Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4QCD
DownloadVisualize
BU of 4qcd by Molmil
Neutron crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha at room temperature.
Descriptor: BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase, trideuteriooxidanium
Authors:Unno, M, Ishikawa-Suto, K, Ishihara, M, Hagiwara, Y, Sugishima, M, Wada, K, Fukuyama, K.
Deposit date:2014-05-10
Release date:2015-04-29
Last modified:2024-03-20
Method:NEUTRON DIFFRACTION (1.932 Å), X-RAY DIFFRACTION
Cite:Insights into the Proton Transfer Mechanism of a Bilin Reductase PcyA Following Neutron Crystallography.
J. Am. Chem. Soc., 137, 2015
3QXM
DownloadVisualize
BU of 3qxm by Molmil
Crystal Structure of Human GluK2 Ligand-Binding Core in Complex with Novel Marine-Derived Toxins, Neodysiherbaine A
Descriptor: (2R,3aR,6R,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6,7-dihydroxyhexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid, Glutamate receptor ionotropic, kainate 2
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2011-03-02
Release date:2011-10-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
3FUZ
DownloadVisualize
BU of 3fuz by Molmil
Crystal structure of the human glutamate receptor, GluR5, ligand-binding core in complex with L-glutamate in space group P1
Descriptor: GLUTAMIC ACID, Glutamate receptor, ionotropic kainate 1, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-15
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
3FVK
DownloadVisualize
BU of 3fvk by Molmil
Crystal structure of the human glutamate receptor, GluR5, ligand-binding core in complex with 8-deoxy-neodysiherbaine A in space group P1
Descriptor: (2R,3aR,6S,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-6-hydroxy-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, GLYCEROL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-15
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
3FVO
DownloadVisualize
BU of 3fvo by Molmil
Crystal structure of the human glutamate receptor, GluR5, ligand-binding core in complex with 8-epi-neodysiherbaine A in space group P1
Descriptor: (2R,3aR,6R,7S,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-6,7-dihydroxy-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, GLYCEROL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-16
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of Human GluR5 Ligand-Binding Core in Complexes with Novel Marine-Derived Toxins, Dysiherbaine and Neodysiherbaine A, and Their Analogues
To be Published
3FVN
DownloadVisualize
BU of 3fvn by Molmil
Crystal structure of the human glutamate receptor, GluR5, ligand-binding core in complex with 9-deoxy-neodysiherbaine A in space group P1
Descriptor: (2R,3aR,7R,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-7-hydroxy-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, GLYCEROL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-16
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
3FV2
DownloadVisualize
BU of 3fv2 by Molmil
Crystal structure of the human glutamate receptor, GluR5, ligand-binding core in complex with neodysiherbaine A in space group P1
Descriptor: (2R,3aR,6R,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6,7-dihydroxyhexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid, GLYCEROL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-15
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
3FV1
DownloadVisualize
BU of 3fv1 by Molmil
Crystal Structure of the human glutamate receptor, GluR5, ligand-binding core in complex with dysiherbaine in space group P1
Descriptor: (2R,3aR,6S,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6-hydroxy-7-(methylamino)hexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid, GLYCEROL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-15
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
3FVG
DownloadVisualize
BU of 3fvg by Molmil
Crystal structure of the human glutamate receptor, GluR5, ligand-binding core in complex with MSVIII-19 in space group P1
Descriptor: (2R,3aR,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, GLYCEROL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2009-01-15
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
4GPH
DownloadVisualize
BU of 4gph by Molmil
Structure of HmuO, heme oxygenase from Corynebacterium diphtheriae, in complex with the putative reaction intermediates between Fe3+-biliverdin and biliverdin (data set IV)
Descriptor: ASCORBIC ACID, BILIVERDINE IX ALPHA, FE (III) ION, ...
Authors:Unno, M, Ikeda-Saito, M.
Deposit date:2012-08-21
Release date:2013-08-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of the Substrate-Free and the Product-Bound forms of HmuO, a Heme Oxygenase from Corynebacterium diphtheriae
To be Published
4GPC
DownloadVisualize
BU of 4gpc by Molmil
Structure of the biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae
Descriptor: ASCORBIC ACID, BILIVERDINE IX ALPHA, Heme oxygenase, ...
Authors:Unno, M, Ikeda-Saito, M.
Deposit date:2012-08-20
Release date:2013-08-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of the Substrate-Free and the Product-Bound forms of HmuO, a Heme Oxygenase from Corynebacterium diphtheriae
To be Published
4GOH
DownloadVisualize
BU of 4goh by Molmil
Structure of the substrate-free HmuO, HO from Corynebacterium diphtheriae
Descriptor: GLYCEROL, Heme oxygenase, SODIUM ION
Authors:Unno, M, Ikeda-Saito, M.
Deposit date:2012-08-20
Release date:2013-08-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Substrate-Free and the Product-Bound forms of HmuO, a Heme Oxygenase from Corynebacterium diphtheriae
To be Published
4GPF
DownloadVisualize
BU of 4gpf by Molmil
Structure of the Fe3+-biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae (data set III)
Descriptor: BILIVERDINE IX ALPHA, FE (III) ION, Heme oxygenase, ...
Authors:Unno, M, Ikeda-Saito, M.
Deposit date:2012-08-20
Release date:2013-08-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Substrate-Free and the Product-Bound forms of HmuO, a Heme Oxygenase from Corynebacterium diphtheriae
To be Published
1V8X
DownloadVisualize
BU of 1v8x by Molmil
Crystal Structure of the Dioxygen-bound Heme Oxygenase from Corynebacterium diphtheriae
Descriptor: Heme oxygenase, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Unno, M, Matsui, T, Chu, G.C, Couture, M, Yoshida, T, Rousseau, D.L, Olson, J.S, Ikeda-Saito, M.
Deposit date:2004-01-15
Release date:2004-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Dioxygen-bound Heme Oxygenase from Corynebacterium diphtheriae: IMPLICATIONS FOR HEME OXYGENASE FUNCTION.
J.Biol.Chem., 279, 2004
1IRU
DownloadVisualize
BU of 1iru by Molmil
Crystal Structure of the mammalian 20S proteasome at 2.75 A resolution
Descriptor: 20S proteasome, MAGNESIUM ION
Authors:Unno, M, Mizushima, T, Morimoto, Y, Tomisugi, Y, Tanaka, K, Yasuoka, N, Tsukihara, T.
Deposit date:2001-10-24
Release date:2002-05-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structure of the mammalian 20S proteasome at 2.75 A resolution.
Structure, 10, 2002
3NSI
DownloadVisualize
BU of 3nsi by Molmil
Crystal Structure of the Post-Refolded S100A3 Protein Expressed in Insect Cell
Descriptor: Protein S100-A3
Authors:Unno, M, Takahara, H, Kizawa, K.
Deposit date:2010-07-01
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Refined crystal structures of human Ca(2+)/Zn(2+)-binding S100A3 protein characterized by two disulfide bridges
J.Mol.Biol., 408, 2011
3NSK
DownloadVisualize
BU of 3nsk by Molmil
Crystal Structure of the Post-Refolded S100A3 R51A Mutant Expressed in Insect Cell
Descriptor: Protein S100-A3
Authors:Unno, M, Takahara, H, Kizawa, K.
Deposit date:2010-07-01
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Refined crystal structures of human Ca(2+)/Zn(2+)-binding S100A3 protein characterized by two disulfide bridges
J.Mol.Biol., 408, 2011
3NSL
DownloadVisualize
BU of 3nsl by Molmil
Crystal Structure of S100A3 C30A+C68A double mutant expressed in insect cell
Descriptor: GLYCEROL, Protein S100-A3
Authors:Unno, M, Takahara, H, Kizawa, K.
Deposit date:2010-07-02
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Refined crystal structures of human Ca(2+)/Zn(2+)-binding S100A3 protein characterized by two disulfide bridges
J.Mol.Biol., 408, 2011
3NSO
DownloadVisualize
BU of 3nso by Molmil
Crystal Structure of S100A3 Protein Expressed in Insect Cell
Descriptor: Protein S100-A3
Authors:Unno, M, Takahara, H, Kizawa, K.
Deposit date:2010-07-02
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Refined crystal structures of human Ca(2+)/Zn(2+)-binding S100A3 protein characterized by two disulfide bridges
J.Mol.Biol., 408, 2011
2ZNS
DownloadVisualize
BU of 2zns by Molmil
Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with glutamate
Descriptor: GLUTAMIC ACID, Glutamate receptor, ionotropic kainate 1
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2008-05-01
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
2ZNU
DownloadVisualize
BU of 2znu by Molmil
Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with a novel selective agonist, neodysiherbaine A
Descriptor: (2R,3aR,6R,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6,7-dihydroxyhexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid, BETA-MERCAPTOETHANOL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2008-05-01
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
2ZNT
DownloadVisualize
BU of 2znt by Molmil
Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with a novel selective agonist, dysiherbaine
Descriptor: (2R,3aR,6S,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6-hydroxy-7-(methylamino)hexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid, BETA-MERCAPTOETHANOL, Glutamate receptor, ...
Authors:Unno, M, Sasaki, M, Ikeda-Saito, M.
Deposit date:2008-05-01
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Binding and Selectivity of the Marine Toxin Neodysiherbaine A and Its Synthetic Analogues to GluK1 and GluK2 Kainate Receptors.
J.Mol.Biol., 413, 2011
2Z6T
DownloadVisualize
BU of 2z6t by Molmil
Crystal structure of the ferric peroxo myoglobin
Descriptor: Myoglobin, PEROXIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Unno, M, Kusama, S, Chen, H, Shaik, S, Ikeda-Saito, M.
Deposit date:2007-08-08
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Characterization of the Fleeting Ferric Peroxo Species in Myoglobin: Experiment and Theory
J.Am.Chem.Soc., 129, 2007
2Z6S
DownloadVisualize
BU of 2z6s by Molmil
Crystal structure of the oxy myoglobin free from X-ray-induced photoreduction
Descriptor: Myoglobin, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Unno, M, Kusama, S, Chen, H, Shaik, S, Ikeda-Saito, M.
Deposit date:2007-08-08
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Characterization of the Fleeting Ferric Peroxo Species in Myoglobin: Experiment and Theory
J.Am.Chem.Soc., 129, 2007
7YL8
DownloadVisualize
BU of 7yl8 by Molmil
Neutron structure of Bacillus thermoproteolyticus Ferredoxin at room temperature
Descriptor: Ferredoxin, IRON/SULFUR CLUSTER
Authors:Unno, M, Wada, K, Kobayashi, K.
Deposit date:2022-07-25
Release date:2024-02-07
Method:NEUTRON DIFFRACTION (1.45 Å), X-RAY DIFFRACTION
Cite:Protonation/deprotonation-driven switch for the redox stability of the low-potential [4Fe-4S] ferredoxin
To Be Published

 

123>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon