Author results

1ZRP
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SOLUTION-STATE STRUCTURE BY NMR OF ZINC-SUBSTITUTED RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor:RUBREDOXIN, ZINC ION
Authors:Blake, P.R., Park, J.B., Zhou, Z.H., Hare, D.R., Adams, M.W.W., Summers, M.F.
Deposit date:1992-07-10
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution-state structure by NMR of zinc-substituted rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
5TC1
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IN SITU STRUCTURES OF THE GENOME AND GENOME-DELIVERY APPARATUS IN SSRNA BACTERIOPHAGE MS2
Descriptor:Capsid protein, Maturation protein, phage MS2 genome
Authors:Dai, X.H., Li, Z.H., Lai, M., Shu, S., Du, Y.S., Zhou, Z.H., Sun, R.
Deposit date:2016-09-13
Release date:2016-12-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus.
Nature, 541, 2017
6NSJ
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CRYOEM STRUCTURE OF HELICOBACTER PYLORI UREA CHANNEL IN CLOSED STATE
Descriptor:Acid-activated urea channel, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE
Authors:Cui, Y.X., Zhou, K., Strugatsky, D., Wen, Y., Sachs, G., Munson, K., Zhou, Z.H.
Deposit date:2019-01-24
Release date:2019-04-03
Last modified:2019-12-04
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM.
Sci Adv, 5, 2019
6NSK
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CRYOEM STRUCTURE OF HELICOBACTER PYLORI UREA CHANNEL IN OPEN STATE.
Descriptor:Acid-activated urea channel, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE
Authors:Cui, Y.X., Zhou, K., Strugatsky, D., Wen, Y., Sachs, G., Munson, K., Zhou, Z.H.
Deposit date:2019-01-24
Release date:2019-04-03
Last modified:2019-12-04
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM.
Sci Adv, 5, 2019
6Q1F
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ATOMIC STRUCTURE OF THE HUMAN HERPESVIRUS 6B CAPSID AND CAPSID-ASSOCIATED TEGUMENT COMPLEXES
Descriptor:Major capsid protein, Large structural phosphoprotein, Small capsomere-interacting protein, ...
Authors:Zhang, Y.B., Liu, W., Li, Z.H., Kumar, V., Alvarez-Cabrera, A.L., Leibovitch, E., Cui, Y.X., Mei, Y., Bi, G.Q., Jacobson, S., Zhou, Z.H.
Deposit date:2019-08-03
Release date:2019-12-11
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Atomic structure of the human herpesvirus 6B capsid and capsid-associated tegument complexes.
Nat Commun, 10, 2019
6TY8
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IN SITU STRUCTURE OF BMCPV RNA DEPENDENT RNA POLYMERASE AT QUIESCENT STATE
Descriptor:RNA-dependent RNA Polymerase, Viral structural protein 4, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE
Authors:Cui, Y.X., Zhang, Y.N., Sun, J.C., Zhou, Z.H.
Deposit date:2019-08-08
Release date:2019-11-20
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TY9
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IN SITU STRUCTURE OF BMCPV RNA DEPENDENT RNA POLYMERASE AT INITIATION STATE
Descriptor:RNA-dependent RNA Polymerase, Viral structural protein 4, Transcript, ...
Authors:Cui, Y.X., Zhang, Y.N., Sun, J.C., Zhou, Z.H.
Deposit date:2019-08-08
Release date:2019-11-20
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ0
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IN SITU STRUCTURE OF BMCPV RNA-DEPENDENT RNA POLYMERASE AT ABORTIVE STATE
Descriptor:RNA-dependent RNA Polymerase, Viral structural protein 4
Authors:Cui, Y.X., Zhang, Y.N., Sun, J.C., Zhou, Z.H.
Deposit date:2019-08-09
Release date:2019-11-20
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ1
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IN SITU STRUCTURE OF BMCPV RNA-DEPENDENT RNA POLYMERASE AT EARLY-ELONGATION STATE
Descriptor:RNA-dependent RNA Polymerase, Viral structural protein 4, Transcript (5'-R(P*UP*UP*UP*UP*UP*CP*CP*CP*U)-3'), ...
Authors:Cui, Y.X., Zhang, Y.N., Sun, J.C., Zhou, Z.H.
Deposit date:2019-08-09
Release date:2019-11-20
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
6TZ2
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IN SITU STRUCTURE OF BMCPV RNA-DEPENDENT RNA POLYMERASE AT ELONGATION STATE
Descriptor:RNA-dependent RNA Polymerase, Viral structural protein 4, Transcript RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ...
Authors:Cui, Y.X., Zhang, Y.N., Sun, J.C., Zhou, Z.H.
Deposit date:2019-08-09
Release date:2019-11-20
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Conservative transcription in three steps visualized in a double-stranded RNA virus.
Nat.Struct.Mol.Biol., 26, 2019
1CAA
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X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor:RUBREDOXIN, FE (III) ION
Authors:Day, M.W., Hsu, B.T., Joshua-Tor, L., Park, J.B., Zhou, Z.H., Adams, M.W.W., Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1CAD
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X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor:RUBREDOXIN, FE (III) ION
Authors:Day, M.W., Hsu, B.T., Joshua-Tor, L., Park, J.B., Zhou, Z.H., Adams, M.W.W., Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
2WYY
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CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS
Descriptor:NUCLEOPROTEIN, POLY-URIDINE
Authors:Ge, P., Tsao, J., Green, T.J., Luo, M., Zhou, Z.H.
Deposit date:2009-11-20
Release date:2010-02-16
Last modified:2019-10-30
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Cryo-Em Model of the Bullet-Shaped Vesicular Stomatitis Virus.
Science, 327, 2010
3B8K
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STRUCTURE OF THE TRUNCATED HUMAN DIHYDROLIPOYL ACETYLTRANSFERASE (E2)
Descriptor:Dihydrolipoyllysine-residue acetyltransferase
Authors:Yu, X., Hiromasa, Y., Tsen, H., Stoops, J.K., Roche, T.E., Zhou, Z.H.
Deposit date:2007-11-01
Release date:2008-01-22
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Structures of the human pyruvate dehydrogenase complex cores: a highly conserved catalytic center with flexible N-terminal domains
Structure, 16, 2008
3CNF
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3.88 ANGSTROM STRUCTURE OF CYTOPLASMIC POLYHEDROSIS VIRUS BY CRYO-ELECTRON MICROSCOPY
Descriptor:VP1, VP3
Authors:Yu, X., Jin, L., Zhou, Z.H.
Deposit date:2008-03-25
Release date:2008-04-29
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:3.88 A structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy.
Nature, 453, 2008
3IYK
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BLUETONGUE VIRUS STRUCTURE REVEALS A SIALIC ACID BINDING DOMAIN, AMPHIPATHIC HELICES AND A CENTRAL COILED COIL IN THE OUTER CAPSID PROTEINS
Descriptor:VP5, VP2, 2-O-METHYL-5-N-ACETYL-ALPHA-D- NEURAMINIC ACID
Authors:Zhang, X., Boyce, M., Bhattacharya, B., Zhang, X., Schein, S., Roy, P., Zhou, Z.H.
Deposit date:2010-01-25
Release date:2010-04-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Bluetongue virus coat protein VP2 contains sialic acid-binding domains, and VP5 resembles enveloped virus fusion proteins.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IYL
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ATOMIC CRYOEM STRUCTURE OF A NONENVELOPED VIRUS SUGGESTS HOW MEMBRANE PENETRATION PROTEIN IS PRIMED FOR CELL ENTRY
Descriptor:Outer capsid VP4, Core protein VP6, VP1, ...
Authors:Zhang, X., Jin, L., Fang, Q., Hui, W., Zhou, Z.H.
Deposit date:2010-02-02
Release date:2010-05-12
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:3.3 A cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry.
Cell(Cambridge,Mass.), 141, 2010
3IZX
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3.1 ANGSTROM CRYOEM STRUCTURE OF CYTOPLASMIC POLYHEDROSIS VIRUS
Descriptor:Structural protein VP3, Capsid protein VP1, Viral structural protein 5
Authors:Yu, X., Ge, P., Jiang, J., Atanasov, I., Zhou, Z.H.
Deposit date:2011-01-15
Release date:2011-06-22
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Atomic Model of CPV Reveals the Mechanism Used by This Single-Shelled Virus to Economically Carry Out Functions Conserved in Multishelled Reoviruses.
Structure, 19, 2011
3J06
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CRYOEM HELICAL RECONSTRUCTION OF TMV
Descriptor:Coat protein, 5'-R(P*AP*UP*G)-3'
Authors:Ge, P., Zhou, Z.H.
Deposit date:2011-04-26
Release date:2011-06-01
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Hydrogen-bonding networks and RNA bases revealed by cryo electron microscopy suggest a triggering mechanism for calcium switches.
Proc.Natl.Acad.Sci.USA, 108, 2011
3J27
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CRYOEM STRUCTURE OF DENGUE VIRUS
Descriptor:Envelope protein E, Small envelope protein M, N-ACETYL-D-GLUCOSAMINE
Authors:Zhang, X., Ge, P., Yu, X., Brannan, J.M., Bi, G., Zhang, Q., Schein, S., Zhou, Z.H.
Deposit date:2012-09-26
Release date:2012-12-19
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the mature dengue virus at 3.5-A resolution.
Nat.Struct.Mol.Biol., 20, 2012
3J2P
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CRYOEM STRUCTURE OF DENGUE VIRUS ENVELOPE PROTEIN HETEROTETRAMER
Descriptor:Envelope protein E, Small envelope protein M, N-ACETYL-D-GLUCOSAMINE
Authors:Zhang, X., Ge, P., Yu, X., Brannan, J.M., Bi, G., Zhang, Q., Schein, S., Zhou, Z.H.
Deposit date:2012-11-30
Release date:2012-12-19
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the mature dengue virus at 3.5-A resolution.
Nat.Struct.Mol.Biol., 20, 2012
3J2V
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CRYOEM STRUCTURE OF HBV CORE
Descriptor:PreC/core protein
Authors:Yu, X., Jin, L., Jih, J., Shih, C., Zhou, Z.H.
Deposit date:2013-01-11
Release date:2013-10-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:3.5 angstrom cryoEM Structure of Hepatitis B Virus Core Assembled from Full-Length Core Protein.
Plos One, 8, 2013
3J4U
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A NEW TOPOLOGY OF THE HK97-LIKE FOLD REVEALED IN BORDETELLA BACTERIOPHAGE: NON-COVALENT CHAINMAIL SECURED BY JELLYROLLS
Descriptor:major capsid protein, cementing protein
Authors:Zhang, X., Guo, H., Jin, L., Czornyj, E., Hodes, A., Hui, W.H., Nieh, A.W., Miller, J.F., Zhou, Z.H.
Deposit date:2013-10-09
Release date:2013-12-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5 A resolution.
Elife, 2, 2013
3J9C
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CRYOEM SINGLE PARTICLE RECONSTRUCTION OF ANTHRAX TOXIN PROTECTIVE ANTIGEN PORE AT 2.9 ANGSTROM RESOLUTION
Descriptor:Protective antigen PA-63, CALCIUM ION
Authors:Jiang, J., Pentelute, B.L., Collier, R.J., Zhou, Z.H.
Deposit date:2014-12-25
Release date:2015-03-11
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Atomic structure of anthrax protective antigen pore elucidates toxin translocation.
Nature, 521, 2015
3J9D
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ATOMIC STRUCTURE OF A NON-ENVELOPED VIRUS REVEALS PH SENSORS FOR A COORDINATED PROCESS OF CELL ENTRY
Descriptor:Outer capsid protein VP2, ZINC ION
Authors:Zhang, X., Patel, A., Celma, C., Roy, P., Zhou, Z.H.
Deposit date:2015-01-09
Release date:2015-12-09
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Atomic model of a nonenveloped virus reveals pH sensors for a coordinated process of cell entry.
Nat.Struct.Mol.Biol., 23, 2016