno, S, Bolognesi, M, Ascenzi, P, Coletta, M, Viappiani, C, Dewilde, S.
Deposit date:2013-02-22
Release date:2014-03-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Bases for the Regulation of Co Binding in the Archaeal Protoglobin from Methanosarcina Acetivorans.
Plos One, 10, 2015
3ZOM
DownloadVisualize
BU of 3zom by Molmil
M.acetivorans protoglobin F145W mutant
Descriptor: GLYCEROL, PROTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tilleman, L, Abbruzzetti, S, Ciaccio, C, De Sanctis, G, Nardini, M, Pesce, A, Desmet, F, Moens, L, Van Doorslaer, S, Bruno, S, Bolognesi, M, Ascenzi, P, Coletta, M, Viappiani, C, Dewilde, S.
Deposit date:2013-02-22
Release date:2014-03-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Bases for the Regulation of Co Binding in the Archaeal Protoglobin from Methanosarcina Acetivorans.
Plos One, 10, 2015
6R3W
DownloadVisualize
BU of 6r3w by Molmil
M.tuberculosis nitrobindin with a water molecule coordinated to the heme iron atom
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, UPF0678 fatty acid-binding protein-like protein ERS007657_00996
Authors:De Simone, G, di Masi, A, Polticelli, F, Pesce, A, Nardini, M, Bolognesi, M, Ciaccio, C, Coletta, M, Turilli, E.S, Fasano, M, Tognaccini, L, Smulevich, G, Abbruzzetti, S, Viappiani, C, Bruno, S, Ascenzi, P.
Deposit date:2019-03-21
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mycobacterial and Human Nitrobindins: Structure and Function.
Antioxid.Redox Signal., 33, 2020
6R3Y
DownloadVisualize
BU of 6r3y by Molmil
M.tuberculosis nitrobindin with a cyanide molecule coordinated to the heme iron atom
Descriptor: CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, UPF0678 fatty acid-binding protein-like protein ERS007657_00996
Authors:De Simone, G, di Masi, A, Polticelli, F, Pesce, A, Nardini, M, Bolognesi, M, Ciaccio, C, Coletta, M, Turilli, E.S, Fasano, M, Tognaccini, L, Smulevich, G, Abbruzzetti, S, Viappiani, C, Bruno, S, Ascenzi, P.
Deposit date:2019-03-21
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mycobacterial and Human Nitrobindins: Structure and Function.
Antioxid.Redox Signal., 33, 2020
5M6J
DownloadVisualize
BU of 5m6j by Molmil
Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus
Descriptor: Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2016-10-25
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7.
Sci Rep, 8, 2018
5M6K
DownloadVisualize
BU of 5m6k by Molmil
Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus with imidazole
Descriptor: IMIDAZOLE, Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2016-10-25
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7.
Sci Rep, 8, 2018
4XMF
DownloadVisualize
BU of 4xmf by Molmil
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with histamine
Descriptor: HISTAMINE, Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2015-01-14
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7.
F1000Res, 4, 2015
7OHD
DownloadVisualize
BU of 7ohd by Molmil
CRYSTAL STRUCTURE OF FERRIC MURINE NEUROGLOBIN CDLESS MUTANT
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Exertier, C, Freda, I, Montemiglio, L.C, Savino, C, Cerutti, G, Gugole, E, Vallone, B.
Deposit date:2021-05-10
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the Role of Murine Neuroglobin CDloop-D-Helix Unit in CO Ligand Binding and Structural Dynamics.
Acs Chem.Biol., 17, 2022
2H9W
DownloadVisualize
BU of 2h9w by Molmil
Green fluorescent protein ground states: the influence of a second protonation site near the chromophore
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Garau, G.
Deposit date:2006-06-12
Release date:2007-04-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore.
Biochemistry, 46, 2007
4ESA
DownloadVisualize
BU of 4esa by Molmil
X-ray structure of carbonmonoxy hemoglobin of Eleginops maclovinus
Descriptor: CARBON MONOXIDE, GLYCEROL, Hemoglobin alpha chain, ...
Authors:Merlino, A, Vitagliano, L, Mazzarella, L, Vergara, A.
Deposit date:2012-04-23
Release date:2012-11-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:ATP regulation of the ligand-binding properties in temperate and cold-adapted haemoglobins. X-ray structure and ligand-binding kinetics in the sub-Antarctic fish Eleginops maclovinus.
Mol Biosyst, 8, 2012
4XMG
DownloadVisualize
BU of 4xmg by Molmil
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with imidazole
Descriptor: IMIDAZOLE, Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2015-01-14
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7.
F1000Res, 4, 2015
4XMD
DownloadVisualize
BU of 4xmd by Molmil
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8
Descriptor: Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2015-01-14
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7.
F1000Res, 4, 2015
4XME
DownloadVisualize
BU of 4xme by Molmil
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with NO
Descriptor: GLYCEROL, NITRIC OXIDE, Nitrophorin-7, ...
Authors:Ogata, H.
Deposit date:2015-01-14
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7.
F1000Res, 4, 2015
4XMH
DownloadVisualize
BU of 4xmh by Molmil
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with Gly-Gly-Gly
Descriptor: GLY-GLY-GLY, GLYCEROL, Nitrophorin-7, ...
Authors:Ogata, H.
Deposit date:2015-01-14
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7.
F1000Res, 4, 2015
4XMC
DownloadVisualize
BU of 4xmc by Molmil
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 5.8
Descriptor: Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2015-01-14
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.421 Å)
Cite:Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7.
F1000Res, 4, 2015

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon