Author results

3BD9
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HUMAN 3-O-SULFOTRANSFERASE ISOFORM 5 WITH BOUND PAP
分子名称:Heparan sulfate glucosamine 3-O-sulfotransferase 5, ADENOSINE-3'-5'-DIPHOSPHATE
著者Xu, D., Moon, A.F., Song, D., Liu, J., Pedersen, L.C.
登録日2007-11-14
公開日2008-01-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering sulfotransferases to modify heparan sulfate.
Nat.Chem.Biol., 4, 2008
4IM8
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LOW RESOLUTION CRYSTAL STRUCTURE OF MOUSE RAGE
分子名称:Advanced glycation end-products receptor
著者Xu, D., Young, J.H., Krahn, J.M., Song, D., Corbett, K.D., Chazin, W.J., Pedersen, L.C., Esko, J.D.
登録日2013-01-02
公開日2013-08-14
最終更新日2014-02-26
実験手法X-RAY DIFFRACTION (3.503 Å)
主引用文献Stable RAGE-Heparan Sulfate Complexes Are Essential for Signal Transduction.
Acs Chem.Biol., 8, 2013
1NWB
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SOLUTION NMR STRUCTURE OF PROTEIN AQ_1857 FROM AQUIFEX AEOLICUS: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET QR6.
分子名称:Hypothetical protein AQ_1857
著者Xu, D., Liu, G., Xiao, R., Acton, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2003-02-05
公開日2003-06-03
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献NMR structure of the hypothetical protein AQ-1857 encoded by the Y157 gene from Aquifex aeolicus reveals a novel protein fold.
Proteins, 54, 2004
5GWD
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STRUCTURE OF MYROILYSIN
分子名称:Myroilysin, ZINC ION
著者Xu, D., Ran, T., Wang, W.
登録日2016-09-10
公開日2017-02-15
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Myroilysin Is a New Bacterial Member of the M12A Family of Metzincin Metallopeptidases and Is Activated by a Cysteine Switch Mechanism.
J. Biol. Chem., 292, 2017
5CZW
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CRYSTAL STRUCTURE OF MYROILYSIN
分子名称:Myroilysin, ZINC ION
著者Zhou, J., Ran, T., Xu, D., Wang, W.
登録日2015-08-01
公開日2016-08-03
最終更新日2017-04-26
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Myroilysin is a New Bacterial Member of the M12A Family of Metzincin Metallopeptidases and Activated by a Cysteine-switch Mechanism
J. Biol. Chem., 292, 2017
5GP7
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STRUCTURAL BASIS FOR THE BINDING BETWEEN TANKYRASE-1 AND USP25
分子名称:Tankyrase-1, Ubiquitin carboxyl-terminal hydrolase 25, GLYCEROL
著者Liu, J., Xu, D., Fu, T., Pan, L.
登録日2016-08-01
公開日2017-07-12
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献USP25 regulates Wnt signaling by controlling the stability of tankyrases
Genes Dev., 31, 2017
5Y0E
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CRYSTAL STRUCTURE OF TSSK
分子名称:TssK, SULFATE ION
著者Tong, H., Xu, D., Ran, T., Wang, W.W.
登録日2017-07-17
公開日2018-08-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of TssK at 2.5 Angstroms resolution.
To Be Published
3S1S
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CHARACTERIZATION AND CRYSTAL STRUCTURE OF THE TYPE IIG RESTRICTION ENDONUCLEASE BPUSI
分子名称:restriction endonuclease BpuSI, S-ADENOSYL-L-HOMOCYSTEINE, 1,2-ETHANEDIOL, ...
著者Shen, B.W., Xu, D., Chan, S.-H., Zheng, Y., Zhu, Y., Xu, S.-Y., Stoddard, B.L.
登録日2011-05-16
公開日2011-07-13
最終更新日2011-10-19
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI.
Nucleic Acids Res., 39, 2011
5XNB
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CRYSTAL STRUCTURE OF THE ICMS-ICMW-DOTL COMPLEX OF THE LEGIONELLA TYPE IVB SECRETION SYSTEM
分子名称:DotL, IcmS protein, IcmW, ...
著者Xu, J., Xu, D., Zhu, Y.
登録日2017-05-19
公開日2017-09-27
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献Crystal Structure of The IcmS-IcmW Complex in the Legionella Type IVb Secretion System
To Be Published
2JPU
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SOLUTION STRUCTURE OF NESG TARGET SSR10, ORF C02003 PROTEIN
分子名称:Orf c02003 protein
著者Wu, Y., Singarapu, K.K., Zhang, Q., Eletski, A., Xu, D., Sukumaran, D., Parish, D., Wang, D., Jiang, M., Cunningham, K., Maglaqui, M., Owens, L., Xiao, R., Liu, J., Baran, M., Swapna, G.V.T., Acton, T., Rost, B., Montelione, G., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2007-05-23
公開日2007-07-03
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of NESG target SsR10, Orf c02003 protein
To be Published
2HG7
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SOLUTION NMR STRUCTURE OF PHAGE-LIKE ELEMENT PBSX PROTEIN XKDW, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR355
分子名称:Phage-like element PBSX protein xkdW
著者Liu, G., Parish, D., Xu, D., Atreya, H., Sukumaran, D., Ho, C.K., Jiang, M., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Swapna, G.V., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2006-06-26
公開日2006-08-22
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution NMR structure of Phage-like element PBSX protein xkdW, Northeast Structural Genomics Consortium Target SR355
TO BE PUBLISHED
2JVM
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SOLUTION NMR STRUCTURE OF RHODOBACTER SPHAEROIDES PROTEIN RHOS4_26430. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET RHR95
分子名称:Uncharacterized protein
著者Eletsky, A., Sukumaran, D., Zhang, Q., Parish, D., Xu, D., Wang, H., Janjua, H., Owens, L., Xiao, R., Liu, J., Baran, M.C., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2007-09-21
公開日2007-10-16
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of Rhodobacter sphaeroides protein RHOS4_26430.
To be Published
2HFI
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SOLUTION NMR STRUCTURE OF PROTEIN YPPE FROM BACILLUS SUBTILIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR213
分子名称:Hypothetical protein yppE
著者Liu, G., Singarapu, K.K., Parish, D., Eletsky, A., Xu, D., Sukumaran, D., Ho, C.K., Fang, Y., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2006-06-23
公開日2006-07-25
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution NMR structure of hypothetical protein yppE: Northeast Structural Genomics Consortium Target SR213
TO BE PUBLISHED
1PUZ
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SOLUTION NMR STRUCTURE OF PROTEIN NMA1147 FROM NEISSERIA MENINGITIDIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MR19
分子名称:conserved hypothetical protein
著者Liu, G., Xu, D., Sukumaran, D.K., Chiang, Y., Acton, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2003-06-25
公開日2004-06-29
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献NMR structure of the hypothetical protein NMA1147 from Neisseria meningitidis reveals a distinct 5-helix bundle.
Proteins, 55, 2004
2GZO
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NMR STRUCTURE OF UPF0301 PROTEIN SO3346 FROM SHEWANELLA ONEIDENSIS: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SOR39
分子名称:UPF0301 protein SO3346
著者Singarapu, K.K., Liu, G., Eletsky, A., Xu, D., Sukumaran, D.K., Mei, J., Xiao, R., Cunningham, K., Ma, L.C., Ritu, S., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2006-05-11
公開日2006-06-20
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献NMR structure of UPF0301 PROTEIN SO3346 from Shewanella oneidensis: Northeast Structural Genomics Consortium target SOR39
To be Published
2HI6
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SOLUTION NMR STRUCTURE OF UPF0107 PROTEIN AF_0055, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET GR101
分子名称:UPF0107 protein AF0055
著者Liu, G., Atreya, H., Xu, D., Sukumaran, D.K., Chen, C.X., Janjua, H., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
登録日2006-06-29
公開日2006-08-29
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution NMR structure of UPF0107 protein AF_0055, Northeast Structural Genomics Consortium Target GR101 (CASP Target)
To be Published
2K71
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STRUCTURE AND DYNAMICS OF A DNA GNRA HAIRPIN SOLVED VY HIGH-SENSITIVITY NMR WITH TWO INDEPENDENT CONVERGING METHODS, SIMULATED ANNEALING (DYANA) AND MESOSCOPIC MOLECULAR MODELLING (BCE/AMBER)
分子名称:5'-D(*DGP*DCP*DGP*DAP*DAP*DAP*DGP*DC)-3'
著者Santini, G.P.H., Cognet, J.A.H., Xu, D., Singarapu, K.K., Herve du Penhoat, C.L.M.
登録日2008-07-29
公開日2009-07-21
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Nucleic acid folding determined by mesoscale modeling and NMR spectroscopy: solution structure of d(GCGAAAGC).
J.Phys.Chem.B, 113, 2009
3F5F
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CRYSTAL STRUCTURE OF HEPARAN SULFATE 2-O-SULFOTRANSFERASE FROM GALLUS GALLUS AS A MALTOSE BINDING PROTEIN FUSION.
分子名称:Maltose-binding periplasmic protein, Heparan sulfate 2-O-sulfotransferase 1, ALPHA-D-GLUCOSE, ...
著者Bethea, H.N., Xu, D., Liu, J., Pedersen, L.C.
登録日2008-11-03
公開日2008-12-16
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Redirecting the substrate specificity of heparan sulfate 2-O-sulfotransferase by structurally guided mutagenesis.
Proc.Natl.Acad.Sci.USA, 105, 2008
3MXN
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CRYSTAL STRUCTURE OF THE RMI CORE COMPLEX
分子名称:RecQ-mediated genome instability protein 1, RecQ-mediated genome instability protein 2, BENZAMIDINE
著者Hoadley, K.A., Xu, D., Xue, Y., Satyshur, K.A., Wang, W., Keck, J.L.
登録日2010-05-07
公開日2010-09-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure and cellular roles of the RMI core complex from the bloom syndrome dissolvasome.
Structure, 18, 2010
4I35
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THE CRYSTAL STRUCTURE OF SERRALYSIN
分子名称:Serralysin, GLYCEROL, HEXANE, ...
著者Zou, M., Ran, T., Xu, D., Wang, W.
登録日2012-11-24
公開日2013-11-27
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献The crystal structure of serralysin
To be Published
4WJA
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CRYSTAL STRUCTURE OF PAXX
分子名称:Uncharacterized protein C9orf142
著者Xing, M., Yang, M., Huo, W., Feng, F., Wei, L., Ning, S., Yan, Z., Li, W., Wang, Q., Hou, M., Dong, C., Guo, R., Gao, G., Ji, J., Lan, L., Liang, H., Xu, D.
登録日2014-09-29
公開日2015-03-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Interactome analysis identifies a new paralogue of XRCC4 in non-homologous end joining DNA repair pathway.
Nat Commun, 6, 2015
5CIO
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CRYSTAL STRUCTURE OF PQQF
分子名称:pyrroloquinoline quinone biosynthesis protein PqqF, ZINC ION
著者Wei, Q., Xu, D., Ran, T., Wang, W.
登録日2015-07-13
公開日2016-06-08
最終更新日2016-08-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure and Function of PqqF Protein in the Pyrroloquinoline Quinone Biosynthetic Pathway
J.Biol.Chem., 291, 2016
5GXT
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CRYSTAL STRUCTURE OF PIGG
分子名称:Maltose-binding periplasmic protein,PigG, MAGNESIUM ION
著者Zhang, F., Ran, T., Xu, D., Wang, W.
登録日2016-09-20
公開日2017-07-19
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.245 Å)
主引用文献Crystal structure of MBP-PigG fusion protein and the essential function of PigG in the prodigiosin biosynthetic pathway in Serratia marcescens FS14.
Int. J. Biol. Macromol., 99, 2017
5GXV
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CRYSTAL STRUCTURE OF PIGG
分子名称:Maltose-binding periplasmic protein,PigG, MAGNESIUM ION
著者Zhang, F., Ran, T., Xu, D., Wang, W.
登録日2016-09-20
公開日2017-07-19
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of MBP-PigG fusion protein and the essential function of PigG in the prodigiosin biosynthetic pathway in Serratia marcescens FS14.
Int. J. Biol. Macromol., 99, 2017
5WVM
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CRYSTAL STRUCTURE OF BAES COCRYSTALLIZED WITH 2 MM INDOLE
分子名称:Maltose-binding periplasmic protein,Two-component system sensor kinase, SULFATE ION
著者Wang, W., Zhang, Y., Rang, T., Xu, D.
登録日2016-12-26
公開日2018-01-03
最終更新日2019-01-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the sensor domain of BaeS from Serratia marcescens FS14
Proteins, 85, 2017
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