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214D
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BU of 214d by Molmil
THE SOLUTION STRUCTURE OF A DNA DUPLEX CONTAINING A SINGLE 2'-O-METHYL-BETA-D-ARAT
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*AP*(T41)P*AP*TP*GP*CP*G)-3')
Authors:Gotfredsen, C.H, Spielmann, H.P, Wengel, J, Jacobsen, J.P.
Deposit date:1995-07-07
Release date:1995-10-15
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure of a DNA duplex containing a single 2'-O-methyl-beta-D-araT: combined use of NMR, restrained molecular dynamics, and full relaxation matrix refinement.
Bioconjug.Chem., 7, 1996
1OCI
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BU of 1oci by Molmil
[3.2.0]bcANA:DNA
Descriptor: 5'-D(*CP*TP*GP*A TLBP*AP*TP*GP*CP)-3', 5'-D(*GP*CP*AP*TP*AP*TP*CP*AP*GP)-3'
Authors:Tommerholt, H.V, Christensen, N.K, Nielsen, P, Wengel, J, Stein, P.C, Jacobsen, J.P, Petersen, M.
Deposit date:2003-02-07
Release date:2003-07-14
Last modified:2018-01-17
Method:SOLUTION NMR
Cite:NMR Solution Structure of a DsDNA Containing a Bicyclic D-Arabino-Configured Nucleotide Fixed in an O4'-Endo Sugar Conformation
Org.Biomol.Chem., 1, 2003
1HG9
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BU of 1hg9 by Molmil
Solution structure of DNA:RNA hybrid
Descriptor: 5- D(*CP*TP*GP*AP*TP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-13
Release date:2002-01-02
Last modified:2019-10-09
Method:SOLUTION NMR
Cite:Structural studies of LNA:RNA duplexes by NMR: conformations and implications for RNase H activity.
Chemistry, 6, 2000
1H0Q
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BU of 1h0q by Molmil
NMR solution structure of a fully modified locked nucleic acid (LNA) hybridized to RNA
Descriptor: 5-D(*(LKC)P*(TLN)P*(LCG)P*(LCA)P*(TLN)P*(LCA)P* (TLN)P*(LCG)P*(LCC))-3, 5-R(*GP*CP*AP*UP*AP*UP*CP*AP*G)-3
Authors:Rasmussen, J, Petersen, M, Nielsen, K.E, Kumar, R, Wengel, J, Jacobsen, J.P.
Deposit date:2002-06-27
Release date:2003-07-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR Studies of Fully Modified Locked Nucleic Acid (Lna) Hybrids: Solution Structure of an Lna:RNA Hybrid and Characterization of an Lna:RNA Hybrid
Bioconjug.Chem., 15, 2004
1EI4
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BU of 1ei4 by Molmil
B-DNA DODECAMER CGCGAAT(TLC)CGCG WITH INCORPORATED [3.3.0]BICYCLO-ARABINO-THYMINE-5'-PHOSPHATE
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TLC)P*(TLC)P*CP*GP*CP*G)-3'), MAGNESIUM ION, SPERMINE
Authors:Minasov, G, Teplova, M, Nielsen, P, Wengel, J, Egli, M.
Deposit date:2000-02-24
Release date:2000-03-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural basis of cleavage by RNase H of hybrids of arabinonucleic acids and RNA.
Biochemistry, 39, 2000
1HHW
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BU of 1hhw by Molmil
Solution structure of LNA1:RNA hybrid
Descriptor: 5- D(*CP*TP*GP*AP*+TLNP*AP*TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-29
Release date:2002-05-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
1HHX
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BU of 1hhx by Molmil
Solution structure of LNA3:RNA hybrid
Descriptor: 5- D(*CP*+TP*GP*AP*+TP*AP*+TP*GP*C) -3, 5- R(*GP*CP*AP*UP*AP*UP*CP*AP*G) -3
Authors:Petersen, M, Bondensgaard, K, Wengel, J, Jacobsen, J.P.
Deposit date:2000-12-29
Release date:2002-05-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Locked Nucleic Acid (Lna) Recognition of RNA: NMR Solution Structures of Lna:RNA Hybrids
J.Am.Chem.Soc., 124, 2002
1GV6
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BU of 1gv6 by Molmil
Solution structure of alfa-L-LNA:DNA duplex
Descriptor: 5- D(*CP*(ATL)P*GP*CP*(ATL)P*(ATL)P*CP*(ATL)P* GP*C) -3, 5- D(*GP*CP*AP*GP*AP*AP*GP*CP*AP*G) -3
Authors:Nielsen, K.M.E, Petersen, M, Haakansson, A.E, Wengel, J, Jacobsen, J.P.
Deposit date:2002-02-06
Release date:2002-07-05
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Alfa-L-Lna (Alfa-L-Ribo Configured Locked Nucleic Acid) Recognition of DNA: An NMR Spectroscopic Study
Chemistry, 8, 2002
1I5W
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BU of 1i5w by Molmil
A-DNA DECAMER GCGTA(TLN)ACGC
Descriptor: 5'-D(*GP*CP*GP*TP*AP*(TLN)P*AP*CP*GP*C)-3'
Authors:Egli, M, Minasov, G, Teplova, M, Kumar, R, Wengel, J.
Deposit date:2001-03-01
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray crystal structure of a locked nucleic acid (LNA) duplex composed of a palindromic 10-mer DNA strand containing one LNA thymine monomer
J.Chem.Soc.,Chem.Commun., 2001
2M53
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BU of 2m53 by Molmil
G-rich VEGF aptamer with LNA modifications
Descriptor: G-rich VEGF aptamer
Authors:Marusic, M, Veedu, R.N, Plavec, J.
Deposit date:2013-02-13
Release date:2013-08-28
Last modified:2022-08-24
Method:SOLUTION NMR
Cite:G-rich VEGF aptamer with locked and unlocked nucleic acid modifications exhibits a unique G-quadruplex fold.
Nucleic Acids Res., 41, 2013

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