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2Q0I
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STRUCTURE OF PSEUDOMONAS QUINOLONE SIGNAL RESPONSE PROTEIN PQSE
Descriptor:Quinolone signal response protein, FE (III) ION, BENZOIC ACID
Authors:Yu, S., Jensen, V., Feldmann, I., Haussler, S., Blankenfeldt, W.
Deposit date:2007-05-22
Release date:2008-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
2Q0J
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STRUCTURE OF PSEUDOMONAS QUINOLONE SIGNAL RESPONSE PROTEIN PQSE
Descriptor:Quinolone signal response protein, FE (III) ION, BENZOIC ACID
Authors:Yu, S., Jensen, V., Feldmann, I., Haussler, S., Blankenfeldt, W.
Deposit date:2007-05-22
Release date:2008-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
3DH8
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STRUCTURE OF PSEUDOMONAS QUINOLONE SIGNAL RESPONSE PROTEIN PQSE
Descriptor:Uncharacterized protein PA1000, FE (III) ION, bis(4-nitrophenyl) hydrogen phosphate
Authors:Yu, S., Blankenfeldt, W.
Deposit date:2008-06-17
Release date:2009-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
3K2D
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CRYSTAL STRUCTURE OF IMMUNOGENIC LIPOPROTEIN A FROM VIBRIO VULNIFICUS
Descriptor:ABC-type metal ion transport system, periplasmic component, METHIONINE
Authors:Yu, S., Rhee, S.
Deposit date:2009-09-30
Release date:2010-10-13
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Toll-like receptor 2-activating lipoprotein IIpA from Vibrio vulnificus.
Proteins, 79, 2011
4KL0
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CRYSTAL STRUCTURE OF THE EFFECTOR PROTEIN XOO4466
Descriptor:Putative uncharacterized protein, CALCIUM ION
Authors:Yu, S., Rhee, S.
Deposit date:2013-05-07
Release date:2013-10-09
Last modified:2013-12-11
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal structure of the effector protein XOO4466 from Xanthomonas oryzae
J.Struct.Biol., 184, 2013
4P5F
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THE CRYSTAL STRUCTURE OF TYPE III EFFECTOR PROTEIN XOPQ COMPLEXED WITH ADENOSINE DIPHOSPHATE RIBOSE
Descriptor:Inosine-uridine nucleoside N-ribohydrolase, CALCIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Yu, S., Hwang, I., Rhee, S.
Deposit date:2014-03-17
Release date:2014-08-13
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of type III effector protein XopQ from Xanthomonas oryzae complexed with adenosine diphosphate ribose.
Proteins, 82, 2014
3P2F
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CRYSTAL STRUCTURE OF TOFI IN AN APO FORM
Descriptor:AHL synthase
Authors:Yu, S., Rhee, S.
Deposit date:2010-10-02
Release date:2011-07-06
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Small-molecule inhibitor binding to an N-acyl-homoserine lactone synthase
Proc.Natl.Acad.Sci.USA, 108, 2011
3P2H
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CRYSTAL STRUCTURE OF TOFI IN A TERNARY COMPLEX WITH AN INHIBITOR AND MTA
Descriptor:AHL synthase, 5'-DEOXY-5'-METHYLTHIOADENOSINE, N-(3-oxocyclohex-1-en-1-yl)octanamide
Authors:Yu, S., Rhee, S.
Deposit date:2010-10-02
Release date:2011-07-06
Last modified:2011-08-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Small-molecule inhibitor binding to an N-acyl-homoserine lactone synthase
Proc.Natl.Acad.Sci.USA, 108, 2011
3SK1
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CRYSTAL STRUCTURE OF PHENAZINE RESISTANCE PROTEIN EHPR FROM ENTEROBACTER AGGLOMERANS (ERWINIA HERBICOLA, PANTOEA AGGLOMERANS) EH1087, APO FORM
Descriptor:EhpR
Authors:Blankenfeldt, W., Yu, S.
Deposit date:2011-06-22
Release date:2011-08-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Atomic resolution structure of EhpR: phenazine resistance in Enterobacter agglomerans Eh1087 follows principles of bleomycin / mitomycin C resistance in other bacteria.
Bmc Struct.Biol., 11, 2011
3SK2
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CRYSTAL STRUCTURE OF PHENAZINE RESISTANCE PROTEIN EHPR FROM ENTEROBACTER AGGLOMERANS (ERWINIA HERBICOLA, PANTOEA AGGLOMERANS) EH1087 IN COMPLEX WITH GRISEOLUTEIC ACID
Descriptor:EhpR, 6-formyl-9-methoxyphenazine-1-carboxylic acid
Authors:Blankenfeldt, W., Yu, S.
Deposit date:2011-06-22
Release date:2011-08-31
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Atomic resolution structure of EhpR: phenazine resistance in Enterobacter agglomerans Eh1087 follows principles of bleomycin / mitomycin C resistance in other bacteria.
Bmc Struct.Biol., 11, 2011
2X2H
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CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE
Descriptor:ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ACETATE ION, ...
Authors:Rozeboom, H.J., Yu, S., Madrid, S., Kalk, K.H., Dijkstra, B.W.
Deposit date:2010-01-13
Release date:2011-01-19
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2I
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CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE WITH ACARBOSE
Descriptor:ALPHA-1,4-GLUCAN LYASE ISOZYME 1, BETA-ACARBOSE, GLYCEROL
Authors:Rozeboom, H.J., Yu, S., Madrid, S., Kalk, K.H., Dijkstra, B.W.
Deposit date:2010-01-13
Release date:2011-01-19
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2J
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CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA- 1,4-GLUCAN LYASE WITH DEOXYNOJIRIMYCIN
Descriptor:ALPHA-1,4-GLUCAN LYASE ISOZYME 1, 1-DEOXYNOJIRIMYCIN, GLYCEROL, ...
Authors:Rozeboom, H.J., Yu, S., Madrid, S., Kalk, K.H., Dijkstra, B.W.
Deposit date:2010-01-13
Release date:2011-01-19
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4A7K
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BIFUNCTIONAL ALDOS-2-ULOSE DEHYDRATASE
Descriptor:ALDOS-2-ULOSE DEHYDRATASE, ZINC ION, MAGNESIUM ION, ...
Authors:Claesson, M., Lindqvist, Y., Madrid, S., Sandalova, T., Fiskesund, R., Yu, S., Schneider, G.
Deposit date:2011-11-14
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Bifunctional Aldos-2-Ulose Dehydratase/Isomerase from Phanerochaete Chrysosporium with the Reaction Intermediate Ascopyrone M.
J.Mol.Biol., 417, 2012
4A7Y
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ACTIVE SITE METAL DEPLETED ALDOS-2-ULOSE DEHYDRATASE
Descriptor:ALDOS-2-ULOSE DEHYDRATASE, ZINC ION, MAGNESIUM ION, ...
Authors:Claesson, M., Lindqvist, Y., Madrid, S., Sandalova, T., Fiskesund, R., Yu, S., Schneider, G.
Deposit date:2011-11-15
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Bifunctional Aldos-2-Ulose Dehydratase/Isomerase from Phanerochaete Chrysosporium with the Reaction Intermediate Ascopyrone M.
J.Mol.Biol., 417, 2012
4A7Z
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COMPLEX OF BIFUNCTIONAL ALDOS-2-ULOSE DEHYDRATASE WITH THE REACTION INTERMEDIATE ASCOPYRONE M
Descriptor:ALDOS-2-ULOSE DEHYDRATASE, ZINC ION, MAGNESIUM ION, ...
Authors:Claesson, M., Lindqvist, Y., Madrid, S., Sandalova, T., Fiskesund, R., Yu, S., Schneider, G.
Deposit date:2011-11-15
Release date:2012-03-21
Last modified:2013-01-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Bifunctional Aldos-2-Ulose Dehydratase/Isomerase from Phanerochaete Chrysosporium with the Reaction Intermediate Ascopyrone M.
J.Mol.Biol., 417, 2012
4AMW
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CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE COVALENT INTERMEDIATE COMPLEX WITH 5-FLUORO-IDOSYL- FLUORIDE
Descriptor:ALPHA-1,4-GLUCAN LYASE ISOZYME 1, (2R,3R,4R,5S,6R)-6-fluoranyl-6-(hydroxymethyl)oxane-2,3,4,5-tetrol, GLYCEROL, ...
Authors:Rozeboom, H.J., Yu, S., Madrid, S., Kalk, K.H., Dijkstra, B.W.
Deposit date:2012-03-14
Release date:2013-03-27
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4AMX
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CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE COVALENT INTERMEDIATE COMPLEX WITH 5-FLUORO-GLUCOSYL- FLUORIDE
Descriptor:ALPHA-1,4-GLUCAN LYASE ISOZYME 1, 5-FLUORO-BETA-D-GLUCOPYRANOSE, GLYCEROL, ...
Authors:Rozeboom, H.J., Yu, S., Madrid, S., Kalk, K.H., Dijkstra, B.W.
Deposit date:2012-03-14
Release date:2013-03-27
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
3DSS
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CRYSTAL STRUCTURE OF RABGGTASE(DELTA LRR; DELTA IG)
Descriptor:Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ZINC ION, ...
Authors:Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3DST
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CRYSTAL STRUCTURE OF RABGGTASE(DELTA LRR; DELTA IG)IN COMPLEX WITH GERANYLGERANYL PYROPHOSPHATE
Descriptor:Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, GERANYLGERANYL DIPHOSPHATE, ...
Authors:Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3DSU
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CRYSTAL STRUCTURE OF RABGGTASE(DELTA LRR; DELTA IG)IN COMPLEX WITH FARNESYL PYROPHOSPHATE
Descriptor:Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, FARNESYL DIPHOSPHATE, ...
Authors:Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3DSV
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CRYSTAL STRUCTURE OF RABGGTASE(DELTA LRR; DELTA IG)IN COMPLEX WITH MONO-PRENYLATED PEPTIDE SER-CYS-SER-CYS(GG) DERIVATED FROM RAB7
Descriptor:Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ZINC ION, ...
Authors:Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3DSW
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CRYSTAL STRUCTURE OF RABGGTASE(DELTA LRR; DELTA IG)IN COMPLEX WITH MONO-PRENYLATED PEPTIDE SER-CYS(GG)-SER-CYS DERIVATED FROM RAB7
Descriptor:Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ZINC ION, ...
Authors:Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3DSX
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CRYSTAL STRUCTURE OF RABGGTASE(DELTA LRR; DELTA IG)IN COMPLEX WITH DI-PRENYLATED PEPTIDE SER-CYS(GG)-SER-CYS(GG) DERIVATED FROM RAB7
Descriptor:Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ZINC ION, ...
Authors:Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3FWE
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CRYSTAL STRUCTURE OF THE APO D138L CAP MUTANT
Descriptor:Catabolite gene activator, PROLINE
Authors:Sharma, H., Wang, J., Kong, J., Yu, S., Steitz, T.
Deposit date:2009-01-17
Release date:2009-09-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding
Proc.Natl.Acad.Sci.USA, 106, 2009
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