Author results

1WS7
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CRYSTAL STRUCTURE OF MAVICYANIN FROM CUCURBITA PEPO MEDULLOSA (ZUCCHINI)
Descriptor:Mavicyanin, COPPER (I) ION
Authors:Xie, Y., Inoue, T., Miyamoto, Y., Matsumura, H., Kataoka, K., Yamaguchi, K., Nojini, M., Suzuki, S., Kai, Y.
Deposit date:2004-11-02
Release date:2004-11-23
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural reorganization of the copper binding site involving Thr15 of mavicyanin from Cucurbita pepo medullosa (zucchini) upon reduction.
J.Biochem.(Tokyo), 137, 2005
1WS8
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CRYSTAL STRUCTURE OF MAVICYANIN FROM CUCURBITA PEPO MEDULLOSA (ZUCCHINI)
Descriptor:mavicyanin, COPPER (II) ION, GLYCEROL
Authors:Xie, Y., Inoue, T., Miyamoto, Y., Matsumura, H., Kunishige, K., Yamaguchi, K., Nojini, M., Suzuki, S., Kai, Y.
Deposit date:2004-11-02
Release date:2004-11-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural reorganization of the copper binding site involving Thr15 of mavicyanin from Cucurbita pepo medullosa (zucchini) upon reduction.
J.Biochem.(Tokyo), 137, 2005
6E5U
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CRYSTAL STRUCTURE OF THE MRNA EXPORT RECEPTOR NXF1/NXT1 IN COMPLEX WITH INFLUENZA VIRUS NS1 PROTEIN
Descriptor:Nuclear RNA export factor 1, NTF2-related export protein 1, Non-structural protein 1
Authors:Xie, Y., Ren, Y.
Deposit date:2018-07-23
Release date:2019-04-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of the mRNA export receptor NXF1/NXT1 in complex with influenza virus NS1 protein
To Be Published
5ZYP
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STRUCTURE OF THE YEAST CTR9/PAF1 COMPLEX
Descriptor:RNA polymerase-associated protein CTR9,RNA polymerase II-associated protein 1, NICKEL (II) ION
Authors:Xie, Y., Zheng, M., Zhou, H., Long, J.
Deposit date:2018-05-28
Release date:2018-09-26
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (2.532 Å)
Cite:Paf1 and Ctr9 subcomplex formation is essential for Paf1 complex assembly and functional regulation.
Nat Commun, 9, 2018
5ZYQ
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THE STRUCTURE OF HUMAN PAF1/CTR9 COMPLEX
Descriptor:RNA polymerase-associated protein CTR9 homolog,RNA polymerase II-associated factor 1 homolog
Authors:Xie, Y., Zheng, M., Zhou, H., Long, J.
Deposit date:2018-05-28
Release date:2018-09-26
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (2.531 Å)
Cite:Paf1 and Ctr9 subcomplex formation is essential for Paf1 complex assembly and functional regulation.
Nat Commun, 9, 2018
2D7U
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CRYSTAL STRUCTURE OF HYPOTHETICAL ADENYLOSUCCINATE SYNTHETASE, PH0438 FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:Adenylosuccinate synthetase
Authors:Xie, Y., Kishisita, S., Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-11-29
Release date:2006-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of hypothetical adenylosuccinate synthetase, PH0438 from Pyrococcus horikoshii OT3
To be Published
2DST
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CRYSTAL STRUCTURE ANALYSIS OF TT1977
Descriptor:Hypothetical protein TTHA1544
Authors:Xie, Y., Kishishita, S., Murayama, K., Shirouzu, M., Chen, L., Liu, Z.J., Wang, B.C., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-06
Release date:2007-01-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the minimized alpha/beta-hydrolase fold protein from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 63, 2007
2E7V
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CRYSTAL STRUCTURE OF SEA DOMAIN OF TRANSMEMBRANE PROTEASE FROM MUS MUSCULUS
Descriptor:Transmembrane protease
Authors:Xie, Y., Kishishita, S., Murayama, K., Hori-Takemoto, C., Shirozu, M., Yokoyama, S., Chen, L., Liu, Z.J., Wang, B.C., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-15
Release date:2007-07-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of SEA domain of transmembrane protease from Mus musculus
To be Published
2EAQ
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CRYSTAL STRUCTURE OF PDZ DOMAIN OF KIAA0858 (LIM), MS0793 FROM HOMO SAPIENS
Descriptor:LIM domain only protein 7, NICKEL (II) ION
Authors:Xie, Y., Kishishita, S., Murayama, K., Takemoto, C., Shirozu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-31
Release date:2007-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal structure of PDZ domain of KIAA0858 (LIM), MS0793 from Homo sapiens
To be Published
2YVQ
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CRYSTAL STRUCTURE OF MGS DOMAIN OF CARBAMOYL-PHOSPHATE SYNTHETASE FROM HOMO SAPIENS
Descriptor:Carbamoyl-phosphate synthase
Authors:Xie, Y., Ihsanawati, Kishishita, S., Murayama, K., Takemoto, C., Shirozu, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of MGS domain of carbamoyl-phosphate synthetase from homo sapiens
To be Published
2YY0
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CRYSTAL STRUCTURE OF MS0802, C-MYC-1 BINDING PROTEIN DOMAIN FROM HOMO SAPIENS
Descriptor:C-Myc-binding protein
Authors:Xie, Y., Wang, H., Ihsanawati, Kishishita, S., Takemoto, C., Shirozu, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2008-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:crystal structure of c-Myc-1 binding protein domain from Homo sapiens
To be Published
2Z1B
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CRYSTAL STRUCTURE OF 5-AMINOLEVULINIC ACID DEHYDRATASE (ALAD) FROM MUS MUSCULS
Descriptor:Delta-aminolevulinic acid dehydratase
Authors:Xie, Y., Wang, H., Kawazoe, M., Kishishita, S., Murayama, K., Takemoto, C., Terada, T., Shirozu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculs
To be Published
4ILE
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STRUCTURE OF HUMAN ADP-RIBOSYLATION FACTOR-LIKE 8A BINDING TO GDP
Descriptor:ADP-ribosylation factor-like protein 8A, GUANOSINE-5'-DIPHOSPHATE
Authors:Xie, Y., Ren, J., Cheng, Z., Qian, H.
Deposit date:2012-12-31
Release date:2014-01-01
Method:X-RAY DIFFRACTION (2.676 Å)
Cite:Structure of human ADP-ribosylation factor-like 8A binding to GDP
To be Published
5HTJ
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PUTATIVE SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942-D8A
Descriptor:Probable sugar kinase
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-26
Release date:2016-06-08
Last modified:2016-06-15
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HTN
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PUTATIVE SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942-APO FORM
Descriptor:Probable sugar kinase
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HTP
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PUTATIVE SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942 IN COMPLEX WITH AMPPNP
Descriptor:Probable sugar kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HTR
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PUTATIVE SUGAR KINASES FROM ARABIDOPSIS THALIANA IN APO FORM
Descriptor:Putative xylulose kinase
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2016-06-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HTV
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PUTATIVE SUGAR KINASES FROM ARABIDOPSIS THALIANA IN COMPLEX WITH AMPPNP
Descriptor:Putative xylulose kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HTX
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PUTATIVE SUGAR KINASES FROM ARABIDOPSIS THALIANA IN COMPLEX WITH ADP
Descriptor:Putative xylulose kinase, ADENOSINE-5'-DIPHOSPHATE
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2016-06-15
Method:X-RAY DIFFRACTION (1.492 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HTY
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SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942-D221A
Descriptor:Probable sugar kinase
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2016-06-15
Method:X-RAY DIFFRACTION (2.815 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HU2
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SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942-T11A
Descriptor:Probable sugar kinase
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HUX
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PUTATIVE SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942 IN COMPLEX WITH ADP
Descriptor:Probable sugar kinase, ADENOSINE-5'-DIPHOSPHATE
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HV7
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PUTATIVE SUGAR KINASES FROM SYNECHOCOCCUS ELONGATUS PCC7942 IN COMPLEX WITH D-RIBULOSE
Descriptor:Probable sugar kinase, D-ribulose
Authors:Xie, Y., Li, M., Chang, W.
Deposit date:2016-01-28
Release date:2016-06-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5K7X
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FULLY LIGATED ADENYLOSUCCINATE SYNTHETASE FROM PYROCOCCUS HORIKOSHII OT3 WITH GTP, IMP AND HADACIDIN
Descriptor:Adenylosuccinate synthetase, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Xie, Y., Cheng, Z.
Deposit date:2016-05-27
Release date:2016-12-07
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Crystal structure of hypothetical adenylosuccinate synthetase, PH0438 from Pyrococcus horikoshii OT3
To Be Published
4K5Q
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CRYSTAL STRUCTURE OF CALB MUTANT DGLM FROM CANDIDA ANTARCTICA
Descriptor:Lipase B
Authors:An, J., Xie, Y., Feng, Y., Wu, G.
Deposit date:2013-04-15
Release date:2014-01-29
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Enhanced enzyme kinetic stability by increasing rigidity within the active site.
J.Biol.Chem., 289, 2014